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Explore HG002 comparison results
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EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
32201-32250 / 86044 show all
mlin-fermikitSNPtvmap_l100_m1_e0homalt
71.5194
65.9516
78.1139
49.8226
59643079596416711585
94.8534
rpoplin-dv42SNPtvmap_l100_m1_e0*
99.2751
99.2204
99.3298
64.0760
243101912430616480
48.7805
rpoplin-dv42SNPtvmap_l100_m1_e0het
99.1180
99.1503
99.0858
64.8238
152861311528214159
41.8440
rpoplin-dv42SNPtvmap_l100_m1_e0hetalt
96.4706
100.0000
93.1818
83.5821
4104133
100.0000
rpoplin-dv42SNPtvmap_l100_m1_e0homalt
99.5567
99.3365
99.7779
62.4922
89836089832018
90.0000
rpoplin-dv42SNPtimap_l100_m1_e0*
99.4597
99.2844
99.6356
62.6996
4758834347581174118
67.8161
rpoplin-dv42SNPtimap_l100_m1_e0het
99.3390
99.1350
99.5438
63.8948
296832592967513682
60.2941
rpoplin-dv42SNPtimap_l100_m1_e0hetalt
96.6667
100.0000
93.5484
82.7778
2902922
100.0000
rpoplin-dv42SNPtimap_l100_m1_e0homalt
99.6655
99.5323
99.7990
60.4404
1787684178773634
94.4444
rpoplin-dv42SNP*map_l100_m1_e0*
99.3983
99.2625
99.5346
63.1596
7186953471858336196
58.3333
rpoplin-dv42SNP*map_l100_m1_e0het
99.2638
99.1402
99.3876
64.2170
4496939044957277141
50.9025
rpoplin-dv42SNP*map_l100_m1_e0hetalt
96.4706
100.0000
93.1818
83.5821
4104133
100.0000
rpoplin-dv42SNP*map_l100_m1_e0homalt
99.6291
99.4667
99.7919
61.1512
26859144268605652
92.8571
rpoplin-dv42INDELC6_15map_l100_m1_e0*
0.0000
100.0000
00000
rpoplin-dv42INDELC6_15map_l100_m1_e0het
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC6_15map_l100_m1_e0hetalt
0.0000
100.0000
00000
rpoplin-dv42INDELC6_15map_l100_m1_e0homalt
0.0000
100.0000
00000
rpoplin-dv42INDELI16_PLUSmap_l100_m1_e0*
89.7959
84.6154
95.6522
78.3019
2242210
0.0000
rpoplin-dv42INDELI16_PLUSmap_l100_m1_e0het
91.4286
88.8889
94.1176
73.0159
1621610
0.0000
rpoplin-dv42INDELI16_PLUSmap_l100_m1_e0hetalt
80.0000
66.6667
100.0000
87.5000
21200
rpoplin-dv42INDELI16_PLUSmap_l100_m1_e0homalt
88.8889
80.0000
100.0000
85.1852
41400
rpoplin-dv42INDELD1_5map_l100_m1_e0*
98.7016
98.6472
98.7561
82.9460
1823251826239
39.1304
rpoplin-dv42INDELD1_5map_l100_m1_e0het
98.4276
98.2630
98.5927
82.4444
1188211191174
23.5294
rpoplin-dv42INDELD1_5map_l100_m1_e0hetalt
97.8261
95.7447
100.0000
92.0635
4524500
rpoplin-dv42INDELD1_5map_l100_m1_e0homalt
99.3266
99.6622
98.9933
82.4396
590259065
83.3333
rpoplin-dv42INDELD6_15map_l100_m1_e0*
94.9416
94.5736
95.3125
85.7936
24414244126
50.0000
rpoplin-dv42INDELD6_15map_l100_m1_e0het
94.6154
97.6190
91.7910
88.3173
1233123116
54.5455
rpoplin-dv42INDELD6_15map_l100_m1_e0hetalt
92.9134
86.7647
100.0000
72.5581
5995900
rpoplin-dv42INDELD6_15map_l100_m1_e0homalt
97.6378
96.8750
98.4127
85.6818
6226210
0.0000
rpoplin-dv42INDELI6_15map_l100_m1_e0*
93.1507
89.4737
97.1429
84.5133
1021210232
66.6667
rpoplin-dv42INDELI6_15map_l100_m1_e0het
91.0714
86.4407
96.2264
85.3591
5185122
100.0000
rpoplin-dv42INDELI6_15map_l100_m1_e0hetalt
97.7778
100.0000
95.6522
77.6699
2202210
0.0000
rpoplin-dv42INDELI6_15map_l100_m1_e0homalt
93.5484
87.8788
100.0000
86.3850
2942900
rpoplin-dv42INDELD16_PLUSmap_l100_m1_e0*
84.4720
78.1609
91.8919
88.8218
68196863
50.0000
rpoplin-dv42INDELD16_PLUSmap_l100_m1_e0het
86.3636
82.6087
90.4762
90.4328
3883842
50.0000
rpoplin-dv42INDELD16_PLUSmap_l100_m1_e0hetalt
79.0698
65.3846
100.0000
66.0000
1791700
rpoplin-dv42INDELD16_PLUSmap_l100_m1_e0homalt
86.6667
86.6667
86.6667
91.3295
1321321
50.0000
rpoplin-dv42INDELI1_5map_l100_m1_e0*
98.6138
98.2076
99.0233
82.7345
1315241318136
46.1538
rpoplin-dv42INDELI1_5map_l100_m1_e0het
98.3792
97.5547
99.2177
83.0610
7581976164
66.6667
rpoplin-dv42INDELI1_5map_l100_m1_e0hetalt
93.1818
93.1818
93.1818
91.0569
4134130
0.0000
rpoplin-dv42INDELI1_5map_l100_m1_e0homalt
99.4220
99.6139
99.2308
80.6620
516251642
50.0000
qzeng-customINDELI1_5map_l100_m1_e0*
81.6840
71.9940
94.3881
86.6528
96437513968316
19.2771
qzeng-customINDELI1_5map_l100_m1_e0het
80.8356
71.8147
92.4485
89.2761
5582198086613
19.6970
qzeng-customINDELI1_5map_l100_m1_e0hetalt
87.1795
77.2727
100.0000
89.4180
34102000
qzeng-customINDELI1_5map_l100_m1_e0homalt
82.5627
71.8147
97.0940
78.6652
372146568173
17.6471
qzeng-customSNPtimap_l100_m1_e0*
87.5018
78.7403
98.4572
75.1333
377411019037460587485
82.6235
qzeng-customSNPtimap_l100_m1_e0het
87.3398
78.8625
97.8592
80.1613
23613632923496514414
80.5447
qzeng-customSNPtimap_l100_m1_e0hetalt
81.6327
68.9655
100.0000
88.0952
2092000
qzeng-customSNPtimap_l100_m1_e0homalt
87.7858
78.5523
99.4792
55.9352
141083852139447371
97.2603
qzeng-customINDELI16_PLUSmap_l100_m1_e0*
53.3873
61.5385
47.1429
81.9588
161033370
0.0000