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Explore HG002 comparison results
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EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
39201-39250 / 86044 show all
gduggal-snapplatINDEL*lowcmp_SimpleRepeat_triTR_11to50*
53.7099
42.3437
73.4172
63.2026
2851388238501394367
26.3271
gduggal-snapplatINDEL*lowcmp_SimpleRepeat_triTR_11to50het
52.7157
43.0290
68.0310
66.2410
1574208421941031178
17.2648
gduggal-snapplatINDEL*lowcmp_SimpleRepeat_triTR_11to50hetalt
42.3946
28.6024
81.8750
58.3875
2646592625851
87.9310
gduggal-snapplatINDEL*lowcmp_SimpleRepeat_triTR_11to50homalt
59.8233
47.0725
82.0483
56.7574
101311391394305138
45.2459
gduggal-snapplatINDELD16_PLUSlowcmp_SimpleRepeat_triTR_11to50*
0.0000
0.0000
0.0000
0157000
gduggal-snapplatINDELD16_PLUSlowcmp_SimpleRepeat_triTR_11to50het
0.0000
0.0000
0.0000
061000
gduggal-snapplatINDELD16_PLUSlowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
0.0000
0.0000
051000
gduggal-snapplatINDELD16_PLUSlowcmp_SimpleRepeat_triTR_11to50homalt
0.0000
0.0000
0.0000
045000
ghariani-varprowlINDELI6_15lowcmp_SimpleRepeat_triTR_11to50*
47.0793
34.9282
72.1951
63.7809
1462721485756
98.2456
ghariani-varprowlINDELI6_15lowcmp_SimpleRepeat_triTR_11to50het
78.8127
90.1639
70.0000
64.4444
110121124848
100.0000
ghariani-varprowlINDELI6_15lowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
0.0000
0.0000
0237000
ghariani-varprowlINDELI6_15lowcmp_SimpleRepeat_triTR_11to50homalt
69.2308
61.0169
80.0000
61.2069
36233698
88.8889
ghariani-varprowlINDELD16_PLUSlowcmp_SimpleRepeat_triTR_11to50*
50.5051
47.7707
53.5714
69.8925
7582756561
93.8462
ghariani-varprowlINDELD16_PLUSlowcmp_SimpleRepeat_triTR_11to50het
61.8785
91.8033
46.6667
69.3095
565566460
93.7500
ghariani-varprowlINDELD16_PLUSlowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
0.0000
0.0000
051000
ghariani-varprowlINDELD16_PLUSlowcmp_SimpleRepeat_triTR_11to50homalt
58.4615
42.2222
95.0000
72.9730
19261911
100.0000
ghariani-varprowlSNPtilowcmp_SimpleRepeat_triTR_11to50*
98.6463
99.5904
97.7199
44.7612
3890163900919
9.8901
ghariani-varprowlSNPtilowcmp_SimpleRepeat_triTR_11to50het
98.2105
99.3947
97.0542
49.5042
2463152471750
0.0000
ghariani-varprowlSNPtilowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
0.0000
0.0000
01000
ghariani-varprowlSNPtilowcmp_SimpleRepeat_triTR_11to50homalt
99.4433
100.0000
98.8927
33.8067
142701429169
56.2500
ghariani-varprowlINDELI16_PLUSlowcmp_SimpleRepeat_triTR_11to50*
62.5000
54.0541
74.0741
77.3109
20172077
100.0000
ghariani-varprowlINDELI16_PLUSlowcmp_SimpleRepeat_triTR_11to50het
80.0000
87.5000
73.6842
79.3478
1421455
100.0000
ghariani-varprowlINDELI16_PLUSlowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
0.0000
0.0000
013000
ghariani-varprowlINDELI16_PLUSlowcmp_SimpleRepeat_triTR_11to50homalt
75.0000
75.0000
75.0000
70.3704
62622
100.0000
ghariani-varprowlINDELI1_5lowcmp_SimpleRepeat_triTR_11to50*
75.4470
65.9048
88.2202
66.0139
6923586899270
76.0870
ghariani-varprowlINDELI1_5lowcmp_SimpleRepeat_triTR_11to50het
91.1970
96.8085
86.2004
69.9943
455154567358
79.4521
ghariani-varprowlINDELI1_5lowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
1.2780
0.0000
0.0000
4309000
ghariani-varprowlINDELI1_5lowcmp_SimpleRepeat_triTR_11to50homalt
89.7881
87.2659
92.4603
52.8972
233342331912
63.1579
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_triTR_11to50*
79.6213
77.5816
81.7711
43.7436
31639143158704666
94.6023
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_triTR_11to50het
86.3814
98.9059
76.6723
45.1991
2260252258687651
94.7598
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
0.4329
0.0000
0.0000
2460000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_triTR_11to50homalt
80.1595
67.7444
98.1461
38.4977
9014299001715
88.2353
ghariani-varprowlINDELD6_15lowcmp_SimpleRepeat_triTR_11to50*
53.0600
50.0000
56.5189
40.9091
865865867667662
99.2504
ghariani-varprowlINDELD6_15lowcmp_SimpleRepeat_triTR_11to50het
67.8919
98.5775
51.7751
39.8577
69310700652649
99.5399
ghariani-varprowlINDELD6_15lowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
0.6849
0.0000
0.0000
4580000
ghariani-varprowlINDELD6_15lowcmp_SimpleRepeat_triTR_11to50homalt
53.6664
37.9233
91.7582
47.7011
1682751671513
86.6667
ghariani-varprowlSNP*lowcmp_SimpleRepeat_triTR_11to50*
97.9537
99.3610
96.5858
46.1375
730847732725942
16.2162
ghariani-varprowlSNP*lowcmp_SimpleRepeat_triTR_11to50het
97.4281
99.0035
95.9022
49.9948
45704645871961
0.5102
ghariani-varprowlSNP*lowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
0.0000
0.0000
01000
ghariani-varprowlSNP*lowcmp_SimpleRepeat_triTR_11to50homalt
98.8634
100.0000
97.7524
37.9730
2738027406341
65.0794
cchapple-customINDELC1_5lowcmp_SimpleRepeat_triTR_11to50*
94.5455
100.0000
89.6552
92.7861
102631
33.3333
cchapple-customINDELC1_5lowcmp_SimpleRepeat_triTR_11to50het
92.3077
100.0000
85.7143
93.1596
101831
33.3333
cchapple-customINDELC1_5lowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
0.0000
0.0000
00000
cchapple-customINDELC1_5lowcmp_SimpleRepeat_triTR_11to50homalt
0.0000
0.0000
100.0000
91.5789
00800
bgallagher-sentieonSNPtvlowcmp_SimpleRepeat_triTR_11to50*
99.6672
99.8841
99.4512
37.3053
344643443192
10.5263
bgallagher-sentieonSNPtvlowcmp_SimpleRepeat_triTR_11to50het
99.5336
99.9532
99.1175
38.8352
213712134192
10.5263
bgallagher-sentieonSNPtvlowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
100.0000
01000
bgallagher-sentieonSNPtvlowcmp_SimpleRepeat_triTR_11to50homalt
99.9237
99.8474
100.0000
34.5500
13092130900
bgallagher-sentieonINDELI1_5lowcmp_SimpleRepeat_triTR_11to50*
99.5235
99.4286
99.6187
61.7293
10446104544
100.0000
bgallagher-sentieonINDELI1_5lowcmp_SimpleRepeat_triTR_11to50het
99.5738
99.3617
99.7868
68.2894
467346811
100.0000