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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1599 1600 1601 1602 1603 1604 1605 1606 1607 ... 1720 1721 » 80101-80150 / 86044 show all
bgallagher-sentieon	INDEL	C1_5	HG002complexvar	*	0.0000	85.7143	0.0000	0.0000	6	1	0	0	0
bgallagher-sentieon	INDEL	C1_5	HG002complexvar	het	0.0000	85.7143	0.0000	0.0000	6	1	0	0	0
bgallagher-sentieon	INDEL	C1_5	HG002complexvar	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	C1_5	HG002complexvar	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
cchapple-custom	INDEL	C1_5	HG002complexvar	*	91.1355	85.7143	97.2887	77.3646	6	1	2440	68	25	36.7647
cchapple-custom	INDEL	C1_5	HG002complexvar	het	90.6065	85.7143	96.0910	77.9776	6	1	1647	67	24	35.8209
cchapple-custom	INDEL	C1_5	HG002complexvar	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
cchapple-custom	INDEL	C1_5	HG002complexvar	homalt	0.0000	0.0000	99.8741	75.9175	0	0	793	1	1	100.0000
cchapple-custom	INDEL	C6_15	HG002complexvar	*	96.6006	100.0000	93.4247	83.0940	4	0	341	24	11	45.8333
cchapple-custom	INDEL	C6_15	HG002complexvar	het	95.9847	100.0000	92.2794	83.1056	4	0	251	21	10	47.6190
cchapple-custom	INDEL	C6_15	HG002complexvar	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
cchapple-custom	INDEL	C6_15	HG002complexvar	homalt	0.0000	0.0000	96.7742	83.0601	0	0	90	3	1	33.3333
cchapple-custom	INDEL	*	HG002complexvar	*	98.8567	98.4455	99.2713	55.5354	75742	1196	78742	578	462	79.9308
cchapple-custom	INDEL	*	HG002complexvar	het	98.8709	98.5307	99.2135	57.1695	45533	679	52101	413	306	74.0920
cchapple-custom	INDEL	*	HG002complexvar	hetalt	0.0000	90.1865	0.0000	0.0000	3336	363	0	0	0
cchapple-custom	INDEL	*	HG002complexvar	homalt	99.4073	99.4302	99.3845	51.9433	26873	154	26641	165	156	94.5455
cchapple-custom	INDEL	C16_PLUS	HG002complexvar	*	0.0000	0.0000	89.8305	89.5390	0	0	53	6	5	83.3333
cchapple-custom	INDEL	C16_PLUS	HG002complexvar	het	0.0000	0.0000	84.6154	90.1515	0	0	33	6	5	83.3333
cchapple-custom	INDEL	C16_PLUS	HG002complexvar	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
cchapple-custom	INDEL	C16_PLUS	HG002complexvar	homalt	0.0000	0.0000	100.0000	88.0952	0	0	20	0	0
bgallagher-sentieon	INDEL	I6_15	HG002complexvar	*	98.3311	97.7254	98.9445	57.6259	4683	109	4687	50	49	98.0000
bgallagher-sentieon	INDEL	I6_15	HG002complexvar	het	99.2727	98.8535	99.6955	59.4318	2328	27	2292	7	6	85.7143
bgallagher-sentieon	INDEL	I6_15	HG002complexvar	hetalt	96.5751	93.3769	100.0000	55.8131	1142	81	1182	0	0
bgallagher-sentieon	INDEL	I6_15	HG002complexvar	homalt	98.2186	99.9176	96.5764	55.7279	1213	1	1213	43	43	100.0000
bgallagher-sentieon	SNP	ti	HG002complexvar	*	99.9558	99.9337	99.9780	17.4939	508099	337	508035	112	53	47.3214
bgallagher-sentieon	SNP	ti	HG002complexvar	het	99.9477	99.9234	99.9720	16.9632	314525	241	314471	88	29	32.9545
bgallagher-sentieon	SNP	ti	HG002complexvar	hetalt	99.5146	99.0338	100.0000	35.3312	205	2	205	0	0
bgallagher-sentieon	SNP	ti	HG002complexvar	homalt	99.9695	99.9514	99.9876	18.3190	193369	94	193359	24	24	100.0000
bgallagher-sentieon	SNP	tv	HG002complexvar	*	99.9492	99.9313	99.9671	22.0213	245983	169	245892	81	31	38.2716
bgallagher-sentieon	SNP	tv	HG002complexvar	het	99.9389	99.9237	99.9542	21.4883	150616	115	150540	69	21	30.4348
bgallagher-sentieon	SNP	tv	HG002complexvar	hetalt	99.6764	99.3548	100.0000	35.9667	308	2	308	0	0
bgallagher-sentieon	SNP	tv	HG002complexvar	homalt	99.9663	99.9453	99.9874	22.7972	95059	52	95044	12	10	83.3333
bgallagher-sentieon	SNP	*	HG002complexvar	*	99.9538	99.9332	99.9744	19.0217	753877	504	753722	193	84	43.5233
bgallagher-sentieon	SNP	*	HG002complexvar	het	99.9449	99.9235	99.9662	18.4844	465141	356	465011	157	50	31.8471
bgallagher-sentieon	SNP	*	HG002complexvar	hetalt	99.6764	99.3548	100.0000	35.9667	308	2	308	0	0
bgallagher-sentieon	SNP	*	HG002complexvar	homalt	99.9685	99.9494	99.9875	19.8511	288428	146	288403	36	34	94.4444
asubramanian-gatk	SNP	tv	HG002complexvar	*	98.0754	96.2442	99.9776	22.6117	236907	9245	236824	53	18	33.9623
asubramanian-gatk	SNP	tv	HG002complexvar	het	98.1875	96.4619	99.9759	22.1458	145398	5333	145329	35	10	28.5714
asubramanian-gatk	SNP	tv	HG002complexvar	hetalt	94.3522	91.6129	97.2603	39.0397	284	26	284	8	0	0.0000
asubramanian-gatk	SNP	tv	HG002complexvar	homalt	97.9093	95.9142	99.9890	23.2773	91225	3886	91211	10	8	80.0000
bgallagher-sentieon	INDEL	*	HG002complexvar	*	99.4954	99.3774	99.6137	58.2041	76459	479	76328	296	257	86.8243
bgallagher-sentieon	INDEL	*	HG002complexvar	het	99.6698	99.5477	99.7922	57.6447	46003	209	45633	95	61	64.2105
bgallagher-sentieon	INDEL	*	HG002complexvar	hetalt	95.7653	93.2955	98.3694	67.9599	3451	248	3680	61	61	100.0000
bgallagher-sentieon	INDEL	*	HG002complexvar	homalt	99.7010	99.9186	99.4844	57.3638	27005	22	27015	140	135	96.4286
asubramanian-gatk	SNP	ti	HG002complexvar	*	98.3380	96.7457	99.9835	17.8536	491890	16546	491830	81	36	44.4444
asubramanian-gatk	SNP	ti	HG002complexvar	het	98.4409	96.9492	99.9794	17.3446	305163	9603	305113	63	21	33.3333
asubramanian-gatk	SNP	ti	HG002complexvar	hetalt	94.4724	90.8213	98.4293	40.4984	188	19	188	3	0	0.0000
asubramanian-gatk	SNP	ti	HG002complexvar	homalt	98.1740	96.4210	99.9920	18.6413	186539	6924	186529	15	15	100.0000
asubramanian-gatk	INDEL	D6_15	HG002complexvar	*	97.5846	96.7748	98.4081	58.8477	5131	171	5131	83	77	92.7711
asubramanian-gatk	INDEL	D6_15	HG002complexvar	het	98.2617	97.2756	99.2679	59.9547	3035	85	2983	22	18	81.8182

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