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Explore HG002 comparison results
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EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
43951-44000 / 86044 show all
ciseli-customINDELI1_5lowcmp_SimpleRepeat_quadTR_11to50homalt
81.2972
84.9765
77.9232
58.9542
905160893253210
83.0040
ciseli-customSNPtvlowcmp_SimpleRepeat_quadTR_11to50*
87.2844
97.5309
78.9862
44.6999
72681847277193672
3.7190
ciseli-customSNPtvlowcmp_SimpleRepeat_quadTR_11to50het
82.5695
96.6091
72.0927
44.6474
45301594544175924
1.3644
ciseli-customSNPtvlowcmp_SimpleRepeat_quadTR_11to50hetalt
61.5385
80.0000
50.0000
50.0000
41441
25.0000
ciseli-customSNPtvlowcmp_SimpleRepeat_quadTR_11to50homalt
96.5171
99.1298
94.0386
44.7974
273424272917347
27.1676
ciseli-customSNP*lowcmp_SimpleRepeat_quadTR_11to50*
87.9780
97.7891
79.9560
49.1916
17781402178154466191
4.2768
ciseli-customSNP*lowcmp_SimpleRepeat_quadTR_11to50het
83.4518
96.9037
73.2793
50.2099
1107935411126405761
1.5036
ciseli-customSNP*lowcmp_SimpleRepeat_quadTR_11to50hetalt
61.5385
80.0000
50.0000
50.0000
41441
25.0000
ciseli-customSNP*lowcmp_SimpleRepeat_quadTR_11to50homalt
96.7305
99.3032
94.2877
46.8635
6698476685405129
31.8519
ciseli-customSNPtilowcmp_SimpleRepeat_quadTR_11to50*
88.4231
97.9687
80.5725
52.0129
10514218105842552124
4.8589
ciseli-customSNPtilowcmp_SimpleRepeat_quadTR_11to50het
84.0742
97.1085
74.1248
53.6075
65491956606230639
1.6912
ciseli-customSNPtilowcmp_SimpleRepeat_quadTR_11to50hetalt
40.0000
100.0000
25.0000
50.0000
10131
33.3333
ciseli-customSNPtilowcmp_SimpleRepeat_quadTR_11to50homalt
96.7631
99.4231
94.2417
48.2590
396423397724384
34.5679
ciseli-customINDELI6_15lowcmp_SimpleRepeat_quadTR_11to50*
26.6407
17.5625
55.1471
66.3088
2321089225183170
92.8962
ciseli-customINDELI6_15lowcmp_SimpleRepeat_quadTR_11to50het
38.9082
26.7241
71.5116
73.2919
1243401234941
83.6735
ciseli-customINDELI6_15lowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
0.7800
0.0000
0.0000
5636000
ciseli-customINDELI6_15lowcmp_SimpleRepeat_quadTR_11to50homalt
45.3431
47.6852
43.2203
58.3774
103113102134129
96.2687
ckim-dragenINDEL*lowcmp_SimpleRepeat_quadTR_11to50*
99.4504
99.3304
99.5707
59.9377
19729133197138564
75.2941
ckim-dragenINDEL*lowcmp_SimpleRepeat_quadTR_11to50het
99.5579
99.4508
99.6651
63.3945
1104761110123716
43.2432
ckim-dragenINDEL*lowcmp_SimpleRepeat_quadTR_11to50hetalt
98.7395
97.7629
99.7358
42.4788
262260264377
100.0000
ckim-dragenINDEL*lowcmp_SimpleRepeat_quadTR_11to50homalt
99.5645
99.8024
99.3278
58.3031
60601260584141
100.0000
ciseli-customINDELD6_15lowcmp_SimpleRepeat_quadTR_11to50*
60.2687
57.5149
63.2995
49.8576
2120156621181228856
69.7068
ciseli-customINDELD6_15lowcmp_SimpleRepeat_quadTR_11to50het
76.2936
79.9879
72.9255
50.4089
13233311371509198
38.8998
ciseli-customINDELD6_15lowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
3.7225
0.0000
0.0000
441138000
ciseli-customINDELD6_15lowcmp_SimpleRepeat_quadTR_11to50homalt
64.6970
88.5882
50.9550
49.1325
75397747719658
91.5160
ciseli-customINDELC16_PLUSlowcmp_SimpleRepeat_quadTR_11to50*
0.0000
0.0000
14.2857
95.9064
00162
33.3333
ciseli-customINDELC16_PLUSlowcmp_SimpleRepeat_quadTR_11to50het
0.0000
100.0000
00000
ciseli-customINDELC16_PLUSlowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
0.0000
0.0000
00000
ciseli-customINDELC16_PLUSlowcmp_SimpleRepeat_quadTR_11to50homalt
0.0000
0.0000
14.2857
95.3642
00162
33.3333
ciseli-customINDELC6_15lowcmp_SimpleRepeat_quadTR_11to50*
0.0000
0.0000
13.0435
94.6009
003207
35.0000
ciseli-customINDELC6_15lowcmp_SimpleRepeat_quadTR_11to50het
0.0000
0.0000
50.0000
98.2456
00110
0.0000
ciseli-customINDELC6_15lowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
0.0000
0.0000
00000
ciseli-customINDELC6_15lowcmp_SimpleRepeat_quadTR_11to50homalt
0.0000
0.0000
9.5238
93.2692
002197
36.8421
ciseli-customINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_11to50*
51.8014
43.6913
63.6086
59.7043
419540416238213
89.4958
ciseli-customINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_11to50het
63.3990
50.8728
84.1085
55.4404
2041972174132
78.0488
ciseli-customINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
4.8780
0.0000
0.0000
16312000
ciseli-customINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_11to50homalt
63.5783
86.5217
50.2525
62.0690
19931199197181
91.8782
ciseli-customINDELD1_5lowcmp_SimpleRepeat_quadTR_11to50*
78.1562
80.3015
76.1225
51.8771
95352339949429781387
46.5749
ciseli-customINDELD1_5lowcmp_SimpleRepeat_quadTR_11to50het
83.3290
92.2710
75.9669
53.2043
619651962461976523
26.4676
ciseli-customINDELD1_5lowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
4.0857
0.0000
0.0000
611432000
ciseli-customINDELD1_5lowcmp_SimpleRepeat_quadTR_11to50homalt
82.4109
89.4163
76.4235
49.0835
327838832481002864
86.2275
ciseli-customINDELC1_5lowcmp_SimpleRepeat_quadTR_11to50*
0.0000
0.0000
21.6981
90.8066
01238319
22.8916
ciseli-customINDELC1_5lowcmp_SimpleRepeat_quadTR_11to50het
0.0000
0.0000
22.2222
96.8085
01271
14.2857
ciseli-customINDELC1_5lowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
0.0000
0.0000
00000
ciseli-customINDELC1_5lowcmp_SimpleRepeat_quadTR_11to50homalt
0.0000
0.0000
21.6495
88.8634
00217618
23.6842
cchapple-customSNPtvlowcmp_SimpleRepeat_quadTR_11to50*
98.3439
99.7585
96.9689
38.4203
74341874542333
1.2876
cchapple-customSNPtvlowcmp_SimpleRepeat_quadTR_11to50het
97.4327
99.6801
95.2844
41.6647
46741547082333
1.2876
cchapple-customSNPtvlowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
100.0000
0.0000
0.0000
50000
cchapple-customSNPtvlowcmp_SimpleRepeat_quadTR_11to50homalt
99.9456
99.8912
100.0000
31.5724
27553274600
ciseli-customINDEL*lowcmp_SimpleRepeat_quadTR_11to50*
73.3978
74.0332
72.7731
56.7536
1470351571471455053111
56.5123