PrecisionFDA
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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 631 632 633 634 635 636 637 638 639 ... 1720 1721 » 31701-31750 / 86044 show all
jmaeng-gatk	INDEL	C16_PLUS	map_l100_m2_e0	*		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C16_PLUS	map_l100_m2_e0	het		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C16_PLUS	map_l100_m2_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C16_PLUS	map_l100_m2_e0	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C1_5	map_l100_m2_e0	*		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C1_5	map_l100_m2_e0	het		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C1_5	map_l100_m2_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C1_5	map_l100_m2_e0	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C6_15	map_l100_m2_e0	*		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C6_15	map_l100_m2_e0	het		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C6_15	map_l100_m2_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C6_15	map_l100_m2_e0	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	D16_PLUS	map_l100_m2_e0	*	89.2473	92.2222	86.4583	95.4717	83	7	83	13	4	30.7692
jmaeng-gatk	INDEL	D16_PLUS	map_l100_m2_e0	het	88.9670	95.8333	83.0189	96.5762	46	2	44	9	4	44.4444
jmaeng-gatk	INDEL	D16_PLUS	map_l100_m2_e0	hetalt	91.6667	84.6154	100.0000	78.1818	22	4	24	0	0
jmaeng-gatk	INDEL	D16_PLUS	map_l100_m2_e0	homalt	85.7143	93.7500	78.9474	95.8874	15	1	15	4	0	0.0000
jmaeng-gatk	INDEL	*	map_l100_m2_e0	*	96.9371	97.9962	95.9006	89.1934	3619	74	3626	155	21	13.5484
jmaeng-gatk	INDEL	*	map_l100_m2_e0	het	96.1235	98.1795	94.1518	90.6489	2265	42	2270	141	14	9.9291
jmaeng-gatk	INDEL	*	map_l100_m2_e0	hetalt	92.7039	86.4000	100.0000	88.0952	108	17	110	0	0
jmaeng-gatk	INDEL	*	map_l100_m2_e0	homalt	98.8497	98.8105	98.8889	84.7844	1246	15	1246	14	7	50.0000
jli-custom	SNP	*	map_l100_m2_e0	*	99.4726	99.3267	99.6190	63.1033	73466	498	73463	281	79	28.1139
jli-custom	SNP	*	map_l100_m2_e0	het	99.2823	99.1336	99.4314	64.8428	45997	402	45994	263	62	23.5741
jli-custom	SNP	*	map_l100_m2_e0	hetalt	98.8235	100.0000	97.6744	75.2874	42	0	42	1	1	100.0000
jli-custom	SNP	*	map_l100_m2_e0	homalt	99.7944	99.6512	99.9381	59.7123	27427	96	27427	17	16	94.1176
jli-custom	SNP	tv	map_l100_m2_e0	*	99.4221	99.3089	99.5355	64.2177	24860	173	24859	116	30	25.8621
jli-custom	SNP	tv	map_l100_m2_e0	het	99.2133	99.1190	99.3078	65.8320	15638	139	15637	109	24	22.0183
jli-custom	SNP	tv	map_l100_m2_e0	hetalt	98.8235	100.0000	97.6744	75.2874	42	0	42	1	1	100.0000
jli-custom	SNP	tv	map_l100_m2_e0	homalt	99.7826	99.6310	99.9347	60.9754	9180	34	9180	6	5	83.3333
jlack-gatk	INDEL	*	map_l100_m2_e0	*	95.3427	97.9691	92.8535	88.3944	3618	75	3625	279	28	10.0358
jlack-gatk	INDEL	*	map_l100_m2_e0	het	93.6860	98.1795	89.5858	89.8045	2265	42	2271	264	22	8.3333
jlack-gatk	INDEL	*	map_l100_m2_e0	hetalt	92.7695	87.2000	99.0991	88.2788	109	16	110	1	0	0.0000
jlack-gatk	INDEL	*	map_l100_m2_e0	homalt	98.7694	98.6519	98.8871	83.9295	1244	17	1244	14	6	42.8571
jlack-gatk	INDEL	C6_15	map_l100_m2_e0	*		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	C6_15	map_l100_m2_e0	het		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	C6_15	map_l100_m2_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	C6_15	map_l100_m2_e0	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	D16_PLUS	map_l100_m2_e0	*	83.8710	86.6667	81.2500	95.3033	78	12	78	18	6	33.3333
jlack-gatk	INDEL	D16_PLUS	map_l100_m2_e0	het	84.3889	91.6667	78.1818	96.3648	44	4	43	12	4	33.3333
jlack-gatk	INDEL	D16_PLUS	map_l100_m2_e0	hetalt	85.1927	76.9231	95.4545	78.0000	20	6	21	1	0	0.0000
jlack-gatk	INDEL	D16_PLUS	map_l100_m2_e0	homalt	80.0000	87.5000	73.6842	95.5916	14	2	14	5	2	40.0000
jlack-gatk	INDEL	D1_5	map_l100_m2_e0	*	95.2850	98.5379	92.2401	87.2851	1887	28	1890	159	11	6.9182
jlack-gatk	INDEL	D1_5	map_l100_m2_e0	het	93.5776	98.9650	88.7464	88.5144	1243	13	1246	158	10	6.3291
jlack-gatk	INDEL	D1_5	map_l100_m2_e0	hetalt	93.3333	87.5000	100.0000	91.3402	42	6	42	0	0
jlack-gatk	INDEL	D1_5	map_l100_m2_e0	homalt	99.1763	98.5270	99.8342	82.2959	602	9	602	1	1	100.0000
jlack-gatk	INDEL	D6_15	map_l100_m2_e0	*	92.7644	94.6970	90.9091	88.8709	250	14	250	25	3	12.0000
jlack-gatk	INDEL	D6_15	map_l100_m2_e0	het	89.6797	96.1832	84.0000	91.6574	126	5	126	24	3	12.5000
jlack-gatk	INDEL	D6_15	map_l100_m2_e0	hetalt	93.0233	88.2353	98.3607	72.8889	60	8	60	1	0	0.0000
jlack-gatk	INDEL	D6_15	map_l100_m2_e0	homalt	99.2248	98.4615	100.0000	85.7143	64	1	64	0	0
jlack-gatk	INDEL	C1_5	map_l100_m2_e0	*		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	C1_5	map_l100_m2_e0	het		0.0000	0.0000	0.0000	0	0	0	0	0

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