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Explore HG002 comparison results
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EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
42801-42850 / 86044 show all
gduggal-snapvardINDELD1_5lowcmp_SimpleRepeat_quadTR_51to200*
35.5104
33.6851
37.5449
56.5557
4158176271043747
71.6203
gduggal-snapvardINDELD1_5lowcmp_SimpleRepeat_quadTR_51to200het
46.6061
61.8182
37.4023
55.7713
2381476221041745
71.5658
gduggal-snapvardINDELD1_5lowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
26.6154
0.0000
0.0000
173477000
gduggal-snapvardINDELD1_5lowcmp_SimpleRepeat_quadTR_51to200homalt
3.9487
2.0305
71.4286
91.6667
4193522
100.0000
gduggal-snapvardINDELC6_15lowcmp_SimpleRepeat_quadTR_51to200*
0.0000
0.0000
13.3333
83.5165
002130
0.0000
gduggal-snapvardINDELC6_15lowcmp_SimpleRepeat_quadTR_51to200het
0.0000
0.0000
13.3333
82.7586
002130
0.0000
gduggal-snapvardINDELC6_15lowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELC6_15lowcmp_SimpleRepeat_quadTR_51to200homalt
0.0000
100.0000
00000
gduggal-snapplatINDELD1_5lowcmp_SimpleRepeat_quadTR_51to200*
29.6071
24.5130
37.3737
73.8468
302930481806369
45.7816
gduggal-snapplatINDELD1_5lowcmp_SimpleRepeat_quadTR_51to200het
28.4088
28.0519
28.7749
80.0908
108277202500107
21.4000
gduggal-snapplatINDELD1_5lowcmp_SimpleRepeat_quadTR_51to200hetalt
23.8140
14.0000
79.6460
57.8358
91559902317
73.9130
gduggal-snapplatINDELD1_5lowcmp_SimpleRepeat_quadTR_51to200homalt
45.3517
52.2843
40.0424
58.1189
10394189283245
86.5724
gduggal-snapplatINDELD6_15lowcmp_SimpleRepeat_quadTR_51to200*
23.7665
14.5247
65.3430
41.4376
19111241819638
39.5833
gduggal-snapplatINDELD6_15lowcmp_SimpleRepeat_quadTR_51to200het
16.5989
10.9091
34.6939
47.3118
36294346412
18.7500
gduggal-snapplatINDELD6_15lowcmp_SimpleRepeat_quadTR_51to200hetalt
22.9356
12.9887
97.9381
34.8993
1036909522
100.0000
gduggal-snapplatINDELD6_15lowcmp_SimpleRepeat_quadTR_51to200homalt
37.9562
27.0833
63.4146
40.5797
52140523024
80.0000
gduggal-snapplatINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_51to200*
0.0000
0.0000
0.0000
0616000
gduggal-snapplatINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_51to200het
0.0000
0.0000
0.0000
0164000
gduggal-snapplatINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.0000
0.0000
0350000
gduggal-snapplatINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_51to200homalt
0.0000
0.0000
0.0000
0102000
gduggal-snapfbSNPtvlowcmp_SimpleRepeat_quadTR_51to200*
15.4525
83.3333
8.5158
71.3389
357353761
0.2660
gduggal-snapfbSNPtvlowcmp_SimpleRepeat_quadTR_51to200het
14.5882
86.1111
7.9692
66.8654
315313581
0.2793
gduggal-snapfbSNPtvlowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.0000
77.7778
00040
0.0000
gduggal-snapfbSNPtvlowcmp_SimpleRepeat_quadTR_51to200homalt
33.3333
66.6667
22.2222
92.5620
424140
0.0000
gduggal-snapplatINDELC16_PLUSlowcmp_SimpleRepeat_quadTR_51to200*
0.0000
0.0000
0.0000
00000
gduggal-snapplatINDELC16_PLUSlowcmp_SimpleRepeat_quadTR_51to200het
0.0000
0.0000
0.0000
00000
gduggal-snapplatINDELC16_PLUSlowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.0000
0.0000
00000
gduggal-snapplatINDELC16_PLUSlowcmp_SimpleRepeat_quadTR_51to200homalt
0.0000
0.0000
0.0000
00000
gduggal-snapplatINDELC1_5lowcmp_SimpleRepeat_quadTR_51to200*
0.0000
100.0000
00000
gduggal-snapplatINDELC1_5lowcmp_SimpleRepeat_quadTR_51to200het
0.0000
100.0000
00000
gduggal-snapplatINDELC1_5lowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.0000
0.0000
00000
gduggal-snapplatINDELC1_5lowcmp_SimpleRepeat_quadTR_51to200homalt
0.0000
0.0000
0.0000
00000
gduggal-snapplatINDELC6_15lowcmp_SimpleRepeat_quadTR_51to200*
0.0000
0.0000
0.0000
00000
gduggal-snapplatINDELC6_15lowcmp_SimpleRepeat_quadTR_51to200het
0.0000
0.0000
0.0000
00000
gduggal-snapplatINDELC6_15lowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.0000
0.0000
00000
gduggal-snapplatINDELC6_15lowcmp_SimpleRepeat_quadTR_51to200homalt
0.0000
0.0000
0.0000
00000
gduggal-snapplatINDEL*lowcmp_SimpleRepeat_quadTR_51to200*
22.3230
16.2712
35.5425
80.2066
43222236061099407
37.0337
gduggal-snapplatINDEL*lowcmp_SimpleRepeat_quadTR_51to200het
18.7853
15.3926
24.0964
85.0898
149819240756119
15.7407
gduggal-snapplatINDEL*lowcmp_SimpleRepeat_quadTR_51to200hetalt
18.9971
10.7113
83.8926
61.0966
12810671252418
75.0000
gduggal-snapplatINDEL*lowcmp_SimpleRepeat_quadTR_51to200homalt
36.3779
31.5041
43.0357
63.8943
155337241319270
84.6395
gduggal-snapplatINDEL*lowcmp_SimpleRepeat_quadTR_11to50*
47.9906
38.1180
64.7645
71.6412
757112291100675477926
16.9071
gduggal-snapplatINDEL*lowcmp_SimpleRepeat_quadTR_11to50het
44.8798
37.6755
55.4905
73.6943
4185692356854560444
9.7368
gduggal-snapplatINDEL*lowcmp_SimpleRepeat_quadTR_11to50hetalt
35.8000
22.6696
85.0767
69.9119
608207461010784
78.5047
gduggal-snapplatINDEL*lowcmp_SimpleRepeat_quadTR_11to50homalt
58.8151
45.7510
82.3221
66.0165
277832943772810398
49.1358
gduggal-snapplatINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_11to50*
0.0000
0.0000
0.0000
0959000
gduggal-snapplatINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_11to50het
0.0000
0.0000
0.0000
0401000
gduggal-snapplatINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
0.0000
0.0000
0328000
gduggal-snapplatINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_11to50homalt
0.0000
0.0000
0.0000
0230000
gduggal-snapplatINDELD1_5lowcmp_SimpleRepeat_quadTR_11to50*
59.3370
47.9747
77.7515
66.6856
5697617882302355819
34.7771
gduggal-snapplatINDELD1_5lowcmp_SimpleRepeat_quadTR_11to50het
57.7607
47.6176
73.3945
69.4184
3198351847201711398
23.2613