PrecisionFDA
Truth Challenge
Engage and improve DNA test results with our community challenges
Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
| Entry | Type | Subtype | Subset | Genotype | F-score | Recall | Precision | Frac_NA | Truth TP | Truth FN | Query TP | Query FP | FP gt | % FP ma | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
951-1000 / 86044 show all | |||||||||||||||
| gduggal-bwavard | INDEL | I6_15 | tech_badpromoters | het | 77.7778 | 100.0000 | 63.6364 | 62.0690 | 7 | 0 | 7 | 4 | 4 | 100.0000 | |
| gduggal-bwavard | INDEL | I6_15 | tech_badpromoters | * | 64.0000 | 61.5385 | 66.6667 | 62.5000 | 8 | 5 | 8 | 4 | 4 | 100.0000 | |
| gduggal-bwavard | INDEL | I1_5 | tech_badpromoters | homalt | 81.8182 | 69.2308 | 100.0000 | 43.7500 | 9 | 4 | 9 | 0 | 0 | ||
| gduggal-bwavard | INDEL | I1_5 | tech_badpromoters | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 1 | 0 | 0 | 0 | |||
| gduggal-bwavard | INDEL | I1_5 | tech_badpromoters | het | 88.8889 | 100.0000 | 80.0000 | 60.0000 | 8 | 0 | 8 | 2 | 2 | 100.0000 | |
| gduggal-bwavard | INDEL | I1_5 | tech_badpromoters | * | 82.9268 | 77.2727 | 89.4737 | 53.6585 | 17 | 5 | 17 | 2 | 2 | 100.0000 | |
| gduggal-bwavard | INDEL | I16_PLUS | tech_badpromoters | homalt | 66.6667 | 50.0000 | 100.0000 | 50.0000 | 1 | 1 | 1 | 0 | 0 | ||
| gduggal-bwavard | INDEL | I16_PLUS | tech_badpromoters | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| gduggal-bwavard | INDEL | I16_PLUS | tech_badpromoters | het | 80.0000 | 100.0000 | 66.6667 | 78.5714 | 2 | 0 | 2 | 1 | 1 | 100.0000 | |
| gduggal-bwavard | INDEL | I16_PLUS | tech_badpromoters | * | 75.0000 | 75.0000 | 75.0000 | 75.0000 | 3 | 1 | 3 | 1 | 1 | 100.0000 | |
| gduggal-bwavard | INDEL | D6_15 | tech_badpromoters | homalt | 80.0000 | 66.6667 | 100.0000 | 63.6364 | 4 | 2 | 4 | 0 | 0 | ||
| gduggal-bwavard | INDEL | D6_15 | tech_badpromoters | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 1 | 0 | 0 | 0 | |||
| gduggal-bwavard | INDEL | D6_15 | tech_badpromoters | het | 90.9091 | 100.0000 | 83.3333 | 55.5556 | 10 | 0 | 10 | 2 | 2 | 100.0000 | |
| gduggal-bwavard | INDEL | D6_15 | tech_badpromoters | * | 84.8485 | 82.3529 | 87.5000 | 57.8947 | 14 | 3 | 14 | 2 | 2 | 100.0000 | |
| gduggal-bwavard | INDEL | D1_5 | tech_badpromoters | homalt | 71.4286 | 55.5556 | 100.0000 | 40.0000 | 5 | 4 | 3 | 0 | 0 | ||
| gduggal-bwavard | INDEL | D1_5 | tech_badpromoters | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 2 | 0 | 0 | 0 | |||
| gduggal-bwavard | INDEL | D1_5 | tech_badpromoters | het | 69.5652 | 100.0000 | 53.3333 | 51.6129 | 8 | 0 | 8 | 7 | 6 | 85.7143 | |
| gduggal-bwavard | INDEL | D1_5 | tech_badpromoters | * | 64.5598 | 68.4211 | 61.1111 | 50.0000 | 13 | 6 | 11 | 7 | 6 | 85.7143 | |
| gduggal-bwavard | INDEL | D16_PLUS | tech_badpromoters | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| gduggal-bwavard | INDEL | D16_PLUS | tech_badpromoters | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| gduggal-bwavard | INDEL | D16_PLUS | tech_badpromoters | het | 85.7143 | 75.0000 | 100.0000 | 25.0000 | 3 | 1 | 3 | 0 | 0 | ||
| gduggal-bwavard | INDEL | D16_PLUS | tech_badpromoters | * | 85.7143 | 75.0000 | 100.0000 | 50.0000 | 3 | 1 | 3 | 0 | 0 | ||
| gduggal-bwavard | INDEL | C6_15 | tech_badpromoters | homalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| gduggal-bwavard | INDEL | C6_15 | tech_badpromoters | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| gduggal-bwavard | INDEL | C6_15 | tech_badpromoters | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| gduggal-bwavard | INDEL | C6_15 | tech_badpromoters | * | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| gduggal-bwavard | INDEL | C1_5 | tech_badpromoters | homalt | 0.0000 | 0.0000 | 100.0000 | 66.6667 | 0 | 0 | 1 | 0 | 0 | ||
| gduggal-bwavard | INDEL | C1_5 | tech_badpromoters | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| gduggal-bwavard | INDEL | C1_5 | tech_badpromoters | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| gduggal-bwavard | INDEL | C1_5 | tech_badpromoters | * | 0.0000 | 0.0000 | 100.0000 | 83.3333 | 0 | 0 | 1 | 0 | 0 | ||
| gduggal-bwavard | INDEL | C16_PLUS | tech_badpromoters | homalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| gduggal-bwavard | INDEL | C16_PLUS | tech_badpromoters | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| gduggal-bwavard | INDEL | C16_PLUS | tech_badpromoters | het | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| gduggal-bwavard | INDEL | C16_PLUS | tech_badpromoters | * | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| gduggal-bwavard | INDEL | * | tech_badpromoters | homalt | 75.4717 | 60.6061 | 100.0000 | 54.7619 | 20 | 13 | 19 | 0 | 0 | ||
| gduggal-bwavard | INDEL | * | tech_badpromoters | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 4 | 0 | 0 | 0 | |||
| gduggal-bwavard | INDEL | * | tech_badpromoters | het | 81.7204 | 97.4359 | 70.3704 | 60.0000 | 38 | 1 | 38 | 16 | 15 | 93.7500 | |
| gduggal-bwavard | INDEL | * | tech_badpromoters | * | 77.1889 | 76.3158 | 78.0822 | 58.7571 | 58 | 18 | 57 | 16 | 15 | 93.7500 | |
| gduggal-bwaplat | SNP | tv | tech_badpromoters | homalt | 90.1408 | 82.0513 | 100.0000 | 58.4416 | 32 | 7 | 32 | 0 | 0 | ||
| gduggal-bwaplat | SNP | tv | tech_badpromoters | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| gduggal-bwaplat | SNP | tv | tech_badpromoters | het | 93.5484 | 87.8788 | 100.0000 | 81.4103 | 29 | 4 | 29 | 0 | 0 | ||
| gduggal-bwaplat | SNP | tv | tech_badpromoters | * | 91.7293 | 84.7222 | 100.0000 | 73.8197 | 61 | 11 | 61 | 0 | 0 | ||
| gduggal-bwaplat | SNP | ti | tech_badpromoters | homalt | 94.8718 | 90.2439 | 100.0000 | 44.7761 | 37 | 4 | 37 | 0 | 0 | ||
| gduggal-bwaplat | SNP | ti | tech_badpromoters | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| gduggal-bwaplat | SNP | ti | tech_badpromoters | het | 92.8571 | 88.6364 | 97.5000 | 65.2174 | 39 | 5 | 39 | 1 | 0 | 0.0000 | |
| gduggal-bwaplat | SNP | ti | tech_badpromoters | * | 93.8272 | 89.4118 | 98.7013 | 57.6923 | 76 | 9 | 76 | 1 | 0 | 0.0000 | |
| gduggal-bwaplat | SNP | * | tech_badpromoters | homalt | 92.6174 | 86.2500 | 100.0000 | 52.0833 | 69 | 11 | 69 | 0 | 0 | ||
| gduggal-bwaplat | SNP | * | tech_badpromoters | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| gduggal-bwaplat | SNP | * | tech_badpromoters | het | 93.1507 | 88.3117 | 98.5507 | 74.5387 | 68 | 9 | 68 | 1 | 0 | 0.0000 | |
| gduggal-bwaplat | SNP | * | tech_badpromoters | * | 92.8814 | 87.2611 | 99.2754 | 66.7470 | 137 | 20 | 137 | 1 | 0 | 0.0000 | |