PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
81601-81650 / 86044 show all
ndellapenna-hhgaINDELC1_5func_cds*
0.0000
100.0000
00000
ndellapenna-hhgaINDELC1_5func_cdshet
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaINDELC1_5func_cdshetalt
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaINDELC1_5func_cdshomalt
0.0000
100.0000
00000
mlin-fermikitINDELI6_15func_cds*
96.4706
95.3488
97.6190
37.3134
4124111
100.0000
mlin-fermikitINDELI6_15func_cdshet
97.9592
100.0000
96.0000
37.5000
2402411
100.0000
mlin-fermikitINDELI6_15func_cdshetalt
66.6667
50.0000
100.0000
0.0000
22200
mlin-fermikitINDELI6_15func_cdshomalt
100.0000
100.0000
100.0000
40.0000
1501500
ndellapenna-hhgaINDELC6_15func_cds*
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaINDELC6_15func_cdshet
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaINDELC6_15func_cdshetalt
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaINDELC6_15func_cdshomalt
0.0000
0.0000
0.0000
00000
mlin-fermikitSNPtvfunc_cds*
99.2667
99.1078
99.4262
22.7208
43323943322514
56.0000
mlin-fermikitSNPtvfunc_cdshet
99.1679
98.6827
99.6579
21.9982
262235262290
0.0000
mlin-fermikitSNPtvfunc_cdshetalt
100.0000
100.0000
100.0000
37.5000
1001000
mlin-fermikitSNPtvfunc_cdshomalt
99.4152
99.7653
99.0676
23.6994
1700417001614
87.5000
ndellapenna-hhgaINDEL*func_cds*
99.5516
99.7753
99.3289
89.8846
444144430
0.0000
ndellapenna-hhgaINDEL*func_cdshet
99.3039
100.0000
98.6175
41.5094
214021430
0.0000
ndellapenna-hhgaINDEL*func_cdshetalt
88.8889
80.0000
100.0000
60.0000
41400
ndellapenna-hhgaINDEL*func_cdshomalt
100.0000
100.0000
100.0000
35.6125
226022600
ndellapenna-hhgaINDELC16_PLUSfunc_cds*
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaINDELC16_PLUSfunc_cdshet
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaINDELC16_PLUSfunc_cdshetalt
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaINDELC16_PLUSfunc_cdshomalt
0.0000
0.0000
0.0000
00000
mlin-fermikitSNPtifunc_cds*
99.5022
99.3109
99.6942
17.8687
1369295136924234
80.9524
mlin-fermikitSNPtifunc_cdshet
99.4565
98.9887
99.9288
17.2332
841886841860
0.0000
mlin-fermikitSNPtifunc_cdshetalt
100.0000
100.0000
100.0000
38.4615
80800
mlin-fermikitSNPtifunc_cdshomalt
99.5745
99.8294
99.3210
18.8179
5266952663634
94.4444
ghariani-varprowlINDEL*func_cds*
91.6388
92.3596
90.9292
61.0680
411344114130
73.1707
ghariani-varprowlINDEL*func_cdshet
90.6725
97.6636
84.6154
54.4280
20952093829
76.3158
ghariani-varprowlINDEL*func_cdshetalt
0.0000
0.0000
0.0000
05000
ghariani-varprowlINDEL*func_cdshomalt
93.7355
89.3805
98.5366
32.5658
2022420231
33.3333
gduggal-snapvardSNPtifunc_cds*
99.4321
99.1151
99.7511
27.3375
13665122136283414
41.1765
gduggal-snapvardSNPtifunc_cdshet
99.3512
99.0945
99.6092
31.0131
84277784113313
39.3939
gduggal-snapvardSNPtifunc_cdshetalt
0.0000
0.0000
0.0000
08000
gduggal-snapvardSNPtifunc_cdshomalt
99.6385
99.2986
99.9808
20.4816
523837521711
100.0000
gduggal-snapvardSNPtvfunc_cds*
98.8510
98.5129
99.1913
36.1464
43066542933510
28.5714
gduggal-snapvardSNPtvfunc_cdshet
98.7765
98.8333
98.7199
41.1608
2626312622349
26.4706
gduggal-snapvardSNPtvfunc_cdshetalt
0.0000
0.0000
0.0000
010000
gduggal-snapvardSNPtvfunc_cdshomalt
99.2613
98.5915
99.9402
26.1484
168024167111
100.0000
ghariani-varprowlINDELC1_5func_cds*
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC1_5func_cdshet
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC1_5func_cdshetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC1_5func_cdshomalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC6_15func_cds*
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC6_15func_cdshet
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC6_15func_cdshetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC6_15func_cdshomalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELD16_PLUSfunc_cds*
91.6667
91.6667
91.6667
75.5102
1111111
100.0000
ghariani-varprowlINDELD16_PLUSfunc_cdshet
94.1176
100.0000
88.8889
77.5000
80811
100.0000