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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1606 1607 1608 1609 1610 1611 1612 1613 1614 ... 1720 1721 » 80451-80500 / 86044 show all
hfeng-pmm2	SNP	tv	HG002complexvar	hetalt	99.6764	99.3548	100.0000	39.9610	308	2	308	0	0
hfeng-pmm2	SNP	tv	HG002complexvar	homalt	99.9732	99.9664	99.9800	23.0303	95079	32	95074	19	13	68.4211
jlack-gatk	INDEL	C16_PLUS	HG002complexvar	*		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	C16_PLUS	HG002complexvar	het		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	C16_PLUS	HG002complexvar	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	C16_PLUS	HG002complexvar	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	D16_PLUS	HG002complexvar	*	96.5938	96.2264	96.9641	66.5839	1581	62	1565	49	36	73.4694
jlack-gatk	INDEL	D16_PLUS	HG002complexvar	het	97.0657	97.5610	96.5753	68.6359	1080	27	846	30	18	60.0000
jlack-gatk	INDEL	D16_PLUS	HG002complexvar	hetalt	92.3729	88.2591	96.8889	46.8085	218	29	436	14	14	100.0000
jlack-gatk	INDEL	D16_PLUS	HG002complexvar	homalt	98.0936	97.9239	98.2639	75.8186	283	6	283	5	4	80.0000
jlack-gatk	INDEL	D1_5	HG002complexvar	*	99.4067	99.2878	99.5259	58.0276	32482	233	32539	155	92	59.3548
jlack-gatk	INDEL	D1_5	HG002complexvar	het	99.5570	99.5377	99.5763	55.9428	20669	96	20681	88	29	32.9545
jlack-gatk	INDEL	D1_5	HG002complexvar	hetalt	93.7719	91.1243	96.5779	72.4607	1232	120	1270	45	42	93.3333
jlack-gatk	INDEL	D1_5	HG002complexvar	homalt	99.8161	99.8396	99.7926	59.1577	10581	17	10588	22	21	95.4545
jlack-gatk	INDEL	D6_15	HG002complexvar	*	97.2520	96.7937	97.7147	58.0825	5132	170	5131	120	96	80.0000
jlack-gatk	INDEL	D6_15	HG002complexvar	het	98.1096	98.1090	98.1101	59.2917	3061	59	3011	58	40	68.9655
jlack-gatk	INDEL	D6_15	HG002complexvar	hetalt	92.4487	89.3386	95.7831	48.0438	905	108	954	42	37	88.0952
jlack-gatk	INDEL	D6_15	HG002complexvar	homalt	99.0234	99.7434	98.3137	61.3807	1166	3	1166	20	19	95.0000
jlack-gatk	INDEL	C6_15	HG002complexvar	*	0.0000	100.0000	0.0000	0.0000	4	0	0	0	0
jlack-gatk	INDEL	C6_15	HG002complexvar	het	0.0000	100.0000	0.0000	0.0000	4	0	0	0	0
jlack-gatk	INDEL	C6_15	HG002complexvar	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	C6_15	HG002complexvar	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
hfeng-pmm3	SNP	tv	HG002complexvar	*	99.8576	99.7315	99.9841	21.7544	245491	661	245404	39	15	38.4615
hfeng-pmm3	SNP	tv	HG002complexvar	het	99.7826	99.5854	99.9807	20.9857	150106	625	150027	29	6	20.6897
hfeng-pmm3	SNP	tv	HG002complexvar	hetalt	99.6764	99.3548	100.0000	37.5254	308	2	308	0	0
hfeng-pmm3	SNP	tv	HG002complexvar	homalt	99.9769	99.9643	99.9895	22.8756	95077	34	95069	10	9	90.0000
jlack-gatk	INDEL	*	HG002complexvar	*	99.2231	99.0863	99.3603	58.0205	76235	703	76113	490	357	72.8571
jlack-gatk	INDEL	*	HG002complexvar	het	99.3807	99.2967	99.4647	57.6016	45887	325	45527	245	124	50.6122
jlack-gatk	INDEL	*	HG002complexvar	hetalt	94.5505	91.1868	98.1719	68.2876	3373	326	3598	67	62	92.5373
jlack-gatk	INDEL	*	HG002complexvar	homalt	99.5756	99.8076	99.3448	56.8540	26975	52	26988	178	171	96.0674
jlack-gatk	INDEL	C1_5	HG002complexvar	*	0.0000	85.7143	0.0000	0.0000	6	1	0	0	0
jlack-gatk	INDEL	C1_5	HG002complexvar	het	0.0000	85.7143	0.0000	0.0000	6	1	0	0	0
jlack-gatk	INDEL	C1_5	HG002complexvar	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	C1_5	HG002complexvar	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
jli-custom	INDEL	I16_PLUS	HG002complexvar	*	95.8482	92.5898	99.3443	64.3692	1212	97	1212	8	4	50.0000
jli-custom	INDEL	I16_PLUS	HG002complexvar	het	94.3784	89.7744	99.4801	60.9343	597	68	574	3	0	0.0000
jli-custom	INDEL	I16_PLUS	HG002complexvar	hetalt	95.8474	92.5373	99.4030	66.7988	310	25	333	2	2	100.0000
jli-custom	INDEL	I16_PLUS	HG002complexvar	homalt	98.8655	98.7055	99.0260	67.1642	305	4	305	3	2	66.6667
jli-custom	INDEL	C1_5	HG002complexvar	*	0.0000	57.1429	0.0000	0.0000	4	3	0	0	0
jli-custom	INDEL	C1_5	HG002complexvar	het	0.0000	57.1429	0.0000	0.0000	4	3	0	0	0
jli-custom	INDEL	C1_5	HG002complexvar	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
jli-custom	INDEL	C1_5	HG002complexvar	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
jli-custom	INDEL	I6_15	HG002complexvar	*	98.1083	96.8489	99.4008	55.2909	4641	151	4645	28	23	82.1429
jli-custom	INDEL	I6_15	HG002complexvar	het	98.4497	97.1975	99.7346	57.2913	2289	66	2255	6	1	16.6667
jli-custom	INDEL	I6_15	HG002complexvar	hetalt	96.4875	93.2134	100.0000	52.5574	1140	83	1178	0	0
jli-custom	INDEL	I6_15	HG002complexvar	homalt	99.0196	99.8353	98.2172	53.8692	1212	2	1212	22	22	100.0000
jli-custom	INDEL	D6_15	HG002complexvar	*	98.1282	97.3972	98.8702	56.5015	5164	138	5163	59	53	89.8305
jli-custom	INDEL	D6_15	HG002complexvar	het	98.7528	98.0128	99.5040	56.9844	3058	62	3009	15	10	66.6667
jli-custom	INDEL	D6_15	HG002complexvar	hetalt	94.3987	92.4975	96.3796	46.9642	937	76	985	37	36	97.2973
jli-custom	INDEL	D6_15	HG002complexvar	homalt	99.7015	100.0000	99.4048	61.4173	1169	0	1169	7	7	100.0000

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