PrecisionFDA
Truth Challenge
Engage and improve DNA test results with our community challenges
Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
| Entry | Type | Subtype | Subset | Genotype | F-score | Recall | Precision | Frac_NA | Truth TP | Truth FN | Query TP | Query FP | FP gt | % FP ma | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
28051-28100 / 86044 show all | |||||||||||||||
| jli-custom | INDEL | C6_15 | map_l125_m0_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| jli-custom | INDEL | C6_15 | map_l125_m0_e0 | homalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| jli-custom | INDEL | D16_PLUS | map_l125_m0_e0 | * | 100.0000 | 100.0000 | 100.0000 | 96.0526 | 12 | 0 | 12 | 0 | 0 | ||
| jli-custom | INDEL | D16_PLUS | map_l125_m0_e0 | het | 100.0000 | 100.0000 | 100.0000 | 95.8525 | 9 | 0 | 9 | 0 | 0 | ||
| jli-custom | INDEL | D16_PLUS | map_l125_m0_e0 | hetalt | 100.0000 | 100.0000 | 100.0000 | 96.2963 | 1 | 0 | 1 | 0 | 0 | ||
| jli-custom | INDEL | D16_PLUS | map_l125_m0_e0 | homalt | 100.0000 | 100.0000 | 100.0000 | 96.6667 | 2 | 0 | 2 | 0 | 0 | ||
| jli-custom | INDEL | I16_PLUS | map_l125_m0_e0 | * | 92.3077 | 100.0000 | 85.7143 | 96.5000 | 6 | 0 | 6 | 1 | 0 | 0.0000 | |
| jli-custom | INDEL | I16_PLUS | map_l125_m0_e0 | het | 85.7143 | 100.0000 | 75.0000 | 93.3333 | 3 | 0 | 3 | 1 | 0 | 0.0000 | |
| jli-custom | INDEL | I16_PLUS | map_l125_m0_e0 | hetalt | 100.0000 | 100.0000 | 100.0000 | 83.3333 | 1 | 0 | 1 | 0 | 0 | ||
| jli-custom | INDEL | I16_PLUS | map_l125_m0_e0 | homalt | 100.0000 | 100.0000 | 100.0000 | 98.5075 | 2 | 0 | 2 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | D1_5 | map_l125_m0_e0 | * | 97.7751 | 97.3790 | 98.1744 | 86.5042 | 483 | 13 | 484 | 9 | 2 | 22.2222 | |
| raldana-dualsentieon | INDEL | D1_5 | map_l125_m0_e0 | het | 97.6774 | 97.3913 | 97.9651 | 86.4780 | 336 | 9 | 337 | 7 | 0 | 0.0000 | |
| raldana-dualsentieon | INDEL | D1_5 | map_l125_m0_e0 | hetalt | 100.0000 | 100.0000 | 100.0000 | 97.0588 | 3 | 0 | 3 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | D1_5 | map_l125_m0_e0 | homalt | 97.9592 | 97.2973 | 98.6301 | 85.5015 | 144 | 4 | 144 | 2 | 2 | 100.0000 | |
| raldana-dualsentieon | INDEL | * | map_l125_m0_e0 | hetalt | 95.2381 | 90.9091 | 100.0000 | 94.2197 | 10 | 1 | 10 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | * | map_l125_m0_e0 | homalt | 98.0600 | 97.8873 | 98.2332 | 86.1002 | 278 | 6 | 278 | 5 | 3 | 60.0000 | |
| raldana-dualsentieon | INDEL | C16_PLUS | map_l125_m0_e0 | * | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| raldana-dualsentieon | INDEL | C16_PLUS | map_l125_m0_e0 | het | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| raldana-dualsentieon | INDEL | C16_PLUS | map_l125_m0_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| raldana-dualsentieon | INDEL | C16_PLUS | map_l125_m0_e0 | homalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| raldana-dualsentieon | INDEL | I16_PLUS | map_l125_m0_e0 | * | 90.9091 | 83.3333 | 100.0000 | 96.4286 | 5 | 1 | 5 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | I16_PLUS | map_l125_m0_e0 | het | 80.0000 | 66.6667 | 100.0000 | 97.1429 | 2 | 1 | 2 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | I16_PLUS | map_l125_m0_e0 | hetalt | 100.0000 | 100.0000 | 100.0000 | 50.0000 | 1 | 0 | 1 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | I16_PLUS | map_l125_m0_e0 | homalt | 100.0000 | 100.0000 | 100.0000 | 97.0588 | 2 | 0 | 2 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | D16_PLUS | map_l125_m0_e0 | * | 92.3077 | 100.0000 | 85.7143 | 95.0355 | 12 | 0 | 12 | 2 | 0 | 0.0000 | |
| raldana-dualsentieon | INDEL | D16_PLUS | map_l125_m0_e0 | het | 90.0000 | 100.0000 | 81.8182 | 94.3590 | 9 | 0 | 9 | 2 | 0 | 0.0000 | |
| raldana-dualsentieon | INDEL | D16_PLUS | map_l125_m0_e0 | hetalt | 100.0000 | 100.0000 | 100.0000 | 94.7368 | 1 | 0 | 1 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | D16_PLUS | map_l125_m0_e0 | homalt | 100.0000 | 100.0000 | 100.0000 | 97.0588 | 2 | 0 | 2 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | C1_5 | map_l125_m0_e0 | * | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| raldana-dualsentieon | INDEL | C1_5 | map_l125_m0_e0 | het | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| raldana-dualsentieon | INDEL | C1_5 | map_l125_m0_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| raldana-dualsentieon | INDEL | C1_5 | map_l125_m0_e0 | homalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| raldana-dualsentieon | INDEL | C6_15 | map_l125_m0_e0 | * | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| raldana-dualsentieon | INDEL | C6_15 | map_l125_m0_e0 | het | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| raldana-dualsentieon | INDEL | C6_15 | map_l125_m0_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| raldana-dualsentieon | INDEL | C6_15 | map_l125_m0_e0 | homalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| raldana-dualsentieon | INDEL | D6_15 | map_l125_m0_e0 | * | 97.8261 | 95.7447 | 100.0000 | 91.1417 | 45 | 2 | 45 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | D6_15 | map_l125_m0_e0 | het | 98.2456 | 96.5517 | 100.0000 | 91.5916 | 28 | 1 | 28 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | D6_15 | map_l125_m0_e0 | hetalt | 90.9091 | 83.3333 | 100.0000 | 86.8421 | 5 | 1 | 5 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | D6_15 | map_l125_m0_e0 | homalt | 100.0000 | 100.0000 | 100.0000 | 91.2409 | 12 | 0 | 12 | 0 | 0 | ||
| ndellapenna-hhga | INDEL | * | map_l125_m0_e0 | * | 97.2788 | 97.1655 | 97.3923 | 98.8463 | 857 | 25 | 859 | 23 | 6 | 26.0870 | |
| ndellapenna-hhga | INDEL | * | map_l125_m0_e0 | het | 96.9382 | 96.7632 | 97.1138 | 88.6556 | 568 | 19 | 572 | 17 | 2 | 11.7647 | |
| ndellapenna-hhga | INDEL | * | map_l125_m0_e0 | hetalt | 90.0000 | 81.8182 | 100.0000 | 96.7890 | 9 | 2 | 7 | 0 | 0 | ||
| ndellapenna-hhga | INDEL | * | map_l125_m0_e0 | homalt | 98.2456 | 98.5915 | 97.9021 | 86.6480 | 280 | 4 | 280 | 6 | 4 | 66.6667 | |
| mlin-fermikit | INDEL | I1_5 | map_l125_m0_e0 | * | 57.0815 | 42.9032 | 85.2564 | 80.1020 | 133 | 177 | 133 | 23 | 21 | 91.3043 | |
| mlin-fermikit | INDEL | I1_5 | map_l125_m0_e0 | het | 51.5385 | 34.8958 | 98.5294 | 81.9629 | 67 | 125 | 67 | 1 | 0 | 0.0000 | |
| mlin-fermikit | INDEL | I1_5 | map_l125_m0_e0 | hetalt | 0.0000 | 100.0000 | 0 | 4 | 0 | 0 | 0 | ||||
| mlin-fermikit | INDEL | I1_5 | map_l125_m0_e0 | homalt | 65.3465 | 57.8947 | 75.0000 | 76.9029 | 66 | 48 | 66 | 22 | 21 | 95.4545 | |
| mlin-fermikit | INDEL | I6_15 | map_l125_m0_e0 | * | 42.8571 | 33.3333 | 60.0000 | 89.0110 | 5 | 10 | 6 | 4 | 3 | 75.0000 | |
| mlin-fermikit | INDEL | I6_15 | map_l125_m0_e0 | het | 47.0588 | 33.3333 | 80.0000 | 89.3617 | 3 | 6 | 4 | 1 | 0 | 0.0000 | |