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Explore HG002 comparison results
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EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
42851-42900 / 86044 show all
gduggal-snapplatINDELD1_5lowcmp_SimpleRepeat_quadTR_11to50hetalt
41.1620
27.4615
82.1429
68.1214
41010834149076
84.4444
gduggal-snapplatINDELD1_5lowcmp_SimpleRepeat_quadTR_11to50homalt
68.1699
56.9831
84.8219
60.1659
208915773096554345
62.2744
gduggal-snapplatINDELD6_15lowcmp_SimpleRepeat_quadTR_11to50*
36.7443
23.6507
82.3171
53.0758
872281581017464
36.7816
gduggal-snapplatINDELD6_15lowcmp_SimpleRepeat_quadTR_11to50het
31.9191
20.6647
70.0935
57.9568
342131330012830
23.4375
gduggal-snapplatINDELD6_15lowcmp_SimpleRepeat_quadTR_11to50hetalt
38.1468
23.7733
96.4789
45.0677
281901274107
70.0000
gduggal-snapplatINDELD6_15lowcmp_SimpleRepeat_quadTR_11to50homalt
43.8001
29.2941
86.7647
51.6014
2496012363627
75.0000
gduggal-snapplatINDELC6_15lowcmp_SimpleRepeat_quadTR_11to50*
0.0000
0.0000
0.0000
00000
gduggal-snapplatINDELC6_15lowcmp_SimpleRepeat_quadTR_11to50het
0.0000
0.0000
0.0000
00000
gduggal-snapplatINDELC6_15lowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
0.0000
0.0000
00000
gduggal-snapplatINDELC6_15lowcmp_SimpleRepeat_quadTR_11to50homalt
0.0000
0.0000
0.0000
00000
gduggal-snapfbSNPtvlowcmp_SimpleRepeat_quadTR_11to50*
91.9883
99.2888
85.6879
49.6867
7399537430124143
3.4650
gduggal-snapfbSNPtvlowcmp_SimpleRepeat_quadTR_11to50het
88.7788
99.0616
80.4299
50.4389
4645444677113826
2.2847
gduggal-snapfbSNPtvlowcmp_SimpleRepeat_quadTR_11to50hetalt
40.0000
100.0000
25.0000
68.2540
505150
0.0000
gduggal-snapfbSNPtvlowcmp_SimpleRepeat_quadTR_11to50homalt
98.2657
99.6737
96.8970
47.8485
2749927488817
19.3182
gduggal-snapplatINDELC16_PLUSlowcmp_SimpleRepeat_quadTR_11to50*
0.0000
0.0000
0.0000
00000
gduggal-snapplatINDELC16_PLUSlowcmp_SimpleRepeat_quadTR_11to50het
0.0000
0.0000
0.0000
00000
gduggal-snapplatINDELC16_PLUSlowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
0.0000
0.0000
00000
gduggal-snapplatINDELC16_PLUSlowcmp_SimpleRepeat_quadTR_11to50homalt
0.0000
0.0000
0.0000
00000
gduggal-snapplatINDELC1_5lowcmp_SimpleRepeat_quadTR_11to50*
0.0000
0.0000
66.6667
01010
0.0000
gduggal-snapplatINDELC1_5lowcmp_SimpleRepeat_quadTR_11to50het
0.0000
0.0000
66.6667
01010
0.0000
gduggal-snapplatINDELC1_5lowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
0.0000
0.0000
00000
gduggal-snapplatINDELC1_5lowcmp_SimpleRepeat_quadTR_11to50homalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELD6_15lowcmp_SimpleRepeat_quadTR_11to50*
56.6451
52.8614
61.0122
54.6408
19491738195312481228
98.3974
ghariani-varprowlINDELD6_15lowcmp_SimpleRepeat_quadTR_11to50het
72.0736
97.5227
57.1579
53.3629
161441162512181207
99.0969
ghariani-varprowlINDELD6_15lowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
0.5922
0.0000
0.0000
71175000
ghariani-varprowlINDELD6_15lowcmp_SimpleRepeat_quadTR_11to50homalt
54.3046
38.5882
91.6201
62.7471
3285223283021
70.0000
ghariani-varprowlINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_11to50*
55.0492
45.3608
70.0000
75.3208
1762121757571
94.6667
ghariani-varprowlINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_11to50het
76.1553
85.1190
68.8995
75.1486
143251446561
93.8462
ghariani-varprowlSNP*lowcmp_SimpleRepeat_quadTR_11to50*
96.5798
99.2191
94.0773
54.5022
18041142180921139144
12.6427
ghariani-varprowlSNP*lowcmp_SimpleRepeat_quadTR_11to50het
95.5503
98.9154
92.4066
58.6255
113091241135493313
1.3934
ghariani-varprowlSNP*lowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
0.0000
0.0000
05000
ghariani-varprowlSNP*lowcmp_SimpleRepeat_quadTR_11to50homalt
98.4008
99.8073
97.0334
44.7618
6732136738206131
63.5922
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_quadTR_11to50*
76.4899
74.2821
78.8329
50.1539
88213054880823652266
95.8140
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_quadTR_11to50het
84.7836
98.6301
74.3463
50.8169
662492662522862211
96.7192
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
0.5358
0.0000
0.0000
81485000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_quadTR_11to50homalt
73.7755
59.7109
96.5075
47.3586
2189147721837955
69.6203
ghariani-varprowlINDELI6_15lowcmp_SimpleRepeat_quadTR_11to50*
51.3936
42.2407
65.6103
66.2441
558763559293288
98.2935
ghariani-varprowlINDELI6_15lowcmp_SimpleRepeat_quadTR_11to50het
73.6289
89.6552
62.4633
66.7479
41648426256253
98.8281
ghariani-varprowlINDELI6_15lowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
1.5601
0.0000
0.0000
10631000
ghariani-varprowlINDELI6_15lowcmp_SimpleRepeat_quadTR_11to50homalt
68.6210
61.1111
78.2353
64.0592
132841333735
94.5946
ghariani-varprowlINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_11to50*
52.6126
49.5308
56.1033
72.8835
475484478374353
94.3850
ghariani-varprowlINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_11to50het
66.8212
95.0125
51.5313
71.7775
38120387364344
94.5055
ghariani-varprowlINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
0.3049
0.0000
0.0000
1327000
ghariani-varprowlINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_11to50homalt
55.8190
40.4348
90.0990
79.0021
9313791109
90.0000
ghariani-varprowlSNPtilowcmp_SimpleRepeat_quadTR_11to50*
96.7473
99.3571
94.2711
57.1736
10663691069665069
10.6154
ghariani-varprowlSNPtilowcmp_SimpleRepeat_quadTR_11to50het
95.6807
99.1251
92.4676
62.1593
66855967155478
1.4625
ghariani-varprowlSNPtilowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
0.0000
0.0000
01000
ghariani-varprowlSNPtilowcmp_SimpleRepeat_quadTR_11to50homalt
98.6127
99.7743
97.4780
44.0701
39789398110361
59.2233
ghariani-varprowlINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
1.1429
0.0000
0.0000
2173000
ghariani-varprowlINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_11to50homalt
72.0930
68.8889
75.6098
76.1628
3114311010
100.0000