PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Challenge Closed
View Responses
Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Reset
EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
85401-85450 / 86044 show all
rpoplin-dv42SNP***
99.9587
99.9447
99.9728
19.0681
305293016893052766832433
52.0433
rpoplin-dv42SNP**het
99.9475
99.9278
99.9673
19.5765
187223413531872094613268
43.7194
rpoplin-dv42SNP**hetalt
99.4854
99.8852
99.0888
49.8858
870187088
100.0000
rpoplin-dv42INDELI16_PLUS**
94.2741
91.2655
97.4879
59.7696
58205575821150140
93.3333
rpoplin-dv42INDELI16_PLUS*het
94.8292
93.8926
95.7847
65.3540
25521662545112105
93.7500
rpoplin-dv42INDELI16_PLUS*hetalt
91.5838
84.7950
99.5541
49.0051
1779319178687
87.5000
rpoplin-dv42INDELI16_PLUS*homalt
96.6889
95.3876
98.0263
58.4131
14897214903028
93.3333
rpoplin-dv42SNP**homalt
99.9769
99.9716
99.9821
18.2100
11798263351179802211157
74.4076
rpoplin-dv42SNPti**
99.9621
99.9459
99.9782
17.6958
208438311282084320454276
60.7930
rpoplin-dv42SNPti*het
99.9511
99.9279
99.9742
18.1937
12809679241280907330164
49.6970
rpoplin-dv42SNPti*hetalt
99.4012
99.8282
98.9779
50.2542
581158166
100.0000
rpoplin-dv42SNPti*homalt
99.9800
99.9747
99.9853
16.8487
802835203802832118106
89.8305
rpoplin-dv42SNPtv**
99.9512
99.9420
99.9604
21.8980
969128562969027384163
42.4479
rpoplin-dv42SNPtv*het
99.9398
99.9275
99.9522
22.4174
591267429591187283104
36.7491
rpoplin-dv42SNPtv*hetalt
99.4854
99.8852
99.0888
49.8858
870187088
100.0000
rpoplin-dv42SNPtv*homalt
99.9702
99.9650
99.9753
20.9652
3769911323769709351
54.8387
ndellapenna-hhgaSNP***
99.8818
99.8118
99.9519
18.1821
3048871574830489191468467
31.8120
ndellapenna-hhgaSNP**het
99.8554
99.7670
99.9441
18.2036
1869221436618692411046128
12.2371
ndellapenna-hhgaSNP**hetalt
98.9643
98.7371
99.1926
47.1341
8601186077
100.0000
ndellapenna-hhgaSNP**homalt
99.9243
99.8838
99.9648
18.1151
117879013711178818415332
80.0000
ndellapenna-hhgaSNPti**
99.8903
99.8233
99.9574
16.8793
208182536862081847888298
33.5586
ndellapenna-hhgaSNPti*het
99.8668
99.7824
99.9512
16.9483
12791022789127910362483
13.3013
ndellapenna-hhgaSNPti*hetalt
98.7952
98.6254
98.9655
47.9354
574857466
100.0000
ndellapenna-hhgaSNPti*homalt
99.9286
99.8893
99.9678
16.7330
802149889802170258209
81.0078
ndellapenna-hhgaINDELI1_5**
99.2393
98.9360
99.5445
55.9242
1490611603149032682431
63.1965
ndellapenna-hhgaINDELI1_5*het
99.3796
99.2245
99.5353
57.8169
7842861378394366178
48.6339
ndellapenna-hhgaINDELI1_5*hetalt
97.0167
94.8280
99.3087
62.5367
10616579106307467
90.5405
ndellapenna-hhgaINDELI1_5*homalt
99.4589
99.3199
99.5983
51.5644
6001741160008242186
76.8595
ndellapenna-hhgaINDELD1_5**
96.9939
96.6915
97.2981
56.7713
141890485514195439423509
89.0157
ndellapenna-hhgaINDELD1_5*het
97.6637
99.1299
96.2402
54.0039
868127628733734123186
93.3763
ndellapenna-hhgaINDELD1_5*hetalt
77.7578
64.1093
98.7893
70.8854
6568367761207563
84.0000
ndellapenna-hhgaINDELD1_5*homalt
99.1101
99.1497
99.0705
58.8372
4851041648497455260
57.1429
ndellapenna-hhgaINDELD6_15**
86.5914
82.4889
91.1232
54.1208
2152345692170121141783
84.3425
ndellapenna-hhgaINDELD6_15*het
92.4134
97.5414
87.7976
56.6240
113072851205916761576
94.0334
ndellapenna-hhgaINDELD6_15*hetalt
65.7378
49.3394
98.4629
43.6387
4033414134595441
75.9259
ndellapenna-hhgaINDELD6_15*homalt
95.9125
97.7395
94.1526
53.1263
61831436183384166
43.2292
ndellapenna-hhgaINDELD16_PLUS**
85.7572
80.4393
91.8280
64.0820
545713275551494372
75.3036
ndellapenna-hhgaINDELD16_PLUS*het
92.2712
93.4473
91.1244
67.5886
29522073193311263
84.5659
ndellapenna-hhgaINDELD16_PLUS*hetalt
63.8503
47.1288
98.9624
49.3430
911102276385
62.5000
ndellapenna-hhgaINDELD16_PLUS*homalt
92.1150
94.2080
90.1130
60.6404
1594981595175104
59.4286
ndellapenna-hhgaINDELI6_15**
96.5902
95.4921
97.7138
48.4477
23704111923721555427
76.9369
ndellapenna-hhgaINDELI6_15*het
97.5570
97.2192
97.8973
54.2636
97542799777210127
60.4762
ndellapenna-hhgaINDELI6_15*hetalt
95.2209
91.6969
99.0267
38.6839
784171078347770
90.9091
ndellapenna-hhgaINDELI6_15*homalt
96.8456
97.9163
95.7981
48.3646
61091306110268230
85.8209
ndellapenna-hhgaINDELI16_PLUS**
92.8570
90.4814
95.3607
63.8712
57706075776281194
69.0391
ndellapenna-hhgaINDELI16_PLUS*het
94.4206
94.1869
94.6554
70.0188
2560158256814595
65.5172
ndellapenna-hhgaINDELI16_PLUS*hetalt
89.6769
82.4118
98.3466
51.6538
172936917252924
82.7586
ndellapenna-hhgaINDELI16_PLUS*homalt
94.0659
94.8751
93.2704
61.1057
148180148310775
70.0935
raldana-dualsentieonINDELC16_PLUS**
0.0000
0.0000
0.0000
00000
raldana-dualsentieonINDELC16_PLUS*het
0.0000
0.0000
0.0000
00000