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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1604 1605 1606 1607 1608 1609 1610 1611 1612 ... 1720 1721 » 80351-80400 / 86044 show all
jlack-gatk	SNP	tv	HG002complexvar	hetalt	99.0323	99.0323	99.0323	39.5712	307	3	307	3	3	100.0000
jlack-gatk	SNP	tv	HG002complexvar	homalt	99.9385	99.8959	99.9811	22.6324	95012	99	94994	18	14	77.7778
jlack-gatk	INDEL	I6_15	HG002complexvar	*	97.6141	96.8698	98.3700	57.6968	4642	150	4647	77	75	97.4026
jlack-gatk	INDEL	I6_15	HG002complexvar	het	98.9714	98.3439	99.6068	59.5940	2316	39	2280	9	8	88.8889
jlack-gatk	INDEL	I6_15	HG002complexvar	hetalt	95.3861	91.2510	99.9136	55.5641	1116	107	1157	1	1	100.0000
jlack-gatk	INDEL	I6_15	HG002complexvar	homalt	97.1497	99.6705	94.7533	55.9047	1210	4	1210	67	66	98.5075
jlack-gatk	SNP	*	HG002complexvar	*	99.9118	99.8944	99.9292	19.3948	753584	797	753425	534	201	37.6404
jlack-gatk	SNP	*	HG002complexvar	het	99.8914	99.8855	99.8973	19.1615	464964	533	464834	478	152	31.7992
jlack-gatk	SNP	*	HG002complexvar	hetalt	99.0323	99.0323	99.0323	39.5712	307	3	307	3	3	100.0000
jlack-gatk	SNP	*	HG002complexvar	homalt	99.9456	99.9096	99.9816	19.7398	288313	261	288284	53	46	86.7925
hfeng-pmm3	INDEL	D6_15	HG002complexvar	*	97.0065	94.7378	99.3864	56.7243	5023	279	5021	31	24	77.4194
hfeng-pmm3	INDEL	D6_15	HG002complexvar	het	95.8678	92.7244	99.2318	57.2218	2893	227	2842	22	17	77.2727
hfeng-pmm3	INDEL	D6_15	HG002complexvar	hetalt	97.4277	95.1629	99.8030	47.8149	964	49	1013	2	1	50.0000
hfeng-pmm3	INDEL	D6_15	HG002complexvar	homalt	99.5730	99.7434	99.4032	61.3382	1166	3	1166	7	6	85.7143
hfeng-pmm3	SNP	*	HG002complexvar	*	99.8875	99.7894	99.9859	18.8968	752792	1589	752645	106	40	37.7358
hfeng-pmm3	SNP	*	HG002complexvar	het	99.8290	99.6758	99.9825	18.2080	463988	1509	463859	81	16	19.7531
hfeng-pmm3	SNP	*	HG002complexvar	hetalt	99.6764	99.3548	100.0000	37.5254	308	2	308	0	0
hfeng-pmm3	SNP	*	HG002complexvar	homalt	99.9822	99.9730	99.9913	19.9554	288496	78	288478	25	24	96.0000
hfeng-pmm3	INDEL	I6_15	HG002complexvar	*	98.1740	97.0367	99.3383	57.2224	4650	142	4654	31	31	100.0000
hfeng-pmm3	INDEL	I6_15	HG002complexvar	het	98.4917	97.0701	99.9556	58.8257	2286	69	2250	1	1	100.0000
hfeng-pmm3	INDEL	I6_15	HG002complexvar	hetalt	97.0105	94.1946	100.0000	56.3370	1152	71	1192	0	0
hfeng-pmm3	INDEL	I6_15	HG002complexvar	homalt	98.6971	99.8353	97.5845	54.9183	1212	2	1212	30	30	100.0000
hfeng-pmm3	INDEL	D1_5	HG002complexvar	*	99.2121	98.5267	99.9072	56.6840	32233	482	32285	30	19	63.3333
hfeng-pmm3	INDEL	D1_5	HG002complexvar	het	98.9670	98.0448	99.9068	54.1875	20359	406	20363	19	11	57.8947
hfeng-pmm3	INDEL	D1_5	HG002complexvar	hetalt	97.5431	95.3402	99.8501	71.8149	1289	63	1332	2	0	0.0000
hfeng-pmm3	INDEL	D1_5	HG002complexvar	homalt	99.8962	99.8773	99.9151	58.2388	10585	13	10590	9	8	88.8889
hfeng-pmm3	INDEL	I1_5	HG002complexvar	*	99.5912	99.2956	99.8886	56.4158	33128	235	33172	37	24	64.8649
hfeng-pmm3	INDEL	I1_5	HG002complexvar	het	99.5309	99.1588	99.9057	57.5378	18036	153	18015	17	6	35.2941
hfeng-pmm3	INDEL	I1_5	HG002complexvar	hetalt	98.0250	96.2341	99.8839	70.2777	1661	65	1721	2	2	100.0000
hfeng-pmm3	INDEL	I1_5	HG002complexvar	homalt	99.8699	99.8736	99.8662	51.8330	13431	17	13436	18	16	88.8889
hfeng-pmm3	SNP	ti	HG002complexvar	*	99.9019	99.8171	99.9868	17.4486	507506	930	507446	67	25	37.3134
hfeng-pmm3	SNP	ti	HG002complexvar	het	99.8511	99.7192	99.9834	16.8098	313882	884	313832	52	10	19.2308
hfeng-pmm3	SNP	ti	HG002complexvar	hetalt	99.5146	99.0338	100.0000	37.3089	205	2	205	0	0
hfeng-pmm3	SNP	ti	HG002complexvar	homalt	99.9848	99.9773	99.9922	18.4374	193419	44	193409	15	15	100.0000
hfeng-pmm3	INDEL	I16_PLUS	HG002complexvar	*	98.2632	97.2498	99.2980	66.8048	1273	36	1273	9	8	88.8889
hfeng-pmm3	INDEL	I16_PLUS	HG002complexvar	het	98.6280	97.2932	100.0000	62.8860	647	18	625	0	0
hfeng-pmm3	INDEL	I16_PLUS	HG002complexvar	hetalt	96.8227	94.6269	99.1228	69.7613	317	18	339	3	3	100.0000
hfeng-pmm3	INDEL	I16_PLUS	HG002complexvar	homalt	99.0385	100.0000	98.0952	69.9140	309	0	309	6	5	83.3333
jmaeng-gatk	INDEL	C16_PLUS	HG002complexvar	*		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C16_PLUS	HG002complexvar	het		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C16_PLUS	HG002complexvar	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C16_PLUS	HG002complexvar	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C1_5	HG002complexvar	*	0.0000	85.7143	0.0000	0.0000	6	1	0	0	0
jmaeng-gatk	INDEL	C1_5	HG002complexvar	het	0.0000	85.7143	0.0000	0.0000	6	1	0	0	0
jmaeng-gatk	INDEL	C1_5	HG002complexvar	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C1_5	HG002complexvar	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C6_15	HG002complexvar	*	0.0000	100.0000	0.0000	0.0000	4	0	0	0	0
jmaeng-gatk	INDEL	C6_15	HG002complexvar	het	0.0000	100.0000	0.0000	0.0000	4	0	0	0	0
jmaeng-gatk	INDEL	C6_15	HG002complexvar	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C6_15	HG002complexvar	homalt		0.0000	0.0000	0.0000	0	0	0	0	0

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