PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
11151-11200 / 86044 show all
ciseli-customINDEL*map_l250_m1_e0hetalt
0.0000
0.0000
0.0000
06000
ciseli-customINDEL*map_l250_m1_e0homalt
59.4286
47.7064
78.7879
96.7977
525752148
57.1429
ciseli-customINDELC16_PLUSmap_l250_m1_e0*
0.0000
100.0000
00000
ciseli-customINDELC16_PLUSmap_l250_m1_e0het
0.0000
100.0000
00000
ciseli-customINDELC16_PLUSmap_l250_m1_e0hetalt
0.0000
0.0000
0.0000
00000
ciseli-customINDELC16_PLUSmap_l250_m1_e0homalt
0.0000
100.0000
00000
cchapple-customSNPtvmap_l250_m1_e0*
95.5601
95.6177
95.5026
89.6633
2531116252711924
20.1681
cchapple-customSNPtvmap_l250_m1_e0het
94.4921
95.5232
93.4830
91.0657
170780170711924
20.1681
cchapple-customSNPtvmap_l250_m1_e0hetalt
0.0000
100.0000
0.0000
0.0000
40000
cchapple-customSNPtvmap_l250_m1_e0homalt
97.8520
95.7944
100.0000
84.1085
8203682000
ciseli-customINDELC1_5map_l250_m1_e0*
0.0000
0.0000
99.6656
00010
0.0000
ciseli-customINDELC1_5map_l250_m1_e0het
0.0000
100.0000
00000
ciseli-customINDELC1_5map_l250_m1_e0hetalt
0.0000
0.0000
0.0000
00000
ciseli-customINDELC1_5map_l250_m1_e0homalt
0.0000
0.0000
99.3902
00010
0.0000
ciseli-customINDELC6_15map_l250_m1_e0*
0.0000
100.0000
00000
ciseli-customINDELC6_15map_l250_m1_e0het
0.0000
100.0000
00000
ciseli-customINDELC6_15map_l250_m1_e0hetalt
0.0000
0.0000
0.0000
00000
ciseli-customINDELC6_15map_l250_m1_e0homalt
0.0000
100.0000
00000
ciseli-customINDELD16_PLUSmap_l250_m1_e0*
33.3333
25.0000
50.0000
98.3740
13111
100.0000
ciseli-customINDELD16_PLUSmap_l250_m1_e0het
50.0000
33.3333
100.0000
98.4848
12100
ciseli-customINDELD16_PLUSmap_l250_m1_e0hetalt
0.0000
0.0000
0.0000
01000
ciseli-customINDELD16_PLUSmap_l250_m1_e0homalt
0.0000
0.0000
98.2456
00011
100.0000
ciseli-customINDELD1_5map_l250_m1_e0*
66.7446
61.4035
73.1034
97.1877
105661063912
30.7692
ciseli-customINDELD1_5map_l250_m1_e0het
62.5799
57.6577
68.4211
97.6398
644765306
20.0000
ciseli-customINDELD1_5map_l250_m1_e0hetalt
0.0000
0.0000
0.0000
03000
ciseli-customINDELD1_5map_l250_m1_e0homalt
76.6355
71.9298
82.0000
95.5791
41164196
66.6667
ckim-dragenINDELI6_15map_l250_m1_e0*
92.3077
85.7143
100.0000
97.9310
61600
ckim-dragenINDELI6_15map_l250_m1_e0het
85.7143
75.0000
100.0000
98.4127
31300
ckim-dragenINDELI6_15map_l250_m1_e0hetalt
0.0000
100.0000
00000
ckim-dragenINDELI6_15map_l250_m1_e0homalt
100.0000
100.0000
100.0000
96.2500
30300
ckim-dragenSNPtimap_l250_m1_e0*
97.2516
97.7288
96.7791
88.9718
4475104447714918
12.0805
ckim-dragenSNPtimap_l250_m1_e0het
96.2459
97.1361
95.3719
90.8281
288385288514010
7.1429
ckim-dragenSNPtimap_l250_m1_e0hetalt
100.0000
100.0000
100.0000
91.4894
40400
ckim-dragenSNPtimap_l250_m1_e0homalt
99.1261
98.8177
99.4364
82.0944
158819158898
88.8889
ckim-dragenSNPtvmap_l250_m1_e0*
97.1159
97.3177
96.9150
89.2026
25767125768211
13.4146
ckim-dragenSNPtvmap_l250_m1_e0het
96.1474
96.3626
95.9331
90.7498
1722651722734
5.4795
ckim-dragenSNPtvmap_l250_m1_e0hetalt
100.0000
100.0000
100.0000
94.2857
40400
ckim-dragenSNPtvmap_l250_m1_e0homalt
99.1254
99.2991
98.9523
83.2944
850685097
77.7778
ckim-dragenSNP*map_l250_m1_e0*
97.2004
97.5768
96.8269
89.0554
7047175704923129
12.5541
ckim-dragenSNP*map_l250_m1_e0het
96.2090
96.8454
95.5809
90.7991
4605150460721314
6.5728
ckim-dragenSNP*map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
94.2857
40400
ckim-dragenSNP*map_l250_m1_e0homalt
99.1258
98.9850
99.2671
82.5332
24382524381815
83.3333
ckim-gatkINDEL*map_l250_m1_e0*
91.9255
97.0492
87.3156
97.0758
2969296434
9.3023
ckim-gatkINDEL*map_l250_m1_e0het
88.9423
97.3684
81.8584
97.5127
1855185412
4.8781
ckim-gatkINDEL*map_l250_m1_e0hetalt
80.0000
66.6667
100.0000
98.1308
42400
ckim-gatkINDEL*map_l250_m1_e0homalt
98.1651
98.1651
98.1651
95.2464
107210722
100.0000
ckim-gatkINDELC16_PLUSmap_l250_m1_e0*
0.0000
0.0000
0.0000
00000
ckim-gatkINDELC16_PLUSmap_l250_m1_e0het
0.0000
0.0000
0.0000
00000
ckim-gatkINDELC16_PLUSmap_l250_m1_e0hetalt
0.0000
0.0000
0.0000
00000
ckim-gatkINDELC16_PLUSmap_l250_m1_e0homalt
0.0000
0.0000
0.0000
00000