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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1610 1611 1612 1613 1614 1615 1616 1617 1618 ... 1720 1721 » 80651-80700 / 86044 show all
jmaeng-gatk	SNP	*	HG002complexvar	hetalt	97.8723	96.4516	99.3355	40.5138	299	11	299	2	2	100.0000
jmaeng-gatk	SNP	*	HG002complexvar	homalt	99.3008	98.6263	99.9845	20.0307	284610	3964	284586	44	39	88.6364
jmaeng-gatk	SNP	ti	HG002complexvar	*	99.5813	99.1995	99.9661	17.9457	504366	4070	504306	171	77	45.0292
jmaeng-gatk	SNP	ti	HG002complexvar	het	99.7293	99.5044	99.9553	17.6005	313206	1560	313156	140	49	35.0000
jmaeng-gatk	SNP	ti	HG002complexvar	hetalt	97.2973	95.6522	99.0000	40.4762	198	9	198	2	2	100.0000
jmaeng-gatk	SNP	ti	HG002complexvar	homalt	99.3419	98.7072	99.9848	18.4737	190962	2501	190952	29	26	89.6552
jmaeng-gatk	SNP	tv	HG002complexvar	*	99.5035	99.0473	99.9639	22.5835	243807	2345	243715	88	31	35.2273
jmaeng-gatk	SNP	tv	HG002complexvar	het	99.6867	99.4221	99.9526	22.2557	149860	871	149782	71	16	22.5352
jmaeng-gatk	SNP	tv	HG002complexvar	hetalt	97.8723	96.4516	99.3355	40.5138	299	11	299	2	2	100.0000
jmaeng-gatk	SNP	tv	HG002complexvar	homalt	99.2171	98.4618	99.9840	23.0284	93648	1463	93634	15	13	86.6667
jmaeng-gatk	INDEL	I6_15	HG002complexvar	*	97.9019	96.8698	98.9563	57.2482	4642	150	4646	49	49	100.0000
jmaeng-gatk	INDEL	I6_15	HG002complexvar	het	99.1867	98.5563	99.8253	59.8421	2321	34	2285	4	4	100.0000
jmaeng-gatk	INDEL	I6_15	HG002complexvar	hetalt	95.0665	90.5969	100.0000	53.0086	1108	115	1148	0	0
jmaeng-gatk	INDEL	I6_15	HG002complexvar	homalt	98.1392	99.9176	96.4229	55.6886	1213	1	1213	45	45	100.0000
jmaeng-gatk	INDEL	D1_5	HG002complexvar	*	99.4486	99.1930	99.7055	58.6476	32451	264	32505	96	76	79.1667
jmaeng-gatk	INDEL	D1_5	HG002complexvar	het	99.6962	99.5666	99.8262	56.4161	20675	90	20679	36	18	50.0000
jmaeng-gatk	INDEL	D1_5	HG002complexvar	hetalt	92.2064	88.1657	96.6354	72.5869	1192	160	1235	43	43	100.0000
jmaeng-gatk	INDEL	D1_5	HG002complexvar	homalt	99.8538	99.8679	99.8397	60.1891	10584	14	10591	17	15	88.2353
jmaeng-gatk	INDEL	I16_PLUS	HG002complexvar	*	98.2253	97.2498	99.2206	67.1110	1273	36	1273	10	9	90.0000
jmaeng-gatk	INDEL	I16_PLUS	HG002complexvar	het	99.0895	98.1955	100.0000	64.9055	653	12	631	0	0
jmaeng-gatk	INDEL	I16_PLUS	HG002complexvar	hetalt	95.8690	92.8358	99.1071	67.4419	311	24	333	3	3	100.0000
jmaeng-gatk	INDEL	I16_PLUS	HG002complexvar	homalt	98.8800	100.0000	97.7848	70.4949	309	0	309	7	6	85.7143
jmaeng-gatk	INDEL	I1_5	HG002complexvar	*	99.3649	98.9270	99.8067	56.9963	33005	358	33051	64	46	71.8750
jmaeng-gatk	INDEL	I1_5	HG002complexvar	het	99.6695	99.5052	99.8344	58.2792	18099	90	18081	30	14	46.6667
jmaeng-gatk	INDEL	I1_5	HG002complexvar	hetalt	91.9469	85.2839	99.7392	69.0289	1472	254	1530	4	4	100.0000
jmaeng-gatk	INDEL	I1_5	HG002complexvar	homalt	99.8366	99.8959	99.7773	52.9712	13434	14	13440	30	28	93.3333
mlin-fermikit	INDEL	I16_PLUS	HG002complexvar	*	84.0504	79.8319	88.7395	68.1648	1045	264	1056	134	128	95.5224
mlin-fermikit	INDEL	I16_PLUS	HG002complexvar	het	86.1405	88.2707	84.1108	65.5276	587	78	577	109	105	96.3303
mlin-fermikit	INDEL	I16_PLUS	HG002complexvar	hetalt	71.7549	56.4179	98.5437	70.9450	189	146	203	3	2	66.6667
mlin-fermikit	INDEL	I16_PLUS	HG002complexvar	homalt	89.7501	87.0550	92.6174	71.3186	269	40	276	22	21	95.4545
mlin-fermikit	INDEL	I1_5	HG002complexvar	*	96.3771	95.3032	97.4754	51.5661	31796	1567	31622	819	800	97.6801
mlin-fermikit	INDEL	I1_5	HG002complexvar	het	96.6423	95.7777	97.5227	51.7717	17421	768	17282	439	429	97.7221
mlin-fermikit	INDEL	I1_5	HG002complexvar	hetalt	88.8775	80.8806	98.6292	68.2274	1396	330	1439	20	20	100.0000
mlin-fermikit	INDEL	I1_5	HG002complexvar	homalt	96.8973	96.5125	97.2853	48.2881	12979	469	12901	360	351	97.5000
mlin-fermikit	INDEL	D6_15	HG002complexvar	*	90.8139	89.4568	92.2128	58.0463	4743	559	4784	404	381	94.3069
mlin-fermikit	INDEL	D6_15	HG002complexvar	het	92.4085	90.4808	94.4202	55.5173	2823	297	2809	166	152	91.5663
mlin-fermikit	INDEL	D6_15	HG002complexvar	hetalt	87.9228	79.5656	98.2415	48.4281	806	207	838	15	15	100.0000
mlin-fermikit	INDEL	D6_15	HG002complexvar	homalt	89.0670	95.2951	83.6029	66.2028	1114	55	1137	223	214	95.9641
mlin-fermikit	INDEL	C16_PLUS	HG002complexvar	*		0.0000	0.0000	0.0000	0	0	0	0	0
mlin-fermikit	INDEL	C16_PLUS	HG002complexvar	het		0.0000	0.0000	0.0000	0	0	0	0	0
mlin-fermikit	INDEL	C16_PLUS	HG002complexvar	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
mlin-fermikit	INDEL	C16_PLUS	HG002complexvar	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
mlin-fermikit	INDEL	C6_15	HG002complexvar	*	0.0000	100.0000	0.0000	0.0000	4	0	0	0	0
mlin-fermikit	INDEL	C6_15	HG002complexvar	het	0.0000	100.0000	0.0000	0.0000	4	0	0	0	0
mlin-fermikit	INDEL	C6_15	HG002complexvar	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
mlin-fermikit	INDEL	C6_15	HG002complexvar	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
mlin-fermikit	INDEL	D16_PLUS	HG002complexvar	*	88.7656	86.9142	90.6977	68.5511	1428	215	1443	148	132	89.1892
mlin-fermikit	INDEL	D16_PLUS	HG002complexvar	het	90.4295	87.7145	93.3180	67.0463	971	136	810	58	45	77.5862
mlin-fermikit	INDEL	D16_PLUS	HG002complexvar	hetalt	85.1780	74.4939	99.4398	52.4000	184	63	355	2	2	100.0000
mlin-fermikit	INDEL	D16_PLUS	HG002complexvar	homalt	84.2050	94.4637	75.9563	78.1493	273	16	278	88	85	96.5909

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