PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
81651-81700 / 86044 show all
ghariani-varprowlINDELD16_PLUSfunc_cdshetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELD16_PLUSfunc_cdshomalt
85.7143
75.0000
100.0000
66.6667
31300
ghariani-varprowlINDELC16_PLUSfunc_cds*
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC16_PLUSfunc_cdshet
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC16_PLUSfunc_cdshetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC16_PLUSfunc_cdshomalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardSNP*func_cds*
99.3360
99.0138
99.6603
29.3432
17971179178956123
37.7049
gduggal-snapvardSNP*func_cdshet
99.2494
99.0323
99.4675
33.3113
11053108110205921
35.5932
gduggal-snapvardSNP*func_cdshetalt
0.0000
0.0000
0.0000
010000
gduggal-snapvardSNP*func_cdshomalt
99.5466
99.1259
99.9709
21.8523
691861687522
100.0000
gduggal-snapplatINDELI16_PLUSfunc_cds*
0.0000
0.0000
0.0000
012000
gduggal-snapplatINDELI16_PLUSfunc_cdshet
0.0000
0.0000
0.0000
09000
gduggal-snapplatINDELI16_PLUSfunc_cdshetalt
0.0000
0.0000
0.0000
01000
gduggal-snapplatINDELI16_PLUSfunc_cdshomalt
0.0000
0.0000
0.0000
02000
gduggal-snapplatINDELI1_5func_cds*
72.3894
69.4444
75.5952
55.4377
12555127411
2.4390
gduggal-snapplatINDELI1_5func_cdshet
52.4590
54.2373
50.7937
72.0000
322732310
0.0000
gduggal-snapplatINDELI1_5func_cdshetalt
0.0000
100.0000
02000
gduggal-snapplatINDELI1_5func_cdshomalt
83.8633
78.1513
90.4762
30.4636
932695101
10.0000
gduggal-snapplatSNPtifunc_cds*
99.5243
99.4052
99.6437
28.8978
137058213705495
10.2041
gduggal-snapplatSNPtifunc_cdshet
99.3942
99.3532
99.4351
33.3621
8449558449484
8.3333
gduggal-snapplatSNPtifunc_cdshetalt
93.3333
87.5000
100.0000
46.1538
71700
gduggal-snapplatSNPtifunc_cdshomalt
99.7435
99.5071
99.9810
20.2128
524926524911
100.0000
gduggal-snapplatINDELI6_15func_cds*
29.0909
18.6047
66.6667
47.8261
835840
0.0000
gduggal-snapplatINDELI6_15func_cdshet
25.0000
16.6667
50.0000
50.0000
420440
0.0000
gduggal-snapplatINDELI6_15func_cdshetalt
40.0000
25.0000
100.0000
0.0000
13100
gduggal-snapplatINDELI6_15func_cdshomalt
33.3333
20.0000
100.0000
50.0000
312300
gduggal-snapplatSNPtvfunc_cds*
99.2890
99.0391
99.5401
39.3276
4329424329200
0.0000
gduggal-snapplatSNPtvfunc_cdshet
99.1144
98.9838
99.2453
45.4845
2630272630200
0.0000
gduggal-snapplatSNPtvfunc_cdshetalt
94.7368
90.0000
100.0000
47.0588
91900
gduggal-snapplatSNPtvfunc_cdshomalt
99.5875
99.1784
100.0000
26.2009
169014169000
gduggal-snapvardINDEL*func_cds*
83.0794
82.2472
83.9286
43.6242
366794238165
80.2469
gduggal-snapvardINDEL*func_cdshet
80.5822
87.3832
74.7634
51.0046
187272378064
80.0000
gduggal-snapvardINDEL*func_cdshetalt
0.0000
0.0000
0.0000
05000
gduggal-snapvardINDEL*func_cdshomalt
88.1855
79.2035
99.4652
24.2915
1794718611
100.0000
gduggal-snapvardINDELC16_PLUSfunc_cds*
0.0000
100.0000
00000
gduggal-snapvardINDELC16_PLUSfunc_cdshet
0.0000
100.0000
00000
gduggal-snapvardINDELC16_PLUSfunc_cdshetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELC16_PLUSfunc_cdshomalt
0.0000
0.0000
0.0000
00000
gduggal-snapplatSNP*func_cds*
99.4703
99.3223
99.6187
31.7106
1802712318027695
7.2464
gduggal-snapplatSNP*func_cdshet
99.3276
99.2653
99.3900
36.7079
110798211079684
5.8824
gduggal-snapplatSNP*func_cdshetalt
94.7368
90.0000
100.0000
47.0588
91900
gduggal-snapplatSNP*func_cdshomalt
99.7054
99.4269
99.9856
21.7587
693940693911
100.0000
gduggal-snapplatINDELC1_5func_cds*
0.0000
0.0000
0.0000
00000
gduggal-snapplatINDELC1_5func_cdshet
0.0000
0.0000
0.0000
00000
gduggal-snapplatINDELC1_5func_cdshetalt
0.0000
0.0000
0.0000
00000
gduggal-snapplatINDELC1_5func_cdshomalt
0.0000
0.0000
0.0000
00000
gduggal-snapplatINDELD1_5func_cds*
86.3919
81.7610
91.5789
51.7766
13029174160
0.0000
gduggal-snapplatINDELD1_5func_cdshet
81.7516
78.8235
84.9057
60.5948
671890160
0.0000
gduggal-snapplatINDELD1_5func_cdshetalt
0.0000
100.0000
00000
gduggal-snapplatINDELD1_5func_cdshomalt
91.9708
85.1351
100.0000
31.1475
63118400