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Explore HG002 comparison results
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EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
42951-43000 / 86044 show all
hfeng-pmm2INDEL*lowcmp_SimpleRepeat_quadTR_11to50hetalt
98.7925
97.6137
100.0000
42.7983
261864263700
hfeng-pmm2INDEL*lowcmp_SimpleRepeat_quadTR_11to50homalt
99.7285
99.8188
99.6383
55.6923
60611160612222
100.0000
hfeng-pmm2INDELC16_PLUSlowcmp_SimpleRepeat_quadTR_11to50*
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELC16_PLUSlowcmp_SimpleRepeat_quadTR_11to50het
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELC16_PLUSlowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm1SNP*lowcmp_SimpleRepeat_quadTR_11to50*
99.5502
99.2026
99.9003
37.1632
1803814518035183
16.6667
hfeng-pmm1SNP*lowcmp_SimpleRepeat_quadTR_11to50het
99.3051
98.7492
99.8673
37.3573
1129014311287150
0.0000
hfeng-pmm1SNP*lowcmp_SimpleRepeat_quadTR_11to50hetalt
90.9091
100.0000
83.3333
66.6667
50511
100.0000
hfeng-pmm1SNP*lowcmp_SimpleRepeat_quadTR_11to50homalt
99.9703
99.9703
99.9703
36.7854
67432674322
100.0000
hfeng-pmm1INDELI16_PLUSlowcmp_SimpleRepeat_quadTR_11to50*
98.3182
97.9381
98.7013
74.2475
380838051
20.0000
hfeng-pmm1INDELI16_PLUSlowcmp_SimpleRepeat_quadTR_11to50het
98.2107
98.8095
97.6190
76.5363
166216440
0.0000
hfeng-pmm1INDELI16_PLUSlowcmp_SimpleRepeat_quadTR_11to50hetalt
98.2558
96.5714
100.0000
67.1154
169617100
hfeng-pmm1INDELI16_PLUSlowcmp_SimpleRepeat_quadTR_11to50homalt
98.9011
100.0000
97.8261
82.2394
4504511
100.0000
hfeng-pmm1INDELI6_15lowcmp_SimpleRepeat_quadTR_11to50*
98.5452
97.4262
99.6902
60.4957
128734128742
50.0000
hfeng-pmm1INDELI6_15lowcmp_SimpleRepeat_quadTR_11to50het
98.3628
97.1983
99.5556
70.8549
4511344820
0.0000
hfeng-pmm1INDELI6_15lowcmp_SimpleRepeat_quadTR_11to50hetalt
98.3347
96.7239
100.0000
43.9244
6202162300
hfeng-pmm1INDELI6_15lowcmp_SimpleRepeat_quadTR_11to50homalt
99.5392
100.0000
99.0826
64.4372
216021622
100.0000
gduggal-snapvardINDELC6_15lowcmp_SimpleRepeat_quadTR_11to50*
0.0000
0.0000
31.5789
81.2500
00367813
16.6667
gduggal-snapvardINDELC6_15lowcmp_SimpleRepeat_quadTR_11to50het
0.0000
0.0000
30.2752
80.5357
00337613
17.1053
gduggal-snapvardINDELC6_15lowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELC6_15lowcmp_SimpleRepeat_quadTR_11to50homalt
0.0000
0.0000
60.0000
89.5833
00320
0.0000
gduggal-snapvardINDELD6_15lowcmp_SimpleRepeat_quadTR_11to50*
55.4366
50.8272
60.9654
44.0200
1874181320461310988
75.4198
gduggal-snapvardINDELD6_15lowcmp_SimpleRepeat_quadTR_11to50het
66.3215
73.5347
60.3969
44.0745
121743819781297975
75.1735
gduggal-snapvardINDELD6_15lowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
47.3773
0.0000
0.0000
560622000
gduggal-snapvardINDELD6_15lowcmp_SimpleRepeat_quadTR_11to50homalt
20.0923
11.4118
83.9506
41.7266
97753681313
100.0000
gduggal-snapvardINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_11to50*
0.0000
0.0000
28.0220
59.5556
03885113141
31.2977
gduggal-snapvardINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_11to50het
0.0000
0.0000
27.3743
59.8655
01684913040
30.7692
gduggal-snapvardINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
0.0000
0.0000
0175000
gduggal-snapvardINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_11to50homalt
0.0000
0.0000
66.6667
25.0000
045211
100.0000
gduggal-snapvardINDELI1_5lowcmp_SimpleRepeat_quadTR_11to50*
69.6175
73.0888
66.4609
58.6501
28491049409220651377
66.6828
gduggal-snapvardINDELI1_5lowcmp_SimpleRepeat_quadTR_11to50het
74.2485
93.1298
61.7328
60.2144
1586117329920451364
66.6993
gduggal-snapvardINDELI1_5lowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
55.8407
0.0000
0.0000
631499000
gduggal-snapvardINDELI1_5lowcmp_SimpleRepeat_quadTR_11to50homalt
73.7913
59.3427
97.5400
44.2387
6324337932013
65.0000
gduggal-snapvardINDELI6_15lowcmp_SimpleRepeat_quadTR_11to50*
41.1383
38.1818
44.5910
44.9927
5048168451050781
74.3810
gduggal-snapvardINDELI6_15lowcmp_SimpleRepeat_quadTR_11to50het
52.7742
65.9483
43.9872
44.8571
3061588231048780
74.4275
gduggal-snapvardINDELI6_15lowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
28.7500
0.0000
0.0000
184456000
gduggal-snapvardINDELI6_15lowcmp_SimpleRepeat_quadTR_11to50homalt
12.1069
6.4815
91.6667
53.8462
142022221
50.0000
gduggal-snapvardINDELD1_5lowcmp_SimpleRepeat_quadTR_11to50*
71.3186
75.9474
67.2215
47.6957
901828561223759674608
77.2247
gduggal-snapvardINDELD1_5lowcmp_SimpleRepeat_quadTR_11to50het
76.5644
95.3537
63.9609
48.2339
64033121048059054553
77.1041
gduggal-snapvardINDELD1_5lowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
62.1567
0.0000
0.0000
928565000
gduggal-snapvardINDELD1_5lowcmp_SimpleRepeat_quadTR_11to50homalt
62.3368
46.0175
96.5915
42.2906
1687197917576255
88.7097
gduggal-snapvardINDELC1_5lowcmp_SimpleRepeat_quadTR_11to50*
38.6341
100.0000
23.9420
83.0324
1019862944
6.9952
gduggal-snapvardINDELC1_5lowcmp_SimpleRepeat_quadTR_11to50het
35.0259
100.0000
21.2312
82.4631
1016962743
6.8581
gduggal-snapvardINDELC1_5lowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELC1_5lowcmp_SimpleRepeat_quadTR_11to50homalt
0.0000
0.0000
93.5484
90.7463
002921
50.0000
gduggal-snapvardINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_11to50*
4.6119
2.5026
29.3478
74.2297
24935276539
60.0000
gduggal-snapvardINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_11to50het
5.8388
3.2419
29.3478
73.4870
13388276539
60.0000
gduggal-snapvardINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
3.3537
0.0000
0.0000
11317000
gduggal-snapvardINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_11to50homalt
0.0000
100.0000
0230000
hfeng-pmm1INDEL*lowcmp_SimpleRepeat_quadTR_11to50*
99.2458
98.7161
99.7811
57.1497
19607255196004325
58.1395