PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
80601-80650 / 86044 show all
jpowers-varprowlINDELC6_15HG002complexvar*
0.0000
100.0000
0.0000
0.0000
40000
jpowers-varprowlINDELC6_15HG002complexvarhet
0.0000
100.0000
0.0000
0.0000
40000
jpowers-varprowlINDELC6_15HG002complexvarhetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELC6_15HG002complexvarhomalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDEL*HG002complexvar*
91.1605
89.9127
92.4435
54.5762
6917777616894956365349
94.9077
jpowers-varprowlINDEL*HG002complexvarhet
92.4718
94.5577
90.4760
57.5873
4369725154368045984462
97.0422
jpowers-varprowlINDEL*HG002complexvarhetalt
0.0000
2.7305
0.0000
0.0000
1013598000
jpowers-varprowlINDEL*HG002complexvarhomalt
94.9661
93.9024
96.0543
47.7714
253791648252691038887
85.4528
jpowers-varprowlINDELC1_5HG002complexvar*
0.0000
85.7143
0.0000
0.0000
61000
jpowers-varprowlINDELC1_5HG002complexvarhet
0.0000
85.7143
0.0000
0.0000
61000
jpowers-varprowlINDELC1_5HG002complexvarhetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELC1_5HG002complexvarhomalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlSNP*HG002complexvar*
99.4683
99.2937
99.6435
20.7160
749051532874940426811602
59.7538
jpowers-varprowlSNP*HG002complexvarhet
99.3948
98.9553
99.8382
20.0313
4606324863460862747150
20.0803
jpowers-varprowlSNP*HG002complexvarhetalt
0.0000
0.0000
0.0000
0310000
jpowers-varprowlSNP*HG002complexvarhomalt
99.6393
99.9463
99.3342
21.7803
28841915528854219341452
75.0776
jpowers-varprowlSNPtvHG002complexvar*
99.3235
99.1623
99.4852
24.4097
24409020622442851264803
63.5285
jpowers-varprowlSNPtvHG002complexvarhet
99.3313
98.8748
99.7919
23.6187
149035169614915531160
19.2926
jpowers-varprowlSNPtvHG002complexvarhetalt
0.0000
0.0000
0.0000
0310000
jpowers-varprowlSNPtvHG002complexvarhomalt
99.4724
99.9411
99.0081
25.6082
950555695130953743
77.9643
ltrigg-rtg1INDELC1_5HG002complexvar*
91.9971
85.7143
99.2739
88.1471
6195772
28.5714
ltrigg-rtg1INDELC1_5HG002complexvarhet
91.8033
85.7143
98.8235
86.8787
6142051
20.0000
ltrigg-rtg1INDELC1_5HG002complexvarhetalt
0.0000
0.0000
99.6183
86.5847
0026111
100.0000
ltrigg-rtg1INDELC1_5HG002complexvarhomalt
0.0000
0.0000
99.6390
90.5814
0027610
0.0000
jpowers-varprowlINDELI1_5HG002complexvar*
92.7158
90.8192
94.6934
52.3150
3030030633017516911600
94.6186
jpowers-varprowlINDELI1_5HG002complexvarhet
94.3417
95.4478
93.2609
57.7585
173618281734012531221
97.4461
jpowers-varprowlINDELI1_5HG002complexvarhetalt
0.0000
2.5492
0.0000
0.0000
441682000
jpowers-varprowlINDELI1_5HG002complexvarhomalt
96.2923
95.8879
96.7001
41.8106
1289555312835438379
86.5297
jpowers-varprowlINDELI6_15HG002complexvar*
68.3061
61.4775
76.8413
54.9585
294618462963893875
97.9843
jpowers-varprowlINDELI6_15HG002complexvarhet
76.9804
82.9299
71.8274
56.3262
19534021981777772
99.3565
jpowers-varprowlINDELI6_15HG002complexvarhetalt
0.0000
1.3083
0.0000
0.0000
161207000
jpowers-varprowlINDELI6_15HG002complexvarhomalt
84.7204
80.4778
89.4353
51.1131
977237982116103
88.7931
jpowers-varprowlSNPtiHG002complexvar*
99.5182
99.3169
99.7203
18.7923
50496134735051191417799
56.3867
jpowers-varprowlSNPtiHG002complexvarhet
99.4252
98.9938
99.8603
18.1914
311597316731170743690
20.6422
jpowers-varprowlSNPtiHG002complexvarhetalt
0.0000
0.0000
0.0000
0207000
jpowers-varprowlSNPtiHG002complexvarhomalt
99.7216
99.9488
99.4954
19.7390
19336499193412981709
72.2732
ltrigg-rtg1INDEL*HG002complexvar*
98.8636
98.1465
99.5912
55.0476
75511142675278309190
61.4887
ltrigg-rtg1INDEL*HG002complexvarhet
98.9136
98.2515
99.5847
53.0906
454048084460418679
42.4731
ltrigg-rtg1INDEL*HG002complexvarhetalt
94.3098
90.8354
98.0606
74.9985
336033940458079
98.7500
ltrigg-rtg1INDEL*HG002complexvarhomalt
99.4013
98.9677
99.8388
52.4987
26747279266294332
74.4186
ltrigg-rtg1INDELC16_PLUSHG002complexvar*
0.0000
0.0000
95.5224
89.8792
006433
100.0000
ltrigg-rtg1INDELC16_PLUSHG002complexvarhet
0.0000
0.0000
95.4545
90.4762
002111
100.0000
ltrigg-rtg1INDELC16_PLUSHG002complexvarhetalt
0.0000
0.0000
96.2963
87.6147
002611
100.0000
ltrigg-rtg1INDELC16_PLUSHG002complexvarhomalt
0.0000
0.0000
94.4444
91.5493
001711
100.0000
jmaeng-gatkINDELD6_15HG002complexvar*
97.9225
97.3595
98.4921
58.5358
516214051607974
93.6709
jmaeng-gatkINDELD6_15HG002complexvarhet
98.8845
98.7179
99.0517
59.4483
30804030292925
86.2069
jmaeng-gatkINDELD6_15HG002complexvarhetalt
93.2190
90.3258
96.3037
47.2880
915989643737
100.0000
jmaeng-gatkINDELD6_15HG002complexvarhomalt
99.3614
99.8289
98.8983
63.0673
1167211671312
92.3077
jmaeng-gatkSNP*HG002complexvar*
99.5566
99.1508
99.9656
19.5091
7479756406747823257106
41.2451
jmaeng-gatkSNP*HG002complexvarhet
99.7155
99.4778
99.9544
19.1665
463066243146293821165
30.8057