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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 637 638 639 640 641 642 643 644 645 ... 1720 1721 » 32001-32050 / 86044 show all
jli-custom	SNP	*	map_l100_m1_e0	*	99.4716	99.3149	99.6287	61.0483	71907	496	71904	268	79	29.4776
jli-custom	SNP	*	map_l100_m1_e0	het	99.2812	99.1159	99.4470	63.0672	44958	401	44955	250	62	24.8000
jli-custom	SNP	*	map_l100_m1_e0	hetalt	98.7952	100.0000	97.6190	72.5490	41	0	41	1	1	100.0000
jli-custom	SNP	*	map_l100_m1_e0	homalt	99.7923	99.6482	99.9369	57.0814	26908	95	26908	17	16	94.1176
jmaeng-gatk	INDEL	C6_15	map_l100_m1_e0	*		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C6_15	map_l100_m1_e0	het		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C6_15	map_l100_m1_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C6_15	map_l100_m1_e0	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	D16_PLUS	map_l100_m1_e0	*	88.8889	91.9540	86.0215	94.9264	80	7	80	13	4	30.7692
jmaeng-gatk	INDEL	D16_PLUS	map_l100_m1_e0	het	88.7014	95.6522	82.6923	96.1223	44	2	43	9	4	44.4444
jmaeng-gatk	INDEL	D16_PLUS	map_l100_m1_e0	hetalt	91.6667	84.6154	100.0000	77.6699	22	4	23	0	0
jmaeng-gatk	INDEL	D16_PLUS	map_l100_m1_e0	homalt	84.8485	93.3333	77.7778	95.3728	14	1	14	4	0	0.0000
jmaeng-gatk	INDEL	*	map_l100_m1_e0	*	96.9028	98.0201	95.8107	88.4970	3515	71	3522	154	21	13.6364
jmaeng-gatk	INDEL	*	map_l100_m1_e0	het	96.0483	98.2103	93.9795	90.0412	2195	40	2201	141	14	9.9291
jmaeng-gatk	INDEL	*	map_l100_m1_e0	hetalt	93.1034	87.0968	100.0000	87.1915	108	16	109	0	0
jmaeng-gatk	INDEL	*	map_l100_m1_e0	homalt	98.8581	98.7775	98.9388	83.8582	1212	15	1212	13	7	53.8462
jlack-gatk	INDEL	C16_PLUS	map_l100_m1_e0	*		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	C16_PLUS	map_l100_m1_e0	het		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	C16_PLUS	map_l100_m1_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	C16_PLUS	map_l100_m1_e0	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	D16_PLUS	map_l100_m1_e0	*	83.3333	86.2069	80.6452	94.7428	75	12	75	18	6	33.3333
jlack-gatk	INDEL	D16_PLUS	map_l100_m1_e0	het	83.7549	91.3043	77.3585	95.9726	42	4	41	12	4	33.3333
jlack-gatk	INDEL	D16_PLUS	map_l100_m1_e0	hetalt	85.1927	76.9231	95.4545	76.5957	20	6	21	1	0	0.0000
jlack-gatk	INDEL	D16_PLUS	map_l100_m1_e0	homalt	78.7879	86.6667	72.2222	94.9861	13	2	13	5	2	40.0000
jlack-gatk	INDEL	D1_5	map_l100_m1_e0	*	95.2221	98.5390	92.1212	86.6783	1821	27	1824	156	11	7.0513
jlack-gatk	INDEL	D1_5	map_l100_m1_e0	het	93.4933	99.0074	88.5609	87.9481	1197	12	1200	155	10	6.4516
jlack-gatk	INDEL	D1_5	map_l100_m1_e0	hetalt	93.1818	87.2340	100.0000	90.9492	41	6	41	0	0
jlack-gatk	INDEL	D1_5	map_l100_m1_e0	homalt	99.1497	98.4797	99.8288	81.5598	583	9	583	1	1	100.0000
jlack-gatk	INDEL	*	map_l100_m1_e0	*	95.3278	97.9922	92.8044	87.6441	3514	72	3521	273	26	9.5238
jlack-gatk	INDEL	*	map_l100_m1_e0	het	93.6574	98.2103	89.5079	89.1540	2195	40	2201	258	20	7.7519
jlack-gatk	INDEL	*	map_l100_m1_e0	hetalt	92.7075	87.0968	99.0909	87.3418	108	16	109	1	0	0.0000
jlack-gatk	INDEL	*	map_l100_m1_e0	homalt	98.7765	98.6960	98.8571	82.9030	1211	16	1211	14	6	42.8571
jlack-gatk	INDEL	C6_15	map_l100_m1_e0	*		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	C6_15	map_l100_m1_e0	het		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	C6_15	map_l100_m1_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	C6_15	map_l100_m1_e0	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
hfeng-pmm3	SNP	tv	map_l100_m1_e0	*	99.6386	99.5919	99.6854	64.5700	24401	100	24397	77	10	12.9870
hfeng-pmm3	SNP	tv	map_l100_m1_e0	het	99.5262	99.4681	99.5843	65.6944	15335	82	15331	64	5	7.8125
hfeng-pmm3	SNP	tv	map_l100_m1_e0	hetalt	100.0000	100.0000	100.0000	76.7045	41	0	41	0	0
hfeng-pmm3	SNP	tv	map_l100_m1_e0	homalt	99.8285	99.8010	99.8562	62.3809	9025	18	9025	13	5	38.4615
jlack-gatk	INDEL	D6_15	map_l100_m1_e0	*	92.8030	94.9612	90.7407	88.2660	245	13	245	25	3	12.0000
jlack-gatk	INDEL	D6_15	map_l100_m1_e0	het	89.7059	96.8254	83.5616	91.2365	122	4	122	24	3	12.5000
jlack-gatk	INDEL	D6_15	map_l100_m1_e0	hetalt	93.0233	88.2353	98.3607	71.6279	60	8	60	1	0	0.0000
jlack-gatk	INDEL	D6_15	map_l100_m1_e0	homalt	99.2126	98.4375	100.0000	85.0000	63	1	63	0	0
jlack-gatk	INDEL	C1_5	map_l100_m1_e0	*		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	C1_5	map_l100_m1_e0	het		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	C1_5	map_l100_m1_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	C1_5	map_l100_m1_e0	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
qzeng-custom	INDEL	*	map_l100_m1_e0	*	83.9800	79.0296	89.5920	87.4621	2834	752	3667	426	66	15.4930
qzeng-custom	INDEL	*	map_l100_m1_e0	het	83.3456	79.6421	87.4105	89.3842	1780	455	2319	334	53	15.8683

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