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Explore HG002 comparison results

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Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 977 978 979 980 981 982 983 984 985 ... 1720 1721 » 49001-49050 / 86044 show all
gduggal-snapfb	INDEL	D6_15	lowcmp_SimpleRepeat_diTR_51to200	*	49.2494	39.3734	65.7385	28.0488	465	716	543	283	280	98.9399
gduggal-snapfb	INDEL	D6_15	lowcmp_SimpleRepeat_diTR_51to200	het	50.7551	35.1351	91.3793	30.4000	52	96	318	30	28	93.3333
gduggal-snapfb	INDEL	D6_15	lowcmp_SimpleRepeat_diTR_51to200	hetalt	47.3186	31.7661	92.7083	19.3277	277	595	89	7	6	85.7143
gduggal-snapfb	INDEL	D6_15	lowcmp_SimpleRepeat_diTR_51to200	homalt	50.0921	84.4720	35.6021	27.7883	136	25	136	246	246	100.0000
gduggal-snapfb	SNP	*	lowcmp_SimpleRepeat_diTR_51to200	*	4.2984	80.9524	2.2078	79.4447	34	8	34	1506	9	0.5976
gduggal-snapfb	SNP	*	lowcmp_SimpleRepeat_diTR_51to200	het	3.0372	74.0741	1.5504	75.3723	20	7	20	1270	4	0.3150
gduggal-snapfb	SNP	*	lowcmp_SimpleRepeat_diTR_51to200	hetalt		0.0000	0.0000	64.7727	0	0	0	31	1	3.2258
gduggal-snapfb	SNP	*	lowcmp_SimpleRepeat_diTR_51to200	homalt	11.9658	93.3333	6.3927	89.8892	14	1	14	205	4	1.9512
gduggal-bwaplat	INDEL	D6_15	lowcmp_SimpleRepeat_diTR_51to200	*	50.3713	34.4623	93.5632	71.0771	407	774	407	28	21	75.0000
gduggal-bwaplat	INDEL	D6_15	lowcmp_SimpleRepeat_diTR_51to200	het	53.3937	39.8649	80.8219	88.1107	59	89	59	14	7	50.0000
gduggal-bwaplat	INDEL	D6_15	lowcmp_SimpleRepeat_diTR_51to200	hetalt	48.6672	32.4541	97.2509	55.2995	283	589	283	8	8	100.0000
gduggal-bwaplat	INDEL	D6_15	lowcmp_SimpleRepeat_diTR_51to200	homalt	56.0345	40.3727	91.5493	70.2929	65	96	65	6	6	100.0000
gduggal-bwaplat	INDEL	C6_15	lowcmp_SimpleRepeat_diTR_51to200	*		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-bwaplat	INDEL	C6_15	lowcmp_SimpleRepeat_diTR_51to200	het		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-bwaplat	INDEL	C6_15	lowcmp_SimpleRepeat_diTR_51to200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-bwaplat	INDEL	C6_15	lowcmp_SimpleRepeat_diTR_51to200	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-bwaplat	INDEL	*	lowcmp_SimpleRepeat_diTR_51to200	*	53.6602	38.0295	91.1060	74.8783	799	1302	799	78	48	61.5385
gduggal-bwaplat	INDEL	*	lowcmp_SimpleRepeat_diTR_51to200	het	54.9072	42.2449	78.4091	85.8369	207	283	207	57	28	49.1228
gduggal-bwaplat	INDEL	*	lowcmp_SimpleRepeat_diTR_51to200	hetalt	51.2669	34.7444	97.7528	56.7121	435	817	435	10	10	100.0000
gduggal-bwaplat	INDEL	*	lowcmp_SimpleRepeat_diTR_51to200	homalt	59.5825	43.7326	93.4524	71.9533	157	202	157	11	10	90.9091
gduggal-bwaplat	INDEL	C1_5	lowcmp_SimpleRepeat_diTR_51to200	*		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-bwaplat	INDEL	C1_5	lowcmp_SimpleRepeat_diTR_51to200	het		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-bwaplat	INDEL	C1_5	lowcmp_SimpleRepeat_diTR_51to200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-bwaplat	INDEL	C1_5	lowcmp_SimpleRepeat_diTR_51to200	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-bwaplat	INDEL	D1_5	lowcmp_SimpleRepeat_diTR_51to200	*	37.5839	24.1033	85.2792	74.6461	168	529	168	29	9	31.0345
gduggal-bwaplat	INDEL	D1_5	lowcmp_SimpleRepeat_diTR_51to200	het	37.7551	27.4074	60.6557	81.1728	37	98	37	24	4	16.6667
gduggal-bwaplat	INDEL	D1_5	lowcmp_SimpleRepeat_diTR_51to200	hetalt	38.0952	23.6253	98.3051	64.2424	116	375	116	2	2	100.0000
gduggal-bwaplat	INDEL	D1_5	lowcmp_SimpleRepeat_diTR_51to200	homalt	33.7079	21.1268	83.3333	85.3659	15	56	15	3	3	100.0000
gduggal-bwaplat	INDEL	C16_PLUS	lowcmp_SimpleRepeat_diTR_51to200	*		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-bwaplat	INDEL	C16_PLUS	lowcmp_SimpleRepeat_diTR_51to200	het		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-bwaplat	INDEL	C16_PLUS	lowcmp_SimpleRepeat_diTR_51to200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-bwaplat	INDEL	C16_PLUS	lowcmp_SimpleRepeat_diTR_51to200	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-bwaplat	INDEL	D16_PLUS	lowcmp_SimpleRepeat_diTR_51to200	*	67.6032	52.3810	95.2970	70.8303	385	350	385	19	19	100.0000
gduggal-bwaplat	INDEL	D16_PLUS	lowcmp_SimpleRepeat_diTR_51to200	het	66.1871	54.4379	84.4037	84.9448	92	77	92	17	17	100.0000
gduggal-bwaplat	INDEL	D16_PLUS	lowcmp_SimpleRepeat_diTR_51to200	hetalt	65.8537	49.2027	99.5392	51.5625	216	223	216	1	1	100.0000
gduggal-bwaplat	INDEL	D16_PLUS	lowcmp_SimpleRepeat_diTR_51to200	homalt	75.1220	60.6299	98.7179	63.3803	77	50	77	1	1	100.0000
gduggal-snapfb	INDEL	C6_15	lowcmp_SimpleRepeat_diTR_51to200	*		0.0000		100.0000	0	0	0	0	0
gduggal-snapfb	INDEL	C6_15	lowcmp_SimpleRepeat_diTR_51to200	het		0.0000		100.0000	0	0	0	0	0
gduggal-snapfb	INDEL	C6_15	lowcmp_SimpleRepeat_diTR_51to200	hetalt		0.0000		100.0000	0	0	0	0	0
gduggal-snapfb	INDEL	C6_15	lowcmp_SimpleRepeat_diTR_51to200	homalt		0.0000		100.0000	0	0	0	0	0
gduggal-snapfb	INDEL	D16_PLUS	lowcmp_SimpleRepeat_diTR_51to200	*		0.0000	0.0000	0.0000	0	735	0	0	0
gduggal-snapfb	INDEL	D16_PLUS	lowcmp_SimpleRepeat_diTR_51to200	het		0.0000	0.0000	0.0000	0	169	0	0	0
gduggal-snapfb	INDEL	D16_PLUS	lowcmp_SimpleRepeat_diTR_51to200	hetalt		0.0000	0.0000	0.0000	0	439	0	0	0
gduggal-snapfb	INDEL	D16_PLUS	lowcmp_SimpleRepeat_diTR_51to200	homalt		0.0000	0.0000	0.0000	0	127	0	0	0
gduggal-snapfb	INDEL	*	lowcmp_SimpleRepeat_diTR_51to200	*	39.2277	31.6516	51.5719	45.1410	665	1436	853	801	448	55.9301
gduggal-snapfb	INDEL	*	lowcmp_SimpleRepeat_diTR_51to200	het	34.6127	23.8776	62.8853	50.2149	117	373	510	301	47	15.6146
gduggal-snapfb	INDEL	*	lowcmp_SimpleRepeat_diTR_51to200	hetalt	40.2163	27.6358	73.8220	36.9637	346	906	141	50	12	24.0000
gduggal-snapfb	INDEL	*	lowcmp_SimpleRepeat_diTR_51to200	homalt	39.9604	56.2674	30.9816	39.7969	202	157	202	450	389	86.4444
gduggal-bwavard	SNP	ti	lowcmp_SimpleRepeat_diTR_51to200	*	57.1429	62.5000	52.6316	97.1168	10	6	10	9	0	0.0000
gduggal-bwavard	SNP	ti	lowcmp_SimpleRepeat_diTR_51to200	het	41.6667	50.0000	35.7143	97.5567	5	5	5	9	0	0.0000

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