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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 81 82 83 84 85 86 87 88 89 ... 1720 1721 » 4201-4250 / 86044 show all
anovak-vg	INDEL	I6_15	segdup	*	45.2111	40.5714	51.0490	89.3838	71	104	73	70	55	78.5714
anovak-vg	INDEL	I6_15	segdup	het	38.0775	28.9157	55.7377	91.0688	24	59	34	27	13	48.1481
anovak-vg	INDEL	I6_15	segdup	hetalt	0.0000	20.0000	0.0000	0.0000	9	36	0	0	0
anovak-vg	INDEL	I6_15	segdup	homalt	59.8909	80.8511	47.5610	87.6506	38	9	39	43	42	97.6744
hfeng-pmm1	INDEL	D16_PLUS	segdup	*	94.9153	96.5517	93.3333	95.3811	56	2	56	4	0	0.0000
hfeng-pmm1	INDEL	D16_PLUS	segdup	het	94.5946	100.0000	89.7436	95.7330	37	0	35	4	0	0.0000
hfeng-pmm1	INDEL	D16_PLUS	segdup	hetalt	87.5000	77.7778	100.0000	92.8571	7	2	9	0	0
hfeng-pmm1	INDEL	D16_PLUS	segdup	homalt	100.0000	100.0000	100.0000	95.3668	12	0	12	0	0
hfeng-pmm1	INDEL	D1_5	segdup	*	99.4565	99.4560	99.4570	94.0511	1097	6	1099	6	0	0.0000
hfeng-pmm1	INDEL	D1_5	segdup	het	99.2064	99.2775	99.1354	93.9383	687	5	688	6	0	0.0000
hfeng-pmm1	INDEL	D1_5	segdup	hetalt	99.0291	98.0769	100.0000	95.6007	51	1	52	0	0
hfeng-pmm1	INDEL	D1_5	segdup	homalt	100.0000	100.0000	100.0000	93.9603	359	0	359	0	0
hfeng-pmm1	INDEL	C6_15	segdup	*		0.0000	0.0000	0.0000	0	0	0	0	0
hfeng-pmm1	INDEL	C6_15	segdup	het		0.0000	0.0000	0.0000	0	0	0	0	0
hfeng-pmm1	INDEL	C6_15	segdup	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
hfeng-pmm1	INDEL	C6_15	segdup	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ghariani-varprowl	SNP	ti	segdup	*	98.2251	99.6929	96.7998	91.5895	19477	60	19480	644	38	5.9006
ghariani-varprowl	SNP	ti	segdup	het	97.4023	99.5594	95.3366	92.6943	11977	53	11980	586	2	0.3413
ghariani-varprowl	SNP	ti	segdup	hetalt		0.0000	0.0000	0.0000	0	2	0	0	0
ghariani-varprowl	SNP	ti	segdup	homalt	99.5818	99.9334	99.2326	88.7647	7500	5	7500	58	36	62.0690
ghariani-varprowl	SNP	tv	segdup	*	97.0800	99.5077	94.7680	93.4258	8490	42	8495	469	32	6.8230
ghariani-varprowl	SNP	tv	segdup	het	95.9597	99.4326	92.7212	94.3028	5257	30	5261	413	3	0.7264
ghariani-varprowl	SNP	tv	segdup	hetalt		0.0000	0.0000	0.0000	0	7	0	0	0
ghariani-varprowl	SNP	tv	segdup	homalt	99.0657	99.8456	98.2979	91.0501	3233	5	3234	56	29	51.7857
hfeng-pmm1	INDEL	C16_PLUS	segdup	*		0.0000	0.0000	0.0000	0	0	0	0	0
hfeng-pmm1	INDEL	C16_PLUS	segdup	het		0.0000	0.0000	0.0000	0	0	0	0	0
hfeng-pmm1	INDEL	C16_PLUS	segdup	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
hfeng-pmm1	INDEL	C16_PLUS	segdup	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
hfeng-pmm1	INDEL	C1_5	segdup	*		0.0000	0.0000	0.0000	0	0	0	0	0
hfeng-pmm1	INDEL	C1_5	segdup	het		0.0000	0.0000	0.0000	0	0	0	0	0
hfeng-pmm1	INDEL	C1_5	segdup	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
hfeng-pmm1	INDEL	C1_5	segdup	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
hfeng-pmm1	INDEL	*	segdup	*	99.0215	98.9437	99.0995	94.0294	2529	27	2531	23	4	17.3913
hfeng-pmm1	INDEL	*	segdup	het	98.8075	98.9086	98.7066	94.4130	1450	16	1450	19	0	0.0000
hfeng-pmm1	INDEL	*	segdup	hetalt	96.4143	93.0769	100.0000	94.8341	121	9	123	0	0
hfeng-pmm1	INDEL	*	segdup	homalt	99.6878	99.7917	99.5842	93.1783	958	2	958	4	4	100.0000
hfeng-pmm1	SNP	tv	segdup	*	99.7305	99.7773	99.6837	90.5181	8513	19	8509	27	6	22.2222
hfeng-pmm1	SNP	tv	segdup	het	99.6406	99.6785	99.6028	90.6534	5270	17	5266	21	0	0.0000
hfeng-pmm1	SNP	tv	segdup	hetalt	100.0000	100.0000	100.0000	97.5610	7	0	7	0	0
hfeng-pmm1	SNP	tv	segdup	homalt	99.8765	99.9382	99.8149	90.2264	3236	2	3236	6	6	100.0000
hfeng-pmm2	INDEL	*	segdup	*	99.0994	98.9828	99.2163	94.4475	2530	26	2532	20	4	20.0000
hfeng-pmm2	INDEL	*	segdup	het	98.9768	98.9768	98.9768	94.9944	1451	15	1451	15	0	0.0000
hfeng-pmm2	INDEL	*	segdup	hetalt	96.4143	93.0769	100.0000	94.8471	121	9	123	0	0
hfeng-pmm2	INDEL	*	segdup	homalt	99.6360	99.7917	99.4808	93.2596	958	2	958	5	4	80.0000
hfeng-pmm1	SNP	ti	segdup	*	99.7442	99.8004	99.6881	88.7407	19498	39	19496	61	5	8.1967
hfeng-pmm1	SNP	ti	segdup	het	99.6179	99.7007	99.5352	89.0346	11994	36	11992	56	0	0.0000
hfeng-pmm1	SNP	ti	segdup	hetalt	100.0000	100.0000	100.0000	98.8889	2	0	2	0	0
hfeng-pmm1	SNP	ti	segdup	homalt	99.9467	99.9600	99.9334	88.2045	7502	3	7502	5	5	100.0000
hfeng-pmm1	INDEL	D6_15	segdup	*	96.0000	94.2408	97.8261	92.8377	180	11	180	4	2	50.0000
hfeng-pmm1	INDEL	D6_15	segdup	het	96.1326	94.5652	97.7528	94.0067	87	5	87	2	0	0.0000

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