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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1605 1606 1607 1608 1609 1610 1611 1612 1613 ... 1720 1721 » 80401-80450 / 86044 show all
jmaeng-gatk	INDEL	D16_PLUS	HG002complexvar	*	97.4235	97.0785	97.7709	66.8650	1595	48	1579	36	31	86.1111
jmaeng-gatk	INDEL	D16_PLUS	HG002complexvar	het	98.3585	98.5547	98.1630	68.8817	1091	16	855	16	12	75.0000
jmaeng-gatk	INDEL	D16_PLUS	HG002complexvar	hetalt	92.1538	87.8543	96.8958	47.4971	217	30	437	14	14	100.0000
jmaeng-gatk	INDEL	D16_PLUS	HG002complexvar	homalt	98.6254	99.3080	97.9522	75.9046	287	2	287	6	5	83.3333
jli-custom	SNP	*	HG002complexvar	*	99.9396	99.9065	99.9727	19.0201	753676	705	753565	206	91	44.1748
jli-custom	SNP	*	HG002complexvar	het	99.9263	99.8859	99.9667	18.4399	464966	531	464872	155	54	34.8387
jli-custom	SNP	*	HG002complexvar	hetalt	99.6764	99.3548	100.0000	36.8852	308	2	308	0	0
jli-custom	SNP	*	HG002complexvar	homalt	99.9614	99.9404	99.9823	19.9145	288402	172	288385	51	37	72.5490
jmaeng-gatk	INDEL	*	HG002complexvar	*	99.2404	98.8731	99.6104	58.2744	76071	867	75939	297	248	83.5017
jmaeng-gatk	INDEL	*	HG002complexvar	het	99.5676	99.3876	99.7482	58.0104	45929	283	45560	115	73	63.4783
jmaeng-gatk	INDEL	*	HG002complexvar	hetalt	91.1572	85.1041	98.1374	66.7119	3148	551	3372	64	64	100.0000
jmaeng-gatk	INDEL	*	HG002complexvar	homalt	99.7212	99.8779	99.5650	57.3567	26994	33	27007	118	111	94.0678
jli-custom	SNP	ti	HG002complexvar	*	99.9464	99.9180	99.9748	17.5160	508019	417	507979	128	58	45.3125
jli-custom	SNP	ti	HG002complexvar	het	99.9353	99.9002	99.9704	16.9557	314452	314	314418	93	32	34.4086
jli-custom	SNP	ti	HG002complexvar	hetalt	99.5146	99.0338	100.0000	36.3354	205	2	205	0	0
jli-custom	SNP	ti	HG002complexvar	homalt	99.9648	99.9478	99.9819	18.3860	193362	101	193356	35	26	74.2857
jli-custom	SNP	tv	HG002complexvar	*	99.9252	99.8822	99.9683	21.9781	245862	290	245791	78	33	42.3077
jli-custom	SNP	tv	HG002complexvar	het	99.9074	99.8560	99.9588	21.3761	150514	217	150454	62	22	35.4839
jli-custom	SNP	tv	HG002complexvar	hetalt	99.6764	99.3548	100.0000	36.8852	308	2	308	0	0
jli-custom	SNP	tv	HG002complexvar	homalt	99.9542	99.9254	99.9832	22.8543	95040	71	95029	16	11	68.7500
hfeng-pmm2	SNP	ti	HG002complexvar	*	99.8914	99.8002	99.9829	17.3851	507420	1016	507361	87	38	43.6782
hfeng-pmm2	SNP	ti	HG002complexvar	het	99.8373	99.6928	99.9822	16.6591	313799	967	313749	56	7	12.5000
hfeng-pmm2	SNP	ti	HG002complexvar	hetalt	99.5146	99.0338	100.0000	39.5280	205	2	205	0	0
hfeng-pmm2	SNP	ti	HG002complexvar	homalt	99.9798	99.9757	99.9840	18.5051	193416	47	193407	31	31	100.0000
hfeng-pmm3	INDEL	C16_PLUS	HG002complexvar	*		0.0000	0.0000	0.0000	0	0	0	0	0
hfeng-pmm3	INDEL	C16_PLUS	HG002complexvar	het		0.0000	0.0000	0.0000	0	0	0	0	0
hfeng-pmm3	INDEL	C16_PLUS	HG002complexvar	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
hfeng-pmm3	INDEL	C16_PLUS	HG002complexvar	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
hfeng-pmm3	INDEL	C1_5	HG002complexvar	*	0.0000	85.7143	0.0000	0.0000	6	1	0	0	0
hfeng-pmm3	INDEL	C1_5	HG002complexvar	het	0.0000	85.7143	0.0000	0.0000	6	1	0	0	0
hfeng-pmm3	INDEL	C1_5	HG002complexvar	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
hfeng-pmm3	INDEL	C1_5	HG002complexvar	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
hfeng-pmm3	INDEL	C6_15	HG002complexvar	*	0.0000	100.0000	0.0000	0.0000	4	0	0	0	0
hfeng-pmm3	INDEL	C6_15	HG002complexvar	het	0.0000	100.0000	0.0000	0.0000	4	0	0	0	0
hfeng-pmm3	INDEL	C6_15	HG002complexvar	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
hfeng-pmm3	INDEL	C6_15	HG002complexvar	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
hfeng-pmm3	INDEL	D16_PLUS	HG002complexvar	*	96.9227	95.0700	98.8491	64.9955	1562	81	1546	18	11	61.1111
hfeng-pmm3	INDEL	D16_PLUS	HG002complexvar	het	96.3171	94.3089	98.4127	66.5304	1044	63	806	13	7	53.8462
hfeng-pmm3	INDEL	D16_PLUS	HG002complexvar	hetalt	96.5594	93.9271	99.3435	47.5316	232	15	454	3	3	100.0000
hfeng-pmm3	INDEL	D16_PLUS	HG002complexvar	homalt	99.1334	98.9619	99.3056	74.9565	286	3	286	2	1	50.0000
hfeng-pmm3	INDEL	*	HG002complexvar	*	99.1462	98.5027	99.7982	57.0316	75786	1152	75648	153	115	75.1634
hfeng-pmm3	INDEL	*	HG002complexvar	het	98.8973	97.9724	99.8399	56.4422	45275	937	44901	72	42	58.3333
hfeng-pmm3	INDEL	*	HG002complexvar	hetalt	97.4347	95.2149	99.7604	68.3328	3522	177	3748	9	7	77.7778
hfeng-pmm3	INDEL	*	HG002complexvar	homalt	99.7967	99.8594	99.7340	55.8371	26989	38	26999	72	66	91.6667
hfeng-pmm2	SNP	*	HG002complexvar	*	99.8743	99.7689	99.9799	18.8346	752638	1743	752495	151	59	39.0728
hfeng-pmm2	SNP	*	HG002complexvar	het	99.8103	99.6430	99.9782	18.0375	463835	1662	463706	101	15	14.8515
hfeng-pmm2	SNP	*	HG002complexvar	hetalt	99.6764	99.3548	100.0000	39.9610	308	2	308	0	0
hfeng-pmm2	SNP	*	HG002complexvar	homalt	99.9776	99.9726	99.9827	20.0544	288495	79	288481	50	44	88.0000
hfeng-pmm2	SNP	tv	HG002complexvar	*	99.8387	99.7038	99.9739	21.6976	245423	729	245339	64	21	32.8125
hfeng-pmm2	SNP	tv	HG002complexvar	het	99.7540	99.5389	99.9700	20.7785	150036	695	149957	45	8	17.7778

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