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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 604 605 606 607 608 609 610 611 612 ... 1720 1721 » 30351-30400 / 86044 show all
bgallagher-sentieon	INDEL	I16_PLUS	map_l100_m2_e0	homalt	83.3333	100.0000	71.4286	97.4910	5	0	5	2	0	0.0000
bgallagher-sentieon	INDEL	D16_PLUS	map_l100_m2_e0	*	87.3684	92.2222	83.0000	94.8823	83	7	83	17	4	23.5294
bgallagher-sentieon	INDEL	D16_PLUS	map_l100_m2_e0	het	86.3481	95.8333	78.5714	95.8854	46	2	44	12	4	33.3333
bgallagher-sentieon	INDEL	D16_PLUS	map_l100_m2_e0	hetalt	91.6667	84.6154	100.0000	79.3103	22	4	24	0	0
bgallagher-sentieon	INDEL	D16_PLUS	map_l100_m2_e0	homalt	83.3333	93.7500	75.0000	95.8071	15	1	15	5	0	0.0000
bgallagher-sentieon	INDEL	*	map_l100_m2_e0	*	98.3285	98.6461	98.0129	85.9953	3643	50	3650	74	17	22.9730
bgallagher-sentieon	INDEL	*	map_l100_m2_e0	het	98.0419	98.6129	97.4776	86.6167	2275	32	2280	59	11	18.6441
bgallagher-sentieon	INDEL	*	map_l100_m2_e0	hetalt	95.0068	91.2000	99.1453	86.4111	114	11	116	1	0	0.0000
bgallagher-sentieon	INDEL	*	map_l100_m2_e0	homalt	99.1696	99.4449	98.8959	84.6359	1254	7	1254	14	6	42.8571
bgallagher-sentieon	INDEL	C16_PLUS	map_l100_m2_e0	*		0.0000	0.0000	0.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	C16_PLUS	map_l100_m2_e0	het		0.0000	0.0000	0.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	C16_PLUS	map_l100_m2_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	C16_PLUS	map_l100_m2_e0	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	C6_15	map_l100_m2_e0	*		0.0000	0.0000	0.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	C6_15	map_l100_m2_e0	het		0.0000	0.0000	0.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	C6_15	map_l100_m2_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	C6_15	map_l100_m2_e0	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	I6_15	map_l100_m2_e0	*	96.4912	94.8276	98.2143	88.3817	110	6	110	2	1	50.0000
bgallagher-sentieon	INDEL	I6_15	map_l100_m2_e0	het	95.8678	95.0820	96.6667	88.7430	58	3	58	2	1	50.0000
bgallagher-sentieon	INDEL	I6_15	map_l100_m2_e0	hetalt	95.2381	90.9091	100.0000	82.3009	20	2	20	0	0
bgallagher-sentieon	INDEL	I6_15	map_l100_m2_e0	homalt	98.4615	96.9697	100.0000	89.9371	32	1	32	0	0
bgallagher-sentieon	SNP	*	map_l100_m2_e0	*	99.4275	99.5674	99.2880	67.0766	73644	320	73633	528	81	15.3409
bgallagher-sentieon	SNP	*	map_l100_m2_e0	het	99.2145	99.5129	98.9179	70.0977	46173	226	46162	505	63	12.4752
bgallagher-sentieon	SNP	*	map_l100_m2_e0	hetalt	97.5610	95.2381	100.0000	72.7891	40	2	40	0	0
bgallagher-sentieon	SNP	*	map_l100_m2_e0	homalt	99.7908	99.6657	99.9162	60.2352	27431	92	27431	23	18	78.2609
cchapple-custom	INDEL	*	map_l100_m2_e0	*	95.9812	96.4527	95.5142	84.7037	3562	131	3641	171	49	28.6550
cchapple-custom	INDEL	*	map_l100_m2_e0	het	95.1944	96.5756	93.8521	85.6721	2228	79	2412	158	40	25.3165
cchapple-custom	INDEL	*	map_l100_m2_e0	hetalt	0.0000	84.0000	0.0000	0.0000	105	20	0	0	0
cchapple-custom	INDEL	*	map_l100_m2_e0	homalt	98.2022	97.4623	98.9533	82.2165	1229	32	1229	13	9	69.2308
cchapple-custom	INDEL	C16_PLUS	map_l100_m2_e0	*		0.0000		100.0000	0	0	0	0	0
cchapple-custom	INDEL	C16_PLUS	map_l100_m2_e0	het		0.0000		100.0000	0	0	0	0	0
cchapple-custom	INDEL	C16_PLUS	map_l100_m2_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
cchapple-custom	INDEL	C16_PLUS	map_l100_m2_e0	homalt		0.0000		100.0000	0	0	0	0	0
cchapple-custom	INDEL	C1_5	map_l100_m2_e0	*	0.0000	0.0000	65.4545	95.2132	0	0	36	19	9	47.3684
cchapple-custom	INDEL	C1_5	map_l100_m2_e0	het	0.0000	0.0000	57.7778	95.0166	0	0	26	19	9	47.3684
cchapple-custom	INDEL	C1_5	map_l100_m2_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
cchapple-custom	INDEL	C1_5	map_l100_m2_e0	homalt	0.0000	0.0000	100.0000	95.9350	0	0	10	0	0
bgallagher-sentieon	SNP	tv	map_l100_m2_e0	*	99.3603	99.6045	99.1174	68.4796	24934	99	24930	222	31	13.9640
bgallagher-sentieon	SNP	tv	map_l100_m2_e0	het	99.1197	99.5817	98.6621	71.4019	15711	66	15707	213	25	11.7371
bgallagher-sentieon	SNP	tv	map_l100_m2_e0	hetalt	97.5610	95.2381	100.0000	72.7891	40	2	40	0	0
bgallagher-sentieon	SNP	tv	map_l100_m2_e0	homalt	99.7827	99.6636	99.9021	61.6697	9183	31	9183	9	6	66.6667
bgallagher-sentieon	INDEL	I1_5	map_l100_m2_e0	*	98.9412	98.9035	98.9788	84.3278	1353	15	1357	14	4	28.5714
bgallagher-sentieon	INDEL	I1_5	map_l100_m2_e0	het	98.6122	98.3607	98.8651	85.4415	780	13	784	9	0	0.0000
bgallagher-sentieon	INDEL	I1_5	map_l100_m2_e0	hetalt	97.6744	95.4545	100.0000	88.3333	42	2	42	0	0
bgallagher-sentieon	INDEL	I1_5	map_l100_m2_e0	homalt	99.5314	100.0000	99.0672	81.7749	531	0	531	5	4	80.0000
bgallagher-sentieon	SNP	ti	map_l100_m2_e0	*	99.4612	99.5466	99.3760	66.3096	48739	222	48732	306	50	16.3399
bgallagher-sentieon	SNP	ti	map_l100_m2_e0	het	99.2634	99.4775	99.0503	69.3746	30462	160	30455	292	38	13.0137
bgallagher-sentieon	SNP	ti	map_l100_m2_e0	hetalt	98.3051	96.6667	100.0000	70.4082	29	1	29	0	0
bgallagher-sentieon	SNP	ti	map_l100_m2_e0	homalt	99.7949	99.6668	99.9233	59.4718	18248	61	18248	14	12	85.7143
astatham-gatk	SNP	tv	map_l100_m2_e0	*	91.8266	85.0477	99.7797	71.9649	21290	3743	21286	47	16	34.0426

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