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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 621 622 623 624 625 626 627 628 629 ... 1720 1721 » 31201-31250 / 86044 show all
ckim-gatk	INDEL	C1_5	map_l100_m2_e0	*		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-gatk	INDEL	C1_5	map_l100_m2_e0	het		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-gatk	INDEL	C1_5	map_l100_m2_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-gatk	INDEL	C1_5	map_l100_m2_e0	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-gatk	INDEL	C6_15	map_l100_m2_e0	*		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-gatk	INDEL	C6_15	map_l100_m2_e0	het		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-gatk	INDEL	C6_15	map_l100_m2_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-gatk	INDEL	C6_15	map_l100_m2_e0	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-dragen	SNP	tv	map_l100_m2_e0	*	98.6448	99.2929	98.0051	71.3118	24856	177	24859	506	45	8.8933
ckim-dragen	SNP	tv	map_l100_m2_e0	het	98.0513	99.1697	96.9579	75.2085	15646	131	15649	491	32	6.5173
ckim-dragen	SNP	tv	map_l100_m2_e0	hetalt	98.7952	97.6190	100.0000	81.1927	41	1	41	0	0
ckim-dragen	SNP	tv	map_l100_m2_e0	homalt	99.6739	99.5116	99.8367	60.2338	9169	45	9169	15	13	86.6667
ckim-dragen	INDEL	I6_15	map_l100_m2_e0	*	96.9697	96.5517	97.3913	88.8023	112	4	112	3	0	0.0000
ckim-dragen	INDEL	I6_15	map_l100_m2_e0	het	96.7213	96.7213	96.7213	89.9007	59	2	59	2	0	0.0000
ckim-dragen	INDEL	I6_15	map_l100_m2_e0	hetalt	95.2381	90.9091	100.0000	82.6087	20	2	20	0	0
ckim-dragen	INDEL	I6_15	map_l100_m2_e0	homalt	98.5075	100.0000	97.0588	88.9610	33	0	33	1	0	0.0000
ckim-dragen	SNP	ti	map_l100_m2_e0	*	98.6738	99.2954	98.0599	68.9474	48616	345	48624	962	107	11.1227
ckim-dragen	SNP	ti	map_l100_m2_e0	het	98.1149	99.2554	97.0004	73.1660	30394	228	30397	940	87	9.2553
ckim-dragen	SNP	ti	map_l100_m2_e0	hetalt	100.0000	100.0000	100.0000	77.9412	30	0	30	0	0
ckim-dragen	SNP	ti	map_l100_m2_e0	homalt	99.6194	99.3610	99.8792	57.3994	18192	117	18197	22	20	90.9091
ckim-gatk	INDEL	D1_5	map_l100_m2_e0	*	97.0041	98.7467	95.3219	88.2074	1891	24	1895	93	8	8.6022
ckim-gatk	INDEL	D1_5	map_l100_m2_e0	het	96.1099	99.1242	93.2735	89.2977	1245	11	1248	90	6	6.6667
ckim-gatk	INDEL	D1_5	map_l100_m2_e0	hetalt	90.9091	83.3333	100.0000	91.9922	40	8	41	0	0
ckim-gatk	INDEL	D1_5	map_l100_m2_e0	homalt	99.3443	99.1817	99.5074	84.1571	606	5	606	3	2	66.6667
ckim-gatk	INDEL	I1_5	map_l100_m2_e0	*	98.0091	98.7573	97.2721	88.0110	1351	17	1355	38	5	13.1579
ckim-gatk	INDEL	I1_5	map_l100_m2_e0	het	97.1459	98.3607	95.9608	90.0195	780	13	784	33	1	3.0303
ckim-gatk	INDEL	I1_5	map_l100_m2_e0	hetalt	96.4706	93.1818	100.0000	89.3782	41	3	41	0	0
ckim-gatk	INDEL	I1_5	map_l100_m2_e0	homalt	99.4371	99.8117	99.0654	82.4417	530	1	530	5	4	80.0000
ckim-gatk	INDEL	I6_15	map_l100_m2_e0	*	96.5217	95.6897	97.3684	90.3635	111	5	111	3	1	33.3333
ckim-gatk	INDEL	I6_15	map_l100_m2_e0	het	95.9350	96.7213	95.1613	91.7663	59	2	59	3	1	33.3333
ckim-gatk	INDEL	I6_15	map_l100_m2_e0	hetalt	95.2381	90.9091	100.0000	81.6514	20	2	20	0	0
ckim-gatk	INDEL	I6_15	map_l100_m2_e0	homalt	98.4615	96.9697	100.0000	90.0312	32	1	32	0	0
ckim-gatk	SNP	*	map_l100_m2_e0	*	89.4294	82.0710	98.2373	79.5869	60703	13261	60692	1089	86	7.8972
ckim-gatk	SNP	*	map_l100_m2_e0	het	92.3834	87.8381	97.4248	82.5144	40756	5643	40745	1077	78	7.2423
ckim-gatk	SNP	*	map_l100_m2_e0	hetalt	78.8732	66.6667	96.5517	90.1024	28	14	28	1	1	100.0000
ckim-gatk	SNP	*	map_l100_m2_e0	homalt	83.9525	72.3722	99.9448	68.4557	19919	7604	19919	11	7	63.6364
ckim-gatk	SNP	ti	map_l100_m2_e0	*	89.9645	82.7516	98.5549	78.4080	40516	8445	40509	594	70	11.7845
ckim-gatk	SNP	ti	map_l100_m2_e0	het	92.8437	88.2960	97.8852	81.4673	27038	3584	27031	584	62	10.6164
ckim-gatk	SNP	ti	map_l100_m2_e0	hetalt	80.7692	70.0000	95.4545	88.0435	21	9	21	1	1	100.0000
ckim-gatk	SNP	ti	map_l100_m2_e0	homalt	84.7018	73.4994	99.9332	67.2925	13457	4852	13457	9	7	77.7778
ckim-gatk	INDEL	I16_PLUS	map_l100_m2_e0	*	90.5660	92.3077	88.8889	96.4333	24	2	24	3	0	0.0000
ckim-gatk	INDEL	I16_PLUS	map_l100_m2_e0	het	91.8919	94.4444	89.4737	95.6522	17	1	17	2	0	0.0000
ckim-gatk	INDEL	I16_PLUS	map_l100_m2_e0	hetalt	80.0000	66.6667	100.0000	94.8718	2	1	2	0	0
ckim-gatk	INDEL	I16_PLUS	map_l100_m2_e0	homalt	90.9091	100.0000	83.3333	97.8648	5	0	5	1	0	0.0000
ckim-gatk	INDEL	D16_PLUS	map_l100_m2_e0	*	89.7297	92.2222	87.3684	95.8533	83	7	83	12	4	33.3333
ckim-gatk	INDEL	D16_PLUS	map_l100_m2_e0	het	88.0766	95.8333	81.4815	96.7606	46	2	44	10	4	40.0000
ckim-gatk	INDEL	D16_PLUS	map_l100_m2_e0	hetalt	91.6667	84.6154	100.0000	77.5701	22	4	24	0	0
ckim-gatk	INDEL	D16_PLUS	map_l100_m2_e0	homalt	90.9091	93.7500	88.2353	96.7118	15	1	15	2	0	0.0000
ckim-gatk	INDEL	D6_15	map_l100_m2_e0	*	95.6522	95.8333	95.4717	89.6927	253	11	253	12	2	16.6667
ckim-gatk	INDEL	D6_15	map_l100_m2_e0	het	94.0741	96.9466	91.3669	92.3416	127	4	127	12	2	16.6667

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