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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 884 885 886 887 888 889 890 891 892 ... 1720 1721 » 44351-44400 / 86044 show all
eyeh-varpipe	INDEL	D1_5	lowcmp_SimpleRepeat_quadTR_11to50	homalt	92.1748	98.3088	86.7613	48.1654	3604	62	4155	634	622	98.1073
eyeh-varpipe	INDEL	D6_15	lowcmp_SimpleRepeat_quadTR_11to50	*	77.6919	72.9319	83.1165	45.6084	2689	998	2939	597	575	96.3149
eyeh-varpipe	INDEL	D6_15	lowcmp_SimpleRepeat_quadTR_11to50	het	90.6327	87.6737	93.7984	45.3197	1451	204	1452	96	90	93.7500
eyeh-varpipe	INDEL	D6_15	lowcmp_SimpleRepeat_quadTR_11to50	hetalt	55.5323	39.1709	95.3662	55.2807	463	719	638	31	30	96.7742
eyeh-varpipe	INDEL	D6_15	lowcmp_SimpleRepeat_quadTR_11to50	homalt	75.4613	91.1765	64.3669	39.3284	775	75	849	470	455	96.8085
ckim-vqsr	SNP	ti	lowcmp_SimpleRepeat_quadTR_11to50	*	99.3478	99.3571	99.3386	42.1628	10663	69	10663	71	1	1.4085
ckim-vqsr	SNP	ti	lowcmp_SimpleRepeat_quadTR_11to50	het	99.2237	99.4958	98.9530	45.8387	6710	34	6710	71	1	1.4085
ckim-vqsr	SNP	ti	lowcmp_SimpleRepeat_quadTR_11to50	hetalt	100.0000	100.0000	100.0000	85.7143	1	0	1	0	0
ckim-vqsr	SNP	ti	lowcmp_SimpleRepeat_quadTR_11to50	homalt	99.5591	99.1221	100.0000	34.4828	3952	35	3952	0	0
dgrover-gatk	INDEL	C16_PLUS	lowcmp_SimpleRepeat_quadTR_11to50	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	C1_5	lowcmp_SimpleRepeat_quadTR_11to50	*		0.0000	0.0000	0.0000	0	1	0	0	0
dgrover-gatk	INDEL	C1_5	lowcmp_SimpleRepeat_quadTR_11to50	het		0.0000	0.0000	0.0000	0	1	0	0	0
dgrover-gatk	INDEL	C1_5	lowcmp_SimpleRepeat_quadTR_11to50	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	C1_5	lowcmp_SimpleRepeat_quadTR_11to50	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	C6_15	lowcmp_SimpleRepeat_quadTR_11to50	*		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	C6_15	lowcmp_SimpleRepeat_quadTR_11to50	het		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	C6_15	lowcmp_SimpleRepeat_quadTR_11to50	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	C6_15	lowcmp_SimpleRepeat_quadTR_11to50	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	D16_PLUS	lowcmp_SimpleRepeat_quadTR_11to50	*	99.0605	98.9572	99.1641	72.4921	949	10	949	8	6	75.0000
dgrover-gatk	INDEL	D16_PLUS	lowcmp_SimpleRepeat_quadTR_11to50	het	99.3640	99.2519	99.4764	81.8355	398	3	380	2	1	50.0000
dgrover-gatk	INDEL	D16_PLUS	lowcmp_SimpleRepeat_quadTR_11to50	hetalt	98.4903	97.8659	99.1228	38.1555	321	7	339	3	3	100.0000
dgrover-gatk	INDEL	D16_PLUS	lowcmp_SimpleRepeat_quadTR_11to50	homalt	99.3521	100.0000	98.7124	71.6889	230	0	230	3	2	66.6667
dgrover-gatk	INDEL	*	lowcmp_SimpleRepeat_quadTR_11to50	*	99.5315	99.4915	99.5716	59.7014	19761	101	19754	85	47	55.2941
dgrover-gatk	INDEL	*	lowcmp_SimpleRepeat_quadTR_11to50	het	99.5450	99.5769	99.5131	63.1488	11061	47	11036	54	17	31.4815
dgrover-gatk	INDEL	*	lowcmp_SimpleRepeat_quadTR_11to50	hetalt	98.9101	98.0611	99.7739	42.7400	2630	52	2648	6	6	100.0000
dgrover-gatk	INDEL	*	lowcmp_SimpleRepeat_quadTR_11to50	homalt	99.7781	99.9671	99.5898	57.9684	6070	2	6070	25	24	96.0000
dgrover-gatk	INDEL	C16_PLUS	lowcmp_SimpleRepeat_quadTR_11to50	*		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	C16_PLUS	lowcmp_SimpleRepeat_quadTR_11to50	het		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	C16_PLUS	lowcmp_SimpleRepeat_quadTR_11to50	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-vqsr	SNP	*	lowcmp_SimpleRepeat_quadTR_11to50	*	99.0811	99.3345	98.8289	41.8039	18062	121	18059	214	2	0.9346
ckim-vqsr	SNP	*	lowcmp_SimpleRepeat_quadTR_11to50	het	98.8227	99.5014	98.1531	44.9941	11376	57	11373	214	2	0.9346
ckim-vqsr	SNP	*	lowcmp_SimpleRepeat_quadTR_11to50	hetalt	100.0000	100.0000	100.0000	66.6667	5	0	5	0	0
ckim-vqsr	SNP	*	lowcmp_SimpleRepeat_quadTR_11to50	homalt	99.5233	99.0511	100.0000	35.2554	6681	64	6681	0	0
ckim-vqsr	SNP	tv	lowcmp_SimpleRepeat_quadTR_11to50	*	98.6992	99.3022	98.1034	41.3093	7400	52	7397	143	1	0.6993
ckim-vqsr	SNP	tv	lowcmp_SimpleRepeat_quadTR_11to50	het	98.2513	99.5095	97.0246	43.7566	4666	23	4663	143	1	0.6993
ckim-vqsr	SNP	tv	lowcmp_SimpleRepeat_quadTR_11to50	hetalt	100.0000	100.0000	100.0000	66.6667	5	0	5	0	0
ckim-vqsr	SNP	tv	lowcmp_SimpleRepeat_quadTR_11to50	homalt	99.4715	98.9485	100.0000	36.3424	2729	29	2729	0	0
jli-custom	INDEL	I16_PLUS	lowcmp_SimpleRepeat_quadTR_11to50	het	94.7291	91.0714	98.6928	74.8768	153	15	151	2	1	50.0000
jli-custom	INDEL	I16_PLUS	lowcmp_SimpleRepeat_quadTR_11to50	hetalt	97.3607	94.8571	100.0000	64.1026	166	9	168	0	0
jli-custom	INDEL	I16_PLUS	lowcmp_SimpleRepeat_quadTR_11to50	homalt	98.8764	97.7778	100.0000	81.5126	44	1	44	0	0
jli-custom	INDEL	I1_5	lowcmp_SimpleRepeat_quadTR_11to50	*	98.6673	97.7687	99.5826	65.8986	3812	87	3817	16	9	56.2500
jli-custom	INDEL	I1_5	lowcmp_SimpleRepeat_quadTR_11to50	het	98.9669	98.4733	99.4656	72.6845	1677	26	1675	9	2	22.2222
jli-custom	INDEL	I1_5	lowcmp_SimpleRepeat_quadTR_11to50	hetalt	97.3218	94.7834	100.0000	40.0222	1072	59	1079	0	0
jli-custom	INDEL	I1_5	lowcmp_SimpleRepeat_quadTR_11to50	homalt	99.5785	99.8122	99.3458	67.3382	1063	2	1063	7	7	100.0000
jli-custom	INDEL	I6_15	lowcmp_SimpleRepeat_quadTR_11to50	*	98.1944	96.7449	99.6880	59.3016	1278	43	1278	4	3	75.0000
jli-custom	INDEL	I6_15	lowcmp_SimpleRepeat_quadTR_11to50	het	98.1373	96.5517	99.7758	69.8852	448	16	445	1	0	0.0000
jli-custom	INDEL	I6_15	lowcmp_SimpleRepeat_quadTR_11to50	hetalt	97.8486	95.7878	100.0000	40.6160	614	27	617	0	0
jli-custom	INDEL	I6_15	lowcmp_SimpleRepeat_quadTR_11to50	homalt	99.3103	100.0000	98.6301	65.2381	216	0	216	3	3	100.0000
jli-custom	INDEL	D6_15	lowcmp_SimpleRepeat_quadTR_11to50	*	99.1826	98.7253	99.6441	48.7010	3640	47	3640	13	10	76.9231
jli-custom	INDEL	D6_15	lowcmp_SimpleRepeat_quadTR_11to50	het	99.2109	98.7915	99.6339	57.3510	1635	20	1633	6	3	50.0000

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