PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
81801-81850 / 86044 show all
hfeng-pmm2INDELC16_PLUSfunc_cds*
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELC16_PLUSfunc_cdshet
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELC16_PLUSfunc_cdshetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELC16_PLUSfunc_cdshomalt
0.0000
0.0000
0.0000
00000
hfeng-pmm1SNP*func_cds*
99.9366
99.9614
99.9119
23.2953
18143718140160
0.0000
hfeng-pmm1SNP*func_cdshet
99.9015
99.9462
99.8567
23.9755
11155611152160
0.0000
hfeng-pmm1SNP*func_cdshetalt
100.0000
100.0000
100.0000
62.9630
1001000
hfeng-pmm1SNP*func_cdshomalt
99.9928
99.9857
100.0000
22.0596
69781697800
hfeng-pmm1SNPtifunc_cds*
99.9384
99.9637
99.9130
21.7209
13782513780120
0.0000
hfeng-pmm1SNPtifunc_cdshet
99.9060
99.9530
99.8590
22.2902
850048498120
0.0000
hfeng-pmm1SNPtifunc_cdshetalt
100.0000
100.0000
100.0000
52.9412
80800
hfeng-pmm1SNPtifunc_cdshomalt
99.9905
99.9810
100.0000
20.7037
52741527400
gduggal-snapvardINDELD16_PLUSfunc_cds*
14.2857
8.3333
50.0000
77.7778
111110
0.0000
gduggal-snapvardINDELD16_PLUSfunc_cdshet
20.0000
12.5000
50.0000
77.7778
17110
0.0000
gduggal-snapvardINDELD16_PLUSfunc_cdshetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELD16_PLUSfunc_cdshomalt
0.0000
0.0000
0.0000
04000
gduggal-snapvardINDELD1_5func_cds*
87.5742
91.8239
83.7004
42.8212
146131903733
89.1892
gduggal-snapvardINDELD1_5func_cdshet
87.2852
100.0000
77.4390
47.4359
8501273733
89.1892
gduggal-snapvardINDELD1_5func_cdshetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELD1_5func_cdshomalt
90.3704
82.4324
100.0000
25.8824
61136300
gduggal-snapvardINDELI1_5func_cds*
92.6851
92.7778
92.5926
34.6021
167131751411
78.5714
gduggal-snapvardINDELI1_5func_cdshet
88.3685
94.9153
82.6667
49.3243
563621310
76.9231
gduggal-snapvardINDELI1_5func_cdshetalt
0.0000
0.0000
0.0000
02000
gduggal-snapvardINDELI1_5func_cdshomalt
96.1113
93.2773
99.1228
19.1489
111811311
100.0000
gduggal-snapvardINDELC6_15func_cds*
0.0000
0.0000
100.0000
75.0000
00100
gduggal-snapvardINDELC6_15func_cdshet
0.0000
100.0000
00000
gduggal-snapvardINDELC6_15func_cdshetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELC6_15func_cdshomalt
0.0000
0.0000
100.0000
0.0000
00100
gduggal-snapvardINDELI16_PLUSfunc_cds*
0.0000
0.0000
60.0000
61.5385
012322
100.0000
gduggal-snapvardINDELI16_PLUSfunc_cdshet
0.0000
0.0000
60.0000
58.3333
09322
100.0000
gduggal-snapvardINDELI16_PLUSfunc_cdshetalt
0.0000
0.0000
0.0000
01000
gduggal-snapvardINDELI16_PLUSfunc_cdshomalt
0.0000
100.0000
02000
gduggal-snapvardINDELC1_5func_cds*
0.0000
0.0000
33.3333
85.7143
00360
0.0000
gduggal-snapvardINDELC1_5func_cdshet
0.0000
0.0000
14.2857
86.7925
00160
0.0000
gduggal-snapvardINDELC1_5func_cdshetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELC1_5func_cdshomalt
0.0000
0.0000
100.0000
80.0000
00200
gduggal-snapvardINDELI6_15func_cds*
62.1299
60.4651
63.8889
40.0000
2617231312
92.3077
gduggal-snapvardINDELI6_15func_cdshet
69.8061
87.5000
58.0645
43.6364
213181312
92.3077
gduggal-snapvardINDELI6_15func_cdshetalt
0.0000
0.0000
0.0000
04000
gduggal-snapvardINDELI6_15func_cdshomalt
50.0000
33.3333
100.0000
0.0000
510500
gduggal-snapvardINDELD6_15func_cds*
67.7933
60.4651
77.1429
50.7042
26172787
87.5000
gduggal-snapvardINDELD6_15func_cdshet
79.1035
82.7586
75.7576
50.7463
2452587
87.5000
gduggal-snapvardINDELD6_15func_cdshetalt
0.0000
0.0000
0.0000
02000
gduggal-snapvardINDELD6_15func_cdshomalt
28.5714
16.6667
100.0000
50.0000
210200
jli-customINDELI1_5func_cds*
100.0000
100.0000
100.0000
32.8358
180018000
jli-customINDELI1_5func_cdshet
100.0000
100.0000
100.0000
39.1753
5905900
jli-customINDELI1_5func_cdshetalt
100.0000
100.0000
100.0000
0.0000
20200
jli-customINDELI1_5func_cdshomalt
100.0000
100.0000
100.0000
29.5858
119011900
jli-customINDELI6_15func_cds*
96.4706
95.3488
97.6190
38.2353
4124111
100.0000
jli-customINDELI6_15func_cdshet
97.8723
95.8333
100.0000
39.4737
2312300