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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 94 95 96 97 98 99 100 101 102 ... 1720 1721 » 4851-4900 / 86044 show all
ckim-vqsr	INDEL	D16_PLUS	segdup	hetalt	87.5000	77.7778	100.0000	92.8000	7	2	9	0	0
ckim-vqsr	INDEL	D16_PLUS	segdup	homalt	96.0000	100.0000	92.3077	96.5699	12	0	12	1	1	100.0000
ckim-vqsr	INDEL	D1_5	segdup	*	99.1399	99.1840	99.0958	96.1257	1094	9	1096	10	2	20.0000
ckim-vqsr	INDEL	D1_5	segdup	het	98.9178	98.9884	98.8473	96.6564	685	7	686	8	0	0.0000
ckim-vqsr	INDEL	D1_5	segdup	hetalt	98.0392	96.1538	100.0000	95.6336	50	2	51	0	0
ckim-vqsr	INDEL	D1_5	segdup	homalt	99.7222	100.0000	99.4460	94.5493	359	0	359	2	2	100.0000
ckim-vqsr	INDEL	C6_15	segdup	*		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-vqsr	INDEL	C6_15	segdup	het		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-vqsr	INDEL	C6_15	segdup	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-vqsr	INDEL	C6_15	segdup	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapfb	INDEL	C1_5	segdup	*		0.0000		100.0000	0	0	0	0	0
gduggal-snapfb	INDEL	C1_5	segdup	het		0.0000		100.0000	0	0	0	0	0
gduggal-snapfb	INDEL	C1_5	segdup	hetalt		0.0000		100.0000	0	0	0	0	0
gduggal-snapfb	INDEL	C1_5	segdup	homalt		0.0000		100.0000	0	0	0	0	0
gduggal-snapfb	INDEL	C6_15	segdup	*		0.0000		100.0000	0	0	0	0	0
gduggal-snapfb	INDEL	C6_15	segdup	het		0.0000		100.0000	0	0	0	0	0
gduggal-snapfb	INDEL	C6_15	segdup	hetalt		0.0000		100.0000	0	0	0	0	0
gduggal-snapfb	INDEL	C6_15	segdup	homalt		0.0000		100.0000	0	0	0	0	0
gduggal-snapfb	INDEL	C16_PLUS	segdup	*		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapfb	INDEL	C16_PLUS	segdup	het		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapfb	INDEL	C16_PLUS	segdup	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapfb	INDEL	C16_PLUS	segdup	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-bwavard	INDEL	I6_15	segdup	*	68.6994	65.1429	72.6667	92.8605	114	61	109	41	40	97.5610
gduggal-bwavard	INDEL	I6_15	segdup	het	78.4212	97.5904	65.5462	93.4795	81	2	78	41	40	97.5610
gduggal-bwavard	INDEL	I6_15	segdup	hetalt		0.0000	0.0000	0.0000	0	45	0	0	0
gduggal-bwavard	INDEL	I6_15	segdup	homalt	82.5000	70.2128	100.0000	88.7681	33	14	31	0	0
gduggal-bwavard	SNP	tv	segdup	*	98.0164	97.1871	98.8601	94.3820	8292	240	8239	95	34	35.7895
gduggal-bwavard	SNP	tv	segdup	het	97.8517	97.1439	98.5698	95.5379	5136	151	5100	74	15	20.2703
gduggal-bwavard	SNP	tv	segdup	hetalt		0.0000	0.0000	0.0000	0	7	0	0	0
gduggal-bwavard	SNP	tv	segdup	homalt	98.3926	97.4676	99.3354	90.2442	3156	82	3139	21	19	90.4762
gduggal-snapfb	INDEL	*	segdup	*	93.0343	91.0407	95.1171	94.2770	2327	229	2396	123	43	34.9593
gduggal-snapfb	INDEL	*	segdup	het	92.4787	90.9277	94.0836	94.1056	1333	133	1463	92	26	28.2609
gduggal-snapfb	INDEL	*	segdup	hetalt	81.3718	74.6154	89.4737	97.2915	97	33	34	4	2	50.0000
gduggal-snapfb	INDEL	*	segdup	homalt	95.2260	93.4375	97.0842	94.2949	897	63	899	27	15	55.5556
gduggal-bwavard	SNP	*	segdup	*	98.3638	97.5737	99.1668	93.3246	27386	681	27135	228	70	30.7018
gduggal-bwavard	SNP	*	segdup	het	98.1974	97.4649	98.9410	94.6418	16878	439	16724	179	23	12.8492
gduggal-bwavard	SNP	*	segdup	hetalt		0.0000	0.0000	0.0000	0	7	0	0	0
gduggal-bwavard	SNP	*	segdup	homalt	98.6646	97.8125	99.5315	88.9251	10508	235	10411	49	47	95.9184
gduggal-bwavard	SNP	ti	segdup	*	98.4790	97.7325	99.2369	92.8031	19094	443	18987	146	43	29.4521
gduggal-bwavard	SNP	ti	segdup	het	98.3107	97.6060	99.0256	94.1945	11742	288	11687	115	13	11.3043
gduggal-bwavard	SNP	ti	segdup	hetalt		0.0000	0.0000	0.0000	0	2	0	0	0
gduggal-bwavard	SNP	ti	segdup	homalt	98.7626	97.9614	99.5771	88.2815	7352	153	7300	31	30	96.7742
gduggal-snapfb	SNP	*	segdup	*	98.9601	99.4941	98.4319	91.5712	27925	142	27933	445	34	7.6405
gduggal-snapfb	SNP	*	segdup	het	98.5769	99.3590	97.8069	92.1233	17206	111	17215	386	16	4.1451
gduggal-snapfb	SNP	*	segdup	hetalt	77.7778	100.0000	63.6364	96.7930	7	0	7	4	1	25.0000
gduggal-snapfb	SNP	*	segdup	homalt	99.6002	99.7114	99.4891	90.4625	10712	31	10711	55	17	30.9091
gduggal-snapfb	SNP	ti	segdup	*	99.1459	99.5137	98.7809	90.9477	19442	95	19446	240	23	9.5833
gduggal-snapfb	SNP	ti	segdup	het	98.8224	99.3766	98.2744	91.5559	11955	75	11960	210	13	6.1905
gduggal-snapfb	SNP	ti	segdup	hetalt	50.0000	100.0000	33.3333	97.3214	2	0	2	4	1	25.0000
gduggal-snapfb	SNP	ti	segdup	homalt	99.6936	99.7335	99.6538	89.7294	7485	20	7484	26	9	34.6154

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