PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
26101-26150 / 86044 show all
hfeng-pmm1INDELI6_15map_l125_m1_e0*
89.7959
83.0189
97.7778
90.5263
4494411
100.0000
hfeng-pmm1INDELI6_15map_l125_m1_e0het
85.1852
76.6667
95.8333
91.0448
2372311
100.0000
hfeng-pmm1INDELI6_15map_l125_m1_e0hetalt
93.3333
87.5000
100.0000
88.5246
71700
hfeng-pmm1INDELI6_15map_l125_m1_e0homalt
96.5517
93.3333
100.0000
90.4110
1411400
hfeng-pmm1SNPtvmap_l125_m1_e0*
99.4714
99.2945
99.6491
69.3117
15903113159015616
28.5714
hfeng-pmm1SNPtvmap_l125_m1_e0het
99.2869
99.0026
99.5728
70.2971
10025101100234311
25.5814
hfeng-pmm1SNPtvmap_l125_m1_e0hetalt
100.0000
100.0000
100.0000
77.6119
3003000
hfeng-pmm1SNPtvmap_l125_m1_e0homalt
99.7867
99.7952
99.7782
67.3918
5848125848135
38.4615
hfeng-pmm1INDELI1_5map_l125_m1_e0*
98.6079
98.0723
99.1495
84.7395
8141681672
28.5714
hfeng-pmm1INDELI1_5map_l125_m1_e0het
97.9184
96.7078
99.1597
85.5451
4701647240
0.0000
hfeng-pmm1INDELI1_5map_l125_m1_e0hetalt
100.0000
100.0000
100.0000
93.2540
1701700
hfeng-pmm1INDELI1_5map_l125_m1_e0homalt
99.5434
100.0000
99.0909
82.1429
327032732
66.6667
hfeng-pmm1SNPtimap_l125_m1_e0*
99.4515
99.2091
99.6951
68.8149
29103232290998925
28.0899
hfeng-pmm1SNPtimap_l125_m1_e0het
99.2306
98.8613
99.6028
70.2477
18058208180547218
25.0000
hfeng-pmm1SNPtimap_l125_m1_e0hetalt
100.0000
100.0000
100.0000
71.0843
2402400
hfeng-pmm1SNPtimap_l125_m1_e0homalt
99.8143
99.7827
99.8460
66.1307
110212411021177
41.1765
ghariani-varprowlINDELC6_15map_l125_m1_e0*
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC6_15map_l125_m1_e0het
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC6_15map_l125_m1_e0hetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC6_15map_l125_m1_e0homalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDEL*map_l125_m1_e0*
91.7859
94.3996
89.3130
93.6193
1989118198923877
32.3529
ghariani-varprowlINDEL*map_l125_m1_e0het
91.1754
97.9026
85.3133
91.4837
130728130722573
32.4444
ghariani-varprowlINDEL*map_l125_m1_e0hetalt
0.0000
0.0000
0.0000
040000
ghariani-varprowlINDEL*map_l125_m1_e0homalt
95.5851
93.1694
98.1295
82.8225
68250682134
30.7692
gduggal-snapvardINDELI6_15map_l125_m1_e0*
59.6747
64.1509
55.7823
82.2678
3419826550
76.9231
gduggal-snapvardINDELI6_15map_l125_m1_e0het
65.6975
86.6667
52.8986
82.1244
264736550
76.9231
gduggal-snapvardINDELI6_15map_l125_m1_e0hetalt
0.0000
50.0000
0.0000
0.0000
44000
gduggal-snapvardINDELI6_15map_l125_m1_e0homalt
42.1053
26.6667
100.0000
84.2105
411900
gduggal-snapvardSNPtvmap_l125_m1_e0*
93.0563
96.9343
89.4767
78.3907
15525491154751820120
6.5934
gduggal-snapvardSNPtvmap_l125_m1_e0het
90.5242
97.5015
84.4788
81.5577
987325398461809112
6.1913
gduggal-snapvardSNPtvmap_l125_m1_e0hetalt
0.0000
0.0000
0.0000
030000
gduggal-snapvardSNPtvmap_l125_m1_e0homalt
98.0991
96.4505
99.8050
66.5043
56522085629118
72.7273
ghariani-varprowlINDELC1_5map_l125_m1_e0*
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC1_5map_l125_m1_e0het
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC1_5map_l125_m1_e0hetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC1_5map_l125_m1_e0homalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardSNP*map_l125_m1_e0*
93.5846
96.5275
90.8158
77.9328
437531574431824367333
7.6254
gduggal-snapvardSNP*map_l125_m1_e0het
91.2586
96.8794
86.2542
81.2481
27506886271834332306
7.0637
gduggal-snapvardSNP*map_l125_m1_e0hetalt
0.0000
0.0000
0.0000
030000
gduggal-snapvardSNP*map_l125_m1_e0homalt
97.9102
96.1077
99.7817
66.1808
16247658159993527
77.1429
gduggal-snapvardSNPtimap_l125_m1_e0*
93.7547
96.2264
91.4068
77.7724
282281107279652629225
8.5584
gduggal-snapvardSNPtimap_l125_m1_e0het
91.5438
96.5345
87.0437
81.1544
17633633175012605206
7.9079
gduggal-snapvardSNPtimap_l125_m1_e0hetalt
0.0000
0.0000
0.0000
024000
gduggal-snapvardSNPtimap_l125_m1_e0homalt
97.8107
95.9258
99.7712
66.1153
10595450104642419
79.1667
ghariani-varprowlINDELC16_PLUSmap_l125_m1_e0*
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC16_PLUSmap_l125_m1_e0het
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC16_PLUSmap_l125_m1_e0hetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC16_PLUSmap_l125_m1_e0homalt
0.0000
0.0000
0.0000
00000
gduggal-snapplatINDELD6_15map_l125_m1_e0*
45.1325
31.6239
78.7879
95.2518
37802671
14.2857
gduggal-snapplatINDELD6_15map_l125_m1_e0het
47.3921
35.9375
69.5652
94.6882
23411671
14.2857