PrecisionFDA
Truth Challenge
Engage and improve DNA test results with our community challenges
Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
| Entry | Type | Subtype | Subset | Genotype | F-score | Recall | Precision | Frac_NA | Truth TP | Truth FN | Query TP | Query FP | FP gt | % FP ma | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
19651-19700 / 86044 show all | |||||||||||||||
| ckim-dragen | INDEL | I16_PLUS | map_l150_m0_e0 | hetalt | 100.0000 | 100.0000 | 100.0000 | 83.3333 | 1 | 0 | 1 | 0 | 0 | ||
| ckim-dragen | INDEL | I16_PLUS | map_l150_m0_e0 | homalt | 100.0000 | 100.0000 | 100.0000 | 94.4444 | 1 | 0 | 1 | 0 | 0 | ||
| ckim-dragen | INDEL | C1_5 | map_l150_m0_e0 | * | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| ckim-dragen | INDEL | C1_5 | map_l150_m0_e0 | het | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| ckim-dragen | INDEL | C1_5 | map_l150_m0_e0 | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| ckim-dragen | INDEL | C1_5 | map_l150_m0_e0 | homalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| ckim-dragen | INDEL | D1_5 | map_l150_m0_e0 | * | 96.2329 | 97.2318 | 95.2542 | 91.7736 | 281 | 8 | 281 | 14 | 2 | 14.2857 | |
| ckim-dragen | INDEL | D1_5 | map_l150_m0_e0 | het | 95.6311 | 97.5248 | 93.8095 | 92.1023 | 197 | 5 | 197 | 13 | 1 | 7.6923 | |
| ckim-dragen | INDEL | D1_5 | map_l150_m0_e0 | hetalt | 66.6667 | 50.0000 | 100.0000 | 98.8235 | 1 | 1 | 1 | 0 | 0 | ||
| ckim-dragen | INDEL | D1_5 | map_l150_m0_e0 | homalt | 98.2249 | 97.6471 | 98.8095 | 90.0238 | 83 | 2 | 83 | 1 | 1 | 100.0000 | |
| ckim-dragen | INDEL | C16_PLUS | map_l150_m0_e0 | * | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| ckim-dragen | INDEL | C16_PLUS | map_l150_m0_e0 | het | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| ckim-dragen | INDEL | C16_PLUS | map_l150_m0_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| ckim-dragen | INDEL | C16_PLUS | map_l150_m0_e0 | homalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| ckim-dragen | INDEL | I1_5 | map_l150_m0_e0 | * | 96.5632 | 96.0227 | 97.1098 | 92.4056 | 169 | 7 | 168 | 5 | 2 | 40.0000 | |
| ckim-dragen | INDEL | I1_5 | map_l150_m0_e0 | het | 95.6938 | 94.3396 | 97.0874 | 93.7764 | 100 | 6 | 100 | 3 | 0 | 0.0000 | |
| ckim-dragen | INDEL | I1_5 | map_l150_m0_e0 | hetalt | 80.0000 | 66.6667 | 100.0000 | 96.5517 | 2 | 1 | 2 | 0 | 0 | ||
| ckim-dragen | INDEL | I1_5 | map_l150_m0_e0 | homalt | 98.5075 | 100.0000 | 97.0588 | 87.9646 | 67 | 0 | 66 | 2 | 2 | 100.0000 | |
| ckim-dragen | INDEL | D16_PLUS | map_l150_m0_e0 | * | 82.3529 | 100.0000 | 70.0000 | 97.6581 | 7 | 0 | 7 | 3 | 0 | 0.0000 | |
| ckim-dragen | INDEL | D16_PLUS | map_l150_m0_e0 | het | 82.3529 | 100.0000 | 70.0000 | 96.8944 | 7 | 0 | 7 | 3 | 0 | 0.0000 | |
| ckim-dragen | INDEL | D16_PLUS | map_l150_m0_e0 | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| ckim-dragen | INDEL | D16_PLUS | map_l150_m0_e0 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| gduggal-snapvard | INDEL | D16_PLUS | map_l150_m0_e0 | * | 54.5455 | 42.8571 | 75.0000 | 89.1892 | 3 | 4 | 3 | 1 | 0 | 0.0000 | |
| gduggal-snapvard | INDEL | D16_PLUS | map_l150_m0_e0 | het | 54.5455 | 42.8571 | 75.0000 | 88.2353 | 3 | 4 | 3 | 1 | 0 | 0.0000 | |
| gduggal-snapvard | INDEL | D16_PLUS | map_l150_m0_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| gduggal-snapvard | INDEL | D16_PLUS | map_l150_m0_e0 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| gduggal-snapvard | INDEL | I16_PLUS | map_l150_m0_e0 | * | 0.0000 | 0.0000 | 100.0000 | 93.9394 | 0 | 4 | 2 | 0 | 0 | ||
| gduggal-snapvard | INDEL | I16_PLUS | map_l150_m0_e0 | het | 0.0000 | 0.0000 | 100.0000 | 93.9394 | 0 | 2 | 2 | 0 | 0 | ||
| gduggal-snapvard | INDEL | I16_PLUS | map_l150_m0_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 1 | 0 | 0 | 0 | |||
| gduggal-snapvard | INDEL | I16_PLUS | map_l150_m0_e0 | homalt | 0.0000 | 0.0000 | 0.0000 | 0 | 1 | 0 | 0 | 0 | |||
| gduggal-snapvard | INDEL | C6_15 | map_l150_m0_e0 | * | 0.0000 | 0.0000 | 98.3193 | 0 | 0 | 0 | 2 | 0 | 0.0000 | ||
| gduggal-snapvard | INDEL | C6_15 | map_l150_m0_e0 | het | 0.0000 | 0.0000 | 98.0769 | 0 | 0 | 0 | 2 | 0 | 0.0000 | ||
| gduggal-snapvard | INDEL | C6_15 | map_l150_m0_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| gduggal-snapvard | INDEL | C6_15 | map_l150_m0_e0 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| gduggal-snapvard | INDEL | D6_15 | map_l150_m0_e0 | * | 81.3226 | 81.2500 | 81.3953 | 92.2662 | 26 | 6 | 35 | 8 | 4 | 50.0000 | |
| gduggal-snapvard | INDEL | D6_15 | map_l150_m0_e0 | het | 81.8620 | 85.0000 | 78.9474 | 92.4453 | 17 | 3 | 30 | 8 | 4 | 50.0000 | |
| gduggal-snapvard | INDEL | D6_15 | map_l150_m0_e0 | hetalt | 0.0000 | 60.0000 | 0.0000 | 0.0000 | 3 | 2 | 0 | 0 | 0 | ||
| gduggal-snapvard | INDEL | D6_15 | map_l150_m0_e0 | homalt | 92.3077 | 85.7143 | 100.0000 | 90.5660 | 6 | 1 | 5 | 0 | 0 | ||
| gduggal-snapvard | INDEL | C1_5 | map_l150_m0_e0 | * | 0.0000 | 0.0000 | 25.0000 | 96.2425 | 0 | 0 | 11 | 33 | 3 | 9.0909 | |
| gduggal-snapvard | INDEL | C1_5 | map_l150_m0_e0 | het | 0.0000 | 0.0000 | 15.3846 | 96.1576 | 0 | 0 | 6 | 33 | 3 | 9.0909 | |
| gduggal-snapvard | INDEL | C1_5 | map_l150_m0_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| gduggal-snapvard | INDEL | C1_5 | map_l150_m0_e0 | homalt | 0.0000 | 0.0000 | 100.0000 | 96.7949 | 0 | 0 | 5 | 0 | 0 | ||
| gduggal-snapvard | INDEL | I1_5 | map_l150_m0_e0 | * | 87.1622 | 93.1818 | 81.8731 | 92.8122 | 164 | 12 | 271 | 60 | 15 | 25.0000 | |
| gduggal-snapvard | INDEL | I1_5 | map_l150_m0_e0 | het | 85.2218 | 98.1132 | 75.3247 | 93.9718 | 104 | 2 | 174 | 57 | 14 | 24.5614 | |
| gduggal-snapvard | INDEL | I1_5 | map_l150_m0_e0 | hetalt | 0.0000 | 33.3333 | 0.0000 | 0.0000 | 1 | 2 | 0 | 0 | 0 | ||
| gduggal-snapvard | INDEL | I1_5 | map_l150_m0_e0 | homalt | 92.3139 | 88.0597 | 97.0000 | 87.0634 | 59 | 8 | 97 | 3 | 1 | 33.3333 | |
| gduggal-snapvard | INDEL | D1_5 | map_l150_m0_e0 | * | 83.0230 | 95.8478 | 73.2252 | 92.0420 | 277 | 12 | 361 | 132 | 21 | 15.9091 | |
| gduggal-snapvard | INDEL | D1_5 | map_l150_m0_e0 | het | 79.3587 | 98.0198 | 66.6667 | 92.5863 | 198 | 4 | 262 | 131 | 20 | 15.2672 | |
| gduggal-snapvard | INDEL | D1_5 | map_l150_m0_e0 | hetalt | 0.0000 | 100.0000 | 0.0000 | 0.0000 | 2 | 0 | 0 | 0 | 0 | ||
| gduggal-snapvard | INDEL | D1_5 | map_l150_m0_e0 | homalt | 94.6075 | 90.5882 | 99.0000 | 88.8143 | 77 | 8 | 99 | 1 | 1 | 100.0000 | |