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Explore HG002 comparison results
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EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
31501-31550 / 86044 show all
eyeh-varpipeINDELD16_PLUSmap_l100_m2_e0*
58.4466
46.6667
78.1818
86.7150
4248431212
100.0000
eyeh-varpipeINDELD16_PLUSmap_l100_m2_e0het
73.7430
66.6667
82.5000
83.6735
32163377
100.0000
eyeh-varpipeINDELD16_PLUSmap_l100_m2_e0hetalt
14.2857
7.6923
100.0000
93.7500
224200
eyeh-varpipeINDELD16_PLUSmap_l100_m2_e0homalt
55.1724
50.0000
61.5385
90.5109
88855
100.0000
dgrover-gatkINDELD6_15map_l100_m2_e0*
96.1832
95.4545
96.9231
88.0624
2521225282
25.0000
dgrover-gatkINDELD6_15map_l100_m2_e0het
95.8491
96.9466
94.7761
90.6750
127412772
28.5714
dgrover-gatkINDELD6_15map_l100_m2_e0hetalt
95.4545
92.6471
98.4375
74.4000
6356310
0.0000
dgrover-gatkINDELD6_15map_l100_m2_e0homalt
97.6378
95.3846
100.0000
87.3727
6236200
dgrover-gatkINDELI6_15map_l100_m2_e0*
96.4912
94.8276
98.2143
88.8000
110611021
50.0000
dgrover-gatkINDELI6_15map_l100_m2_e0het
95.8678
95.0820
96.6667
89.2665
5835821
50.0000
dgrover-gatkINDELI6_15map_l100_m2_e0hetalt
95.2381
90.9091
100.0000
83.6066
2022000
dgrover-gatkINDELI6_15map_l100_m2_e0homalt
98.4615
96.9697
100.0000
89.9687
3213200
dgrover-gatkSNP*map_l100_m2_e0*
99.4963
99.4795
99.5130
68.3628
735793857356836079
21.9444
dgrover-gatkSNP*map_l100_m2_e0het
99.3701
99.4698
99.2707
71.6313
461532464614233963
18.5841
dgrover-gatkSNP*map_l100_m2_e0hetalt
98.7952
97.6190
100.0000
73.7179
4114100
dgrover-gatkSNP*map_l100_m2_e0homalt
99.7105
99.4986
99.9234
60.6643
27385138273852116
76.1905
dgrover-gatkSNPtimap_l100_m2_e0*
99.5249
99.4730
99.5767
67.5957
487032584869620750
24.1546
dgrover-gatkSNPtimap_l100_m2_e0het
99.4042
99.4416
99.3668
70.9135
304511713044419439
20.1031
dgrover-gatkSNPtimap_l100_m2_e0hetalt
100.0000
100.0000
100.0000
70.5882
3003000
dgrover-gatkSNPtimap_l100_m2_e0homalt
99.7264
99.5248
99.9287
59.9046
1822287182221311
84.6154
dgrover-gatkSNPtvmap_l100_m2_e0*
99.4410
99.4927
99.3893
69.7626
249061272490215329
18.9542
dgrover-gatkSNPtvmap_l100_m2_e0het
99.3042
99.5246
99.0848
72.9235
15702751569814524
16.5517
dgrover-gatkSNPtvmap_l100_m2_e0hetalt
98.7952
97.6190
100.0000
73.7179
4114100
dgrover-gatkSNPtvmap_l100_m2_e0homalt
99.6791
99.4465
99.9128
62.0923
916351916385
62.5000
dgrover-gatkINDELI1_5map_l100_m2_e0*
98.9764
98.8304
99.1228
85.1466
1352161356124
33.3333
dgrover-gatkINDELI1_5map_l100_m2_e0het
98.7364
98.3607
99.1150
86.3291
7801378470
0.0000
dgrover-gatkINDELI1_5map_l100_m2_e0hetalt
97.6744
95.4545
100.0000
89.6552
4224200
dgrover-gatkINDELI1_5map_l100_m2_e0homalt
99.4371
99.8117
99.0654
82.2730
530153054
80.0000
dgrover-gatkINDELD1_5map_l100_m2_e0*
98.8260
98.7990
98.8530
85.3498
1892231896225
22.7273
dgrover-gatkINDELD1_5map_l100_m2_e0het
98.6907
98.8854
98.4968
85.5954
1242141245193
15.7895
dgrover-gatkINDELD1_5map_l100_m2_e0hetalt
94.6463
91.6667
97.8261
90.8367
4444510
0.0000
dgrover-gatkINDELD1_5map_l100_m2_e0homalt
99.4258
99.1817
99.6711
84.0629
606560622
100.0000
dgrover-gatkINDELI16_PLUSmap_l100_m2_e0*
90.5660
92.3077
88.8889
96.0926
2422430
0.0000
dgrover-gatkINDELI16_PLUSmap_l100_m2_e0het
94.4444
94.4444
94.4444
95.2756
1711710
0.0000
dgrover-gatkINDELI16_PLUSmap_l100_m2_e0hetalt
80.0000
66.6667
100.0000
93.7500
21200
dgrover-gatkINDELI16_PLUSmap_l100_m2_e0homalt
83.3333
100.0000
71.4286
97.4820
50520
0.0000
ckim-isaacINDELI1_5map_l100_m2_e0*
85.4172
75.1462
98.9403
84.3863
10283401027115
45.4545
ckim-isaacINDELI1_5map_l100_m2_e0het
89.3971
81.3367
99.2308
86.3273
64514864551
20.0000
ckim-isaacINDELI1_5map_l100_m2_e0hetalt
83.4783
75.0000
94.1176
88.4354
33113222
100.0000
ckim-isaacINDELI1_5map_l100_m2_e0homalt
79.0960
65.9134
98.8701
77.8750
35018135042
50.0000
ckim-isaacSNPtimap_l100_m2_e0*
80.3204
67.1841
99.8422
64.2807
3289416067328985210
19.2308
ckim-isaacSNPtimap_l100_m2_e0het
83.0715
71.1515
99.7894
67.1619
21788883421792464
8.6957
ckim-isaacSNPtimap_l100_m2_e0hetalt
75.0000
60.0000
100.0000
75.3425
18121800
ckim-isaacSNPtimap_l100_m2_e0homalt
75.4234
60.5604
99.9549
56.7558
1108872211108855
100.0000
ckim-isaacSNPtvmap_l100_m2_e0*
75.7866
61.1033
99.7587
67.3111
152969737152993712
32.4324
ckim-isaacSNPtvmap_l100_m2_e0het
79.2946
65.8300
99.6834
69.5147
10386539110389338
24.2424
ckim-isaacSNPtvmap_l100_m2_e0hetalt
72.7273
57.1429
100.0000
77.3585
24182400
ckim-isaacSNPtvmap_l100_m2_e0homalt
69.2951
53.0280
99.9591
61.2002
48864328488622
100.0000
ckim-vqsrINDEL*map_l100_m2_e0*
97.1833
96.6423
97.7304
89.4395
356912435748316
19.2771
ckim-vqsrINDEL*map_l100_m2_e0het
96.2758
95.7521
96.8053
90.9383
22099822127311
15.0685