PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
80501-80550 / 86044 show all
jli-customINDELC6_15HG002complexvar*
0.0000
100.0000
0.0000
0.0000
40000
jli-customINDELC6_15HG002complexvarhet
0.0000
100.0000
0.0000
0.0000
40000
jli-customINDELC6_15HG002complexvarhetalt
0.0000
0.0000
0.0000
00000
jli-customINDELC6_15HG002complexvarhomalt
0.0000
0.0000
0.0000
00000
jli-customINDELD16_PLUSHG002complexvar*
96.9398
95.6786
98.2346
63.8971
15727115582821
75.0000
jli-customINDELD16_PLUSHG002complexvarhet
97.1408
95.7543
98.5680
65.7400
106047826126
50.0000
jli-customINDELD16_PLUSHG002complexvarhetalt
94.0295
91.0931
97.1616
45.1497
225224451313
100.0000
jli-customINDELD16_PLUSHG002complexvarhomalt
99.1364
99.3080
98.9655
73.9209
287228732
66.6667
jli-customINDELD1_5HG002complexvar*
99.5191
99.2725
99.7668
57.5505
32477238325187659
77.6316
jli-customINDELD1_5HG002complexvarhet
99.7322
99.5618
99.9033
54.7904
206749120667206
30.0000
jli-customINDELD1_5HG002complexvarhetalt
93.0817
89.7929
96.6206
73.4123
121413812584443
97.7273
jli-customINDELD1_5HG002complexvarhomalt
99.9010
99.9151
99.8868
59.4114
105899105931210
83.3333
jli-customINDELI1_5HG002complexvar*
99.4264
98.9689
99.8882
55.8919
33019344330523727
72.9730
jli-customINDELI1_5HG002complexvarhet
99.6665
99.4282
99.9059
56.5291
1808510418053179
52.9412
jli-customINDELI1_5HG002complexvarhetalt
92.7842
86.7323
99.7439
70.2420
1497229155844
100.0000
jli-customINDELI1_5HG002complexvarhomalt
99.8996
99.9182
99.8811
52.2818
1343711134411614
87.5000
mlin-fermikitINDEL*HG002complexvar*
95.4305
94.5346
96.3436
54.3245
7273342057235627462618
95.3387
mlin-fermikitINDEL*HG002complexvarhet
95.8810
94.8801
96.9032
52.4432
4384623664340113871299
93.6554
mlin-fermikitINDEL*HG002complexvarhetalt
86.4462
77.1560
98.2798
67.7484
285484530285352
98.1132
mlin-fermikitINDEL*HG002complexvarhomalt
95.7600
96.3222
95.2043
55.1307
260339942592713061267
97.0138
ltrigg-rtg2SNPtiHG002complexvar*
99.8779
99.7988
99.9570
17.4272
507413102350731621898
44.9541
ltrigg-rtg2SNPtiHG002complexvarhet
99.8501
99.7528
99.9475
16.9710
31398877831399216546
27.8788
ltrigg-rtg2SNPtiHG002complexvarhetalt
99.0419
99.5169
98.5714
37.5000
206120733
100.0000
ltrigg-rtg2SNPtiHG002complexvarhomalt
99.9240
99.8739
99.9741
18.1301
1932192441931175049
98.0000
ltrigg-rtg2INDELD6_15HG002complexvar*
97.7900
96.9257
98.6698
51.5393
513916349706750
74.6269
ltrigg-rtg2INDELD6_15HG002complexvarhet
98.5457
97.9487
99.1499
50.4465
3056642916258
32.0000
ltrigg-rtg2INDELD6_15HG002complexvarhetalt
94.0012
92.3001
95.7661
55.0113
935789504242
100.0000
ltrigg-rtg2INDELD6_15HG002complexvarhomalt
99.0937
98.2036
100.0000
51.0204
114821110400
ltrigg-rtg2INDELI6_15HG002complexvar*
98.0543
96.8698
99.2681
50.7658
464215043403218
56.2500
ltrigg-rtg2INDELI6_15HG002complexvarhet
98.2137
97.4098
99.0310
49.5355
2294612044209
45.0000
ltrigg-rtg2INDELI6_15HG002complexvarhetalt
96.8057
94.1946
99.5656
57.9927
115271114655
100.0000
ltrigg-rtg2INDELI6_15HG002complexvarhomalt
98.9542
98.5173
99.3950
43.5610
119618115074
57.1429
ltrigg-rtg2SNP*HG002complexvar*
99.8684
99.7896
99.9473
18.8678
7527971587752943397167
42.0655
ltrigg-rtg2SNP*HG002complexvarhet
99.8358
99.7414
99.9305
18.3888
464296120446451532394
29.1022
ltrigg-rtg2SNP*HG002complexvarhetalt
99.0410
99.6774
98.4127
37.6238
309131055
100.0000
ltrigg-rtg2SNP*HG002complexvarhomalt
99.9218
99.8676
99.9761
19.6026
2881923822881186968
98.5507
ltrigg-rtg2INDELI16_PLUSHG002complexvar*
92.2852
87.0130
98.2375
52.4691
113917010591916
84.2105
ltrigg-rtg2INDELI16_PLUSHG002complexvarhet
91.9911
86.1654
98.6616
46.5235
5739251674
57.1429
ltrigg-rtg2INDELI16_PLUSHG002complexvarhetalt
89.8660
82.0896
99.2701
60.2899
2756027222
100.0000
ltrigg-rtg2INDELI16_PLUSHG002complexvarhomalt
95.2945
94.1748
96.4413
53.1667
291182711010
100.0000
ltrigg-rtg2INDELI1_5HG002complexvar*
99.3818
99.0798
99.6856
52.9504
330553073234210266
64.7059
ltrigg-rtg2INDELI1_5HG002complexvarhet
99.3853
99.2028
99.5685
52.2881
18044145173057544
58.6667
ltrigg-rtg2INDELI1_5HG002complexvarhetalt
98.0883
96.9293
99.2754
77.2008
16735319181414
100.0000
ltrigg-rtg2INDELI1_5HG002complexvarhomalt
99.5439
99.1894
99.9010
45.4107
1333810913119138
61.5385
ltrigg-rtg2SNPtvHG002complexvar*
99.8482
99.7705
99.9260
21.7021
24559056524583418272
39.5604
ltrigg-rtg2SNPtvHG002complexvarhet
99.8062
99.7174
99.8951
21.1944
15030842615052315848
30.3797
ltrigg-rtg2SNPtvHG002complexvarhetalt
99.0410
99.6774
98.4127
37.6238
309131055
100.0000
ltrigg-rtg2SNPtvHG002complexvarhomalt
99.9174
99.8549
99.9800
22.4289
94973138950011919
100.0000
ltrigg-rtg2INDELC1_5HG002complexvarhet
91.6047
85.7143
98.3645
86.9869
6142172
28.5714
ltrigg-rtg2INDELC1_5HG002complexvarhetalt
0.0000
0.0000
99.6350
86.5818
0027311
100.0000