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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 353 354 355 356 357 358 359 360 361 ... 1720 1721 » 17801-17850 / 86044 show all
jli-custom	SNP	*	map_l150_m1_e0	*	99.1511	98.8337	99.4706	71.1384	30252	357	30249	161	58	36.0248
jli-custom	SNP	*	map_l150_m1_e0	het	98.8306	98.4521	99.2121	72.9358	19017	299	19014	151	48	31.7881
jli-custom	SNP	*	map_l150_m1_e0	hetalt	100.0000	100.0000	100.0000	78.4946	20	0	20	0	0
jli-custom	SNP	*	map_l150_m1_e0	homalt	99.6978	99.4855	99.9109	67.4251	11215	58	11215	10	10	100.0000
jli-custom	SNP	tv	map_l150_m1_e0	*	99.0626	98.7812	99.3456	71.0917	10779	133	10778	71	23	32.3944
jli-custom	SNP	tv	map_l150_m1_e0	het	98.7145	98.4020	99.0291	72.7212	6835	111	6834	67	19	28.3582
jli-custom	SNP	tv	map_l150_m1_e0	hetalt	100.0000	100.0000	100.0000	78.4946	20	0	20	0	0
jli-custom	SNP	tv	map_l150_m1_e0	homalt	99.6698	99.4425	99.8982	67.6388	3924	22	3924	4	4	100.0000
jlack-gatk	INDEL	*	map_l150_m1_e0	*	93.5297	98.0568	89.4022	92.0707	1312	26	1316	156	9	5.7692
jlack-gatk	INDEL	*	map_l150_m1_e0	het	91.0230	98.0117	84.9647	93.0437	838	17	842	149	6	4.0269
jlack-gatk	INDEL	*	map_l150_m1_e0	hetalt	92.6829	90.4762	95.0000	95.2830	19	2	19	1	0	0.0000
jlack-gatk	INDEL	*	map_l150_m1_e0	homalt	98.5915	98.4848	98.6985	88.1613	455	7	455	6	3	50.0000
jlack-gatk	INDEL	C6_15	map_l150_m1_e0	*		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	C6_15	map_l150_m1_e0	het		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	C6_15	map_l150_m1_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	C6_15	map_l150_m1_e0	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	D16_PLUS	map_l150_m1_e0	*	84.8485	93.3333	77.7778	97.3451	14	1	14	4	1	25.0000
jlack-gatk	INDEL	D16_PLUS	map_l150_m1_e0	het	93.3333	100.0000	87.5000	96.9697	14	0	14	2	0	0.0000
jlack-gatk	INDEL	D16_PLUS	map_l150_m1_e0	hetalt		0.0000	0.0000	96.6667	0	1	0	1	0	0.0000
jlack-gatk	INDEL	D16_PLUS	map_l150_m1_e0	homalt		0.0000	0.0000	99.1667	0	0	0	1	1	100.0000
jlack-gatk	INDEL	D1_5	map_l150_m1_e0	*	92.6175	98.6053	87.3153	91.1605	707	10	709	103	4	3.8835
jlack-gatk	INDEL	D1_5	map_l150_m1_e0	het	89.8669	98.9627	82.3024	91.9768	477	5	479	103	4	3.8835
jlack-gatk	INDEL	D1_5	map_l150_m1_e0	hetalt	92.3077	85.7143	100.0000	97.4895	6	1	6	0	0
jlack-gatk	INDEL	D1_5	map_l150_m1_e0	homalt	99.1150	98.2456	100.0000	86.7690	224	4	224	0	0
jlack-gatk	INDEL	C1_5	map_l150_m1_e0	*		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	C1_5	map_l150_m1_e0	het		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	C1_5	map_l150_m1_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	C1_5	map_l150_m1_e0	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
hfeng-pmm3	SNP	tv	map_l150_m1_e0	*	99.3718	99.3127	99.4310	74.1360	10837	75	10835	62	9	14.5161
hfeng-pmm3	SNP	tv	map_l150_m1_e0	het	99.2002	99.1218	99.2788	75.3081	6885	61	6883	50	5	10.0000
hfeng-pmm3	SNP	tv	map_l150_m1_e0	hetalt	100.0000	100.0000	100.0000	81.3084	20	0	20	0	0
hfeng-pmm3	SNP	tv	map_l150_m1_e0	homalt	99.6705	99.6452	99.6957	71.7215	3932	14	3932	12	4	33.3333
jlack-gatk	INDEL	C16_PLUS	map_l150_m1_e0	*		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	C16_PLUS	map_l150_m1_e0	het		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	C16_PLUS	map_l150_m1_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	C16_PLUS	map_l150_m1_e0	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
hfeng-pmm2	INDEL	C1_5	map_l150_m1_e0	*		0.0000	0.0000	0.0000	0	0	0	0	0
hfeng-pmm2	INDEL	C1_5	map_l150_m1_e0	het		0.0000	0.0000	0.0000	0	0	0	0	0
hfeng-pmm2	INDEL	C1_5	map_l150_m1_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
hfeng-pmm2	INDEL	C1_5	map_l150_m1_e0	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
hfeng-pmm2	INDEL	D6_15	map_l150_m1_e0	*	99.3103	98.6301	100.0000	92.0792	72	1	72	0	0
hfeng-pmm2	INDEL	D6_15	map_l150_m1_e0	het	100.0000	100.0000	100.0000	93.6995	39	0	39	0	0
hfeng-pmm2	INDEL	D6_15	map_l150_m1_e0	hetalt	100.0000	100.0000	100.0000	90.2439	8	0	8	0	0
hfeng-pmm2	INDEL	D6_15	map_l150_m1_e0	homalt	98.0392	96.1538	100.0000	87.9808	25	1	25	0	0
hfeng-pmm2	INDEL	I16_PLUS	map_l150_m1_e0	*	90.9091	90.9091	90.9091	96.6463	10	1	10	1	0	0.0000
hfeng-pmm2	INDEL	I16_PLUS	map_l150_m1_e0	het	92.3077	100.0000	85.7143	95.8824	6	0	6	1	0	0.0000
hfeng-pmm2	INDEL	I16_PLUS	map_l150_m1_e0	hetalt	66.6667	50.0000	100.0000	93.3333	1	1	1	0	0
hfeng-pmm2	INDEL	I16_PLUS	map_l150_m1_e0	homalt	100.0000	100.0000	100.0000	97.9021	3	0	3	0	0
hfeng-pmm2	INDEL	I1_5	map_l150_m1_e0	*	98.4256	98.6166	98.2353	89.2541	499	7	501	9	2	22.2222
hfeng-pmm2	INDEL	I1_5	map_l150_m1_e0	het	97.8291	97.6589	98.0000	90.4943	292	7	294	6	0	0.0000

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