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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1603 1604 1605 1606 1607 1608 1609 1610 1611 ... 1720 1721 » 80301-80350 / 86044 show all
hfeng-pmm2	INDEL	D6_15	HG002complexvar	*	96.9573	94.6624	99.3663	56.8597	5019	283	5018	32	26	81.2500
hfeng-pmm2	INDEL	D6_15	HG002complexvar	het	95.8142	92.5641	99.3009	57.1386	2888	232	2841	20	16	80.0000
hfeng-pmm2	INDEL	D6_15	HG002complexvar	hetalt	97.4274	95.1629	99.8024	48.6555	964	49	1010	2	1	50.0000
hfeng-pmm2	INDEL	D6_15	HG002complexvar	homalt	99.4885	99.8289	99.1504	61.5359	1167	2	1167	10	9	90.0000
hfeng-pmm2	INDEL	I16_PLUS	HG002complexvar	*	98.3417	97.4026	99.2991	67.2031	1275	34	1275	9	8	88.8889
hfeng-pmm2	INDEL	I16_PLUS	HG002complexvar	het	98.8593	97.7444	100.0000	63.5519	650	15	628	0	0
hfeng-pmm2	INDEL	I16_PLUS	HG002complexvar	hetalt	96.6649	94.3284	99.1202	69.9029	316	19	338	3	3	100.0000
hfeng-pmm2	INDEL	I16_PLUS	HG002complexvar	homalt	99.0385	100.0000	98.0952	70.2550	309	0	309	6	5	83.3333
hfeng-pmm2	INDEL	I1_5	HG002complexvar	*	99.5522	99.2597	99.8464	56.6743	33116	247	33159	51	38	74.5098
hfeng-pmm2	INDEL	I1_5	HG002complexvar	het	99.4756	99.0819	99.8724	57.6818	18022	167	18002	23	11	47.8261
hfeng-pmm2	INDEL	I1_5	HG002complexvar	hetalt	98.0250	96.2341	99.8839	71.1509	1661	65	1720	2	2	100.0000
hfeng-pmm2	INDEL	I1_5	HG002complexvar	homalt	99.8477	99.8885	99.8069	52.0702	13433	15	13437	26	25	96.1538
hfeng-pmm2	INDEL	I6_15	HG002complexvar	*	98.1553	97.1411	99.1910	57.4123	4655	137	4659	38	37	97.3684
hfeng-pmm2	INDEL	I6_15	HG002complexvar	het	98.4267	97.0276	99.8668	58.9949	2285	70	2249	3	2	66.6667
hfeng-pmm2	INDEL	I6_15	HG002complexvar	hetalt	97.2701	94.6852	100.0000	56.4680	1158	65	1198	0	0
hfeng-pmm2	INDEL	I6_15	HG002complexvar	homalt	98.4965	99.8353	97.1933	55.2244	1212	2	1212	35	35	100.0000
hfeng-pmm2	INDEL	D1_5	HG002complexvar	*	99.1842	98.4778	99.9009	57.1533	32217	498	32268	32	21	65.6250
hfeng-pmm2	INDEL	D1_5	HG002complexvar	het	98.9180	97.9581	99.8969	54.5187	20341	424	20346	21	14	66.6667
hfeng-pmm2	INDEL	D1_5	HG002complexvar	hetalt	97.7751	95.7840	99.8506	73.3373	1295	57	1337	2	0	0.0000
hfeng-pmm2	INDEL	D1_5	HG002complexvar	homalt	99.8773	99.8396	99.9150	58.5881	10581	17	10585	9	7	77.7778
hfeng-pmm2	INDEL	C1_5	HG002complexvar	*	0.0000	85.7143	0.0000	0.0000	6	1	0	0	0
hfeng-pmm2	INDEL	C1_5	HG002complexvar	het	0.0000	85.7143	0.0000	0.0000	6	1	0	0	0
hfeng-pmm2	INDEL	C1_5	HG002complexvar	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
hfeng-pmm2	INDEL	C1_5	HG002complexvar	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
hfeng-pmm2	INDEL	D16_PLUS	HG002complexvar	*	96.3580	94.4005	98.3985	65.2184	1551	92	1536	25	15	60.0000
hfeng-pmm2	INDEL	D16_PLUS	HG002complexvar	het	95.7182	93.4959	98.0488	66.5579	1035	72	804	16	7	43.7500
hfeng-pmm2	INDEL	D16_PLUS	HG002complexvar	hetalt	96.5553	93.9271	99.3348	48.1609	232	15	448	3	3	100.0000
hfeng-pmm2	INDEL	D16_PLUS	HG002complexvar	homalt	98.1002	98.2699	97.9310	75.1286	284	5	284	6	5	83.3333
jli-custom	INDEL	C16_PLUS	HG002complexvar	*		0.0000	0.0000	0.0000	0	0	0	0	0
jli-custom	INDEL	C16_PLUS	HG002complexvar	het		0.0000	0.0000	0.0000	0	0	0	0	0
jli-custom	INDEL	C16_PLUS	HG002complexvar	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
jli-custom	INDEL	C16_PLUS	HG002complexvar	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	I1_5	HG002complexvar	*	99.5214	99.3556	99.6877	57.0609	33148	215	33197	104	72	69.2308
jlack-gatk	INDEL	I1_5	HG002complexvar	het	99.5954	99.5052	99.6857	57.8787	18099	90	18080	57	28	49.1228
jlack-gatk	INDEL	I1_5	HG002complexvar	hetalt	96.7853	94.0324	99.7041	70.7004	1623	103	1685	5	4	80.0000
jlack-gatk	INDEL	I1_5	HG002complexvar	homalt	99.7623	99.8364	99.6883	53.0964	13426	22	13432	42	40	95.2381
jli-custom	INDEL	*	HG002complexvar	*	99.2454	98.7574	99.7382	56.8994	75982	956	75827	199	151	75.8794
jli-custom	INDEL	*	HG002complexvar	het	99.4410	99.0457	99.8394	56.1111	45771	441	45384	73	32	43.8356
jli-custom	INDEL	*	HG002complexvar	hetalt	92.1678	86.8343	98.1995	67.3509	3212	487	3436	63	62	98.4127
jli-custom	INDEL	*	HG002complexvar	homalt	99.8318	99.8964	99.7673	56.4104	26999	28	27007	63	57	90.4762
jlack-gatk	INDEL	I16_PLUS	HG002complexvar	*	97.1912	96.4859	97.9070	66.9992	1263	46	1263	27	23	85.1852
jlack-gatk	INDEL	I16_PLUS	HG002complexvar	het	98.7797	98.0451	99.5253	64.0909	652	13	629	3	1	33.3333
jlack-gatk	INDEL	I16_PLUS	HG002complexvar	hetalt	94.5436	90.1493	99.3884	68.8275	302	33	325	2	1	50.0000
jlack-gatk	INDEL	I16_PLUS	HG002complexvar	homalt	96.5625	100.0000	93.3535	69.9091	309	0	309	22	21	95.4545
jlack-gatk	SNP	ti	HG002complexvar	*	99.9170	99.8944	99.9396	17.8349	507899	537	507834	307	122	39.7394
jlack-gatk	SNP	ti	HG002complexvar	het	99.8980	99.8818	99.9142	17.5660	314394	372	314340	270	88	32.5926
jlack-gatk	SNP	ti	HG002complexvar	hetalt	98.7893	98.5507	99.0291	39.5894	204	3	204	2	2	100.0000
jlack-gatk	SNP	ti	HG002complexvar	homalt	99.9491	99.9163	99.9819	18.2375	193301	162	193290	35	32	91.4286
jlack-gatk	SNP	tv	HG002complexvar	*	99.9000	99.8932	99.9069	22.4572	245889	263	245795	229	81	35.3712
jlack-gatk	SNP	tv	HG002complexvar	het	99.8776	99.8932	99.8620	22.3009	150570	161	150494	208	64	30.7692

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