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Explore HG002 comparison results
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EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
42901-42950 / 86044 show all
ghariani-varprowlINDELI1_5lowcmp_SimpleRepeat_quadTR_11to50*
72.7782
64.6063
83.3167
68.8822
251913802512503427
84.8907
ghariani-varprowlINDELI1_5lowcmp_SimpleRepeat_quadTR_11to50het
86.9441
95.3611
79.8924
72.5785
1624791633411364
88.5645
ghariani-varprowlINDELI1_5lowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
1.5915
0.0000
0.0000
181113000
ghariani-varprowlINDELI1_5lowcmp_SimpleRepeat_quadTR_11to50homalt
86.2429
82.3474
90.5252
56.5548
8771888799263
68.4783
gduggal-snapplatINDELI1_5lowcmp_SimpleRepeat_quadTR_11to50*
32.5229
33.1367
31.9314
80.3989
129226071321281699
3.5156
gduggal-snapplatINDELI1_5lowcmp_SimpleRepeat_quadTR_11to50het
24.5228
33.9401
19.1964
80.6408
5781125602253412
0.4736
gduggal-snapplatINDELI1_5lowcmp_SimpleRepeat_quadTR_11to50hetalt
40.4600
27.3210
77.9449
70.7692
3098223118869
78.4091
gduggal-snapplatINDELI1_5lowcmp_SimpleRepeat_quadTR_11to50homalt
48.7196
38.0282
67.7741
83.0040
40566040819418
9.2784
gduggal-snapplatSNPtilowcmp_SimpleRepeat_quadTR_11to50*
90.3474
85.5479
95.7174
70.9701
91811551918641154
13.1387
gduggal-snapplatSNPtilowcmp_SimpleRepeat_quadTR_11to50het
89.2479
85.0979
93.8235
76.4116
57391005574237840
10.5820
gduggal-snapplatSNPtilowcmp_SimpleRepeat_quadTR_11to50hetalt
100.0000
100.0000
100.0000
87.5000
10100
gduggal-snapplatSNPtilowcmp_SimpleRepeat_quadTR_11to50homalt
92.2399
86.3055
99.0506
51.0836
344154634433314
42.4242
gduggal-snapplatSNPtvlowcmp_SimpleRepeat_quadTR_11to50*
81.2213
71.4171
94.1457
64.2321
53222130533933230
9.0361
gduggal-snapplatSNPtvlowcmp_SimpleRepeat_quadTR_11to50het
79.5706
70.3775
91.5264
68.8371
33001389331630718
5.8632
gduggal-snapplatSNPtvlowcmp_SimpleRepeat_quadTR_11to50hetalt
88.8889
80.0000
100.0000
71.4286
41400
gduggal-snapplatSNPtvlowcmp_SimpleRepeat_quadTR_11to50homalt
84.0660
73.1690
98.7769
51.5065
201874020192512
48.0000
gduggal-snapplatSNP*lowcmp_SimpleRepeat_quadTR_11to50*
86.7685
79.7558
95.1333
68.7830
1450236811452474384
11.3055
gduggal-snapplatSNP*lowcmp_SimpleRepeat_quadTR_11to50het
85.4527
79.0606
92.9693
74.0678
90392394905868558
8.4672
gduggal-snapplatSNP*lowcmp_SimpleRepeat_quadTR_11to50hetalt
88.8889
80.0000
100.0000
71.4286
41400
gduggal-snapplatSNP*lowcmp_SimpleRepeat_quadTR_11to50homalt
89.0395
80.9340
98.9493
51.2411
5459128654625826
44.8276
gduggal-snapvardINDELC16_PLUSlowcmp_SimpleRepeat_quadTR_11to50*
0.0000
0.0000
25.0000
74.4681
00390
0.0000
gduggal-snapvardINDELC16_PLUSlowcmp_SimpleRepeat_quadTR_11to50het
0.0000
0.0000
25.0000
73.9130
00390
0.0000
gduggal-snapvardINDELC16_PLUSlowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELC16_PLUSlowcmp_SimpleRepeat_quadTR_11to50homalt
0.0000
100.0000
00000
gduggal-snapplatINDELI6_15lowcmp_SimpleRepeat_quadTR_11to50*
25.7297
17.3354
49.8866
62.4361
229109222022116
7.2398
gduggal-snapplatINDELI6_15lowcmp_SimpleRepeat_quadTR_11to50het
18.3861
14.4397
25.3012
64.2755
67397631864
2.1505
gduggal-snapplatINDELI6_15lowcmp_SimpleRepeat_quadTR_11to50hetalt
32.6838
19.8128
93.2836
48.6590
12751412594
44.4444
gduggal-snapplatINDELI6_15lowcmp_SimpleRepeat_quadTR_11to50homalt
25.0503
16.2037
55.1724
73.1481
3518132268
30.7692
gduggal-snapvardINDEL*lowcmp_SimpleRepeat_quadTR_11to50*
65.0019
66.3696
63.6895
52.5107
13181667919510111237883
70.8712
gduggal-snapvardINDEL*lowcmp_SimpleRepeat_quadTR_11to50het
70.9040
85.7657
60.4321
53.0525
9526158116837110247799
70.7456
gduggal-snapvardINDEL*lowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
45.6919
0.0000
0.0000
12251456000
gduggal-snapvardINDEL*lowcmp_SimpleRepeat_quadTR_11to50homalt
56.5642
40.0198
96.4286
46.2791
2430364226739984
84.8485
gduggal-snapplatINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_11to50*
0.0000
0.0000
0.0000
0388000
gduggal-snapplatINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_11to50het
0.0000
0.0000
0.0000
0168000
gduggal-snapplatINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
0.0000
0.0000
0175000
gduggal-snapplatINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_11to50homalt
0.0000
0.0000
0.0000
045000
hfeng-pmm1INDELI1_5lowcmp_SimpleRepeat_quadTR_11to50*
99.2017
98.7689
99.6382
66.9061
3851483856148
57.1429
hfeng-pmm1INDELI1_5lowcmp_SimpleRepeat_quadTR_11to50het
99.1148
98.6494
99.5846
74.0889
168023167871
14.2857
hfeng-pmm1INDELI1_5lowcmp_SimpleRepeat_quadTR_11to50hetalt
99.0629
98.1432
100.0000
42.5707
111021111700
hfeng-pmm1INDELI1_5lowcmp_SimpleRepeat_quadTR_11to50homalt
99.4843
99.6244
99.3446
67.0980
10614106177
100.0000
hfeng-pmm1SNPtilowcmp_SimpleRepeat_quadTR_11to50*
99.6121
99.2918
99.9344
37.2432
10656761065671
14.2857
hfeng-pmm1SNPtilowcmp_SimpleRepeat_quadTR_11to50het
99.3889
98.8731
99.9101
37.5970
666876666860
0.0000
hfeng-pmm1SNPtilowcmp_SimpleRepeat_quadTR_11to50hetalt
66.6667
100.0000
50.0000
77.7778
10111
100.0000
hfeng-pmm1SNPtilowcmp_SimpleRepeat_quadTR_11to50homalt
100.0000
100.0000
100.0000
36.5834
39870398700
hfeng-pmm1SNPtvlowcmp_SimpleRepeat_quadTR_11to50*
99.4544
99.0741
99.8377
37.0787
7383697380123
25.0000
hfeng-pmm1SNPtvlowcmp_SimpleRepeat_quadTR_11to50het
99.1845
98.5711
99.8055
37.0083
462267461990
0.0000
hfeng-pmm1SNPtvlowcmp_SimpleRepeat_quadTR_11to50hetalt
90.9091
100.0000
83.3333
66.6667
50511
100.0000
hfeng-pmm1SNPtvlowcmp_SimpleRepeat_quadTR_11to50homalt
99.9275
99.9275
99.9275
37.0751
27562275622
100.0000
hfeng-pmm2INDEL*lowcmp_SimpleRepeat_quadTR_11to50*
99.1492
98.5802
99.7249
57.4159
19580282195735432
59.2593
hfeng-pmm2INDEL*lowcmp_SimpleRepeat_quadTR_11to50het
98.9153
98.1365
99.7066
60.6969
10901207108753210
31.2500