PrecisionFDA
Truth Challenge
Engage and improve DNA test results with our community challenges
Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry | Type | Subtype | Subset | Genotype | F-score | Recall | Precision | Frac_NA | Truth TP | Truth FN | Query TP | Query FP | FP gt | % FP ma | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
83751-83800 / 86044 show all | |||||||||||||||
egarrison-hhga | INDEL | C1_5 | decoy | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
egarrison-hhga | INDEL | C1_5 | decoy | homalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
egarrison-hhga | INDEL | C6_15 | decoy | * | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
egarrison-hhga | INDEL | C6_15 | decoy | het | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
egarrison-hhga | INDEL | C6_15 | decoy | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
egarrison-hhga | INDEL | C6_15 | decoy | homalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
egarrison-hhga | INDEL | D16_PLUS | decoy | * | 90.9091 | 83.3333 | 100.0000 | 98.5836 | 5 | 1 | 5 | 0 | 0 | ||
egarrison-hhga | INDEL | D16_PLUS | decoy | het | 85.7143 | 75.0000 | 100.0000 | 98.7805 | 3 | 1 | 3 | 0 | 0 | ||
egarrison-hhga | INDEL | D16_PLUS | decoy | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
egarrison-hhga | INDEL | D16_PLUS | decoy | homalt | 100.0000 | 100.0000 | 100.0000 | 97.8261 | 2 | 0 | 2 | 0 | 0 | ||
egarrison-hhga | INDEL | C16_PLUS | decoy | * | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
egarrison-hhga | INDEL | C16_PLUS | decoy | het | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
egarrison-hhga | INDEL | C16_PLUS | decoy | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
egarrison-hhga | INDEL | C16_PLUS | decoy | homalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
egarrison-hhga | INDEL | D1_5 | decoy | * | 85.7143 | 75.0000 | 100.0000 | 99.9518 | 3 | 1 | 3 | 0 | 0 | ||
egarrison-hhga | INDEL | D1_5 | decoy | het | 100.0000 | 100.0000 | 100.0000 | 99.9511 | 2 | 0 | 2 | 0 | 0 | ||
egarrison-hhga | INDEL | D1_5 | decoy | hetalt | 0.0000 | 100.0000 | 0 | 1 | 0 | 0 | 0 | ||||
egarrison-hhga | INDEL | D1_5 | decoy | homalt | 100.0000 | 100.0000 | 100.0000 | 99.9464 | 1 | 0 | 1 | 0 | 0 | ||
egarrison-hhga | INDEL | D6_15 | decoy | * | 0.0000 | 100.0000 | 0 | 1 | 0 | 0 | 0 | ||||
egarrison-hhga | INDEL | D6_15 | decoy | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
egarrison-hhga | INDEL | D6_15 | decoy | hetalt | 0.0000 | 100.0000 | 0 | 1 | 0 | 0 | 0 | ||||
egarrison-hhga | INDEL | D6_15 | decoy | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
egarrison-hhga | INDEL | I16_PLUS | decoy | * | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
egarrison-hhga | INDEL | I16_PLUS | decoy | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
egarrison-hhga | INDEL | I16_PLUS | decoy | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
egarrison-hhga | INDEL | I16_PLUS | decoy | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
dgrover-gatk | INDEL | I1_5 | decoy | * | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
dgrover-gatk | INDEL | I1_5 | decoy | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
dgrover-gatk | INDEL | I1_5 | decoy | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
dgrover-gatk | INDEL | I1_5 | decoy | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
dgrover-gatk | INDEL | D1_5 | decoy | * | 100.0000 | 100.0000 | 100.0000 | 99.9393 | 4 | 0 | 4 | 0 | 0 | ||
dgrover-gatk | INDEL | D1_5 | decoy | het | 100.0000 | 100.0000 | 100.0000 | 99.9573 | 2 | 0 | 2 | 0 | 0 | ||
dgrover-gatk | INDEL | D1_5 | decoy | hetalt | 100.0000 | 100.0000 | 100.0000 | 99.6429 | 1 | 0 | 1 | 0 | 0 | ||
dgrover-gatk | INDEL | D1_5 | decoy | homalt | 100.0000 | 100.0000 | 100.0000 | 99.9383 | 1 | 0 | 1 | 0 | 0 | ||
dgrover-gatk | INDEL | D6_15 | decoy | * | 100.0000 | 100.0000 | 100.0000 | 99.9120 | 1 | 0 | 1 | 0 | 0 | ||
dgrover-gatk | INDEL | D6_15 | decoy | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
dgrover-gatk | INDEL | D6_15 | decoy | hetalt | 100.0000 | 100.0000 | 100.0000 | 99.1379 | 1 | 0 | 1 | 0 | 0 | ||
dgrover-gatk | INDEL | D6_15 | decoy | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
dgrover-gatk | INDEL | I16_PLUS | decoy | * | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
dgrover-gatk | INDEL | I16_PLUS | decoy | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
dgrover-gatk | INDEL | I16_PLUS | decoy | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
dgrover-gatk | INDEL | I16_PLUS | decoy | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
dgrover-gatk | SNP | ti | decoy | * | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
dgrover-gatk | SNP | ti | decoy | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
dgrover-gatk | SNP | ti | decoy | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
dgrover-gatk | SNP | ti | decoy | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
dgrover-gatk | SNP | tv | decoy | * | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
dgrover-gatk | SNP | tv | decoy | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
dgrover-gatk | SNP | tv | decoy | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
dgrover-gatk | SNP | tv | decoy | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 |