PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
82301-82350 / 86044 show all
astatham-gatkINDELI16_PLUSfunc_cds*
95.6522
91.6667
100.0000
74.4186
1111100
astatham-gatkINDELI16_PLUSfunc_cdshet
100.0000
100.0000
100.0000
65.3846
90900
astatham-gatkINDELI16_PLUSfunc_cdshetalt
0.0000
100.0000
01000
astatham-gatkINDELI16_PLUSfunc_cdshomalt
100.0000
100.0000
100.0000
86.6667
20200
astatham-gatkINDELC6_15func_cds*
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC6_15func_cdshet
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC6_15func_cdshetalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC6_15func_cdshomalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELD1_5func_cds*
100.0000
100.0000
100.0000
40.7407
159016000
astatham-gatkINDELD1_5func_cdshet
100.0000
100.0000
100.0000
46.5839
8508600
astatham-gatkINDELD1_5func_cdshetalt
0.0000
100.0000
00000
astatham-gatkINDELD1_5func_cdshomalt
100.0000
100.0000
100.0000
31.4815
7407400
astatham-gatkINDELD6_15func_cds*
100.0000
100.0000
100.0000
56.1224
4304300
astatham-gatkINDELD6_15func_cdshet
100.0000
100.0000
100.0000
53.2258
2902900
astatham-gatkINDELD6_15func_cdshetalt
100.0000
100.0000
100.0000
60.0000
20200
astatham-gatkINDELD6_15func_cdshomalt
100.0000
100.0000
100.0000
61.2903
1201200
asubramanian-gatkINDELI16_PLUSfunc_cds*
90.9091
83.3333
100.0000
78.2609
1021000
asubramanian-gatkINDELI16_PLUSfunc_cdshet
94.1176
88.8889
100.0000
70.3704
81800
asubramanian-gatkINDELI16_PLUSfunc_cdshetalt
0.0000
100.0000
01000
asubramanian-gatkINDELI16_PLUSfunc_cdshomalt
100.0000
100.0000
100.0000
88.2353
20200
asubramanian-gatkSNPtifunc_cds*
99.6805
99.5721
99.7892
27.6472
137285913726291
3.4483
asubramanian-gatkSNPtifunc_cdshet
99.6530
99.6472
99.6589
31.5760
8474308472291
3.4483
asubramanian-gatkSNPtifunc_cdshetalt
100.0000
100.0000
100.0000
52.9412
80800
asubramanian-gatkSNPtifunc_cdshomalt
99.7244
99.4502
100.0000
20.1522
524629524600
asubramanian-gatkSNPtvfunc_cds*
99.5422
99.4967
99.5877
36.6971
4349224348180
0.0000
asubramanian-gatkSNPtvfunc_cdshet
99.4171
99.5107
99.3236
42.1899
2644132643180
0.0000
asubramanian-gatkSNPtvfunc_cdshetalt
100.0000
100.0000
100.0000
58.3333
1001000
asubramanian-gatkSNPtvfunc_cdshomalt
99.7352
99.4718
100.0000
25.3304
16959169500
bgallagher-sentieonINDEL*func_cds*
99.5531
99.7753
99.3318
44.7724
444144631
33.3333
bgallagher-sentieonINDEL*func_cdshet
99.5392
100.0000
99.0826
49.7696
214021620
0.0000
bgallagher-sentieonINDEL*func_cdshetalt
88.8889
80.0000
100.0000
60.0000
41400
bgallagher-sentieonINDEL*func_cdshomalt
99.7792
100.0000
99.5595
38.4824
226022611
100.0000
asubramanian-gatkINDELI6_15func_cds*
93.9759
90.6977
97.5000
42.8571
3943911
100.0000
asubramanian-gatkINDELI6_15func_cdshet
95.6522
91.6667
100.0000
45.0000
2222200
asubramanian-gatkINDELI6_15func_cdshetalt
85.7143
75.0000
100.0000
40.0000
31300
asubramanian-gatkINDELI6_15func_cdshomalt
93.3333
93.3333
93.3333
40.0000
1411411
100.0000
asubramanian-gatkSNP*func_cds*
99.6470
99.5537
99.7405
30.0602
180698118066471
2.1277
asubramanian-gatkSNP*func_cdshet
99.5968
99.6147
99.5789
34.4684
111184311115471
2.1277
asubramanian-gatkSNP*func_cdshetalt
100.0000
100.0000
100.0000
58.3333
1001000
asubramanian-gatkSNP*func_cdshomalt
99.7270
99.4555
100.0000
21.4908
694138694100
asubramanian-gatkINDELD6_15func_cds*
98.8235
97.6744
100.0000
56.7010
4214200
asubramanian-gatkINDELD6_15func_cdshet
98.2456
96.5517
100.0000
54.0984
2812800
asubramanian-gatkINDELD6_15func_cdshetalt
100.0000
100.0000
100.0000
60.0000
20200
asubramanian-gatkINDELD6_15func_cdshomalt
100.0000
100.0000
100.0000
61.2903
1201200
asubramanian-gatkINDELI1_5func_cds*
99.1720
99.4444
98.9011
44.5122
179118020
0.0000
asubramanian-gatkINDELI1_5func_cdshet
98.3607
100.0000
96.7742
59.4771
5906020
0.0000
asubramanian-gatkINDELI1_5func_cdshetalt
100.0000
100.0000
100.0000
33.3333
20200
asubramanian-gatkINDELI1_5func_cdshomalt
99.5781
99.1597
100.0000
31.3953
118111800
bgallagher-sentieonINDELC1_5func_cds*
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDELC1_5func_cdshet
0.0000
0.0000
0.0000
00000