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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1597 1598 1599 1600 1601 1602 1603 1604 1605 ... 1720 1721 » 80001-80050 / 86044 show all
eyeh-varpipe	INDEL	I6_15	HG002complexvar	*	76.1535	69.3656	84.4139	46.8082	3324	1468	3320	613	606	98.8581
eyeh-varpipe	INDEL	I6_15	HG002complexvar	het	83.9009	81.8684	86.0369	46.7354	1928	427	1867	303	298	98.3498
eyeh-varpipe	INDEL	I6_15	HG002complexvar	hetalt	50.4268	34.5053	93.6293	59.7826	422	801	485	33	33	100.0000
eyeh-varpipe	INDEL	I6_15	HG002complexvar	homalt	78.9714	80.2306	77.7510	38.7303	974	240	968	277	275	99.2780
eyeh-varpipe	INDEL	D6_15	HG002complexvar	*	80.0189	76.9521	83.3403	49.7370	4080	1222	3982	796	779	97.8643
eyeh-varpipe	INDEL	D6_15	HG002complexvar	het	89.4381	87.7564	91.1854	45.1275	2738	382	2100	203	195	96.0591
eyeh-varpipe	INDEL	D6_15	HG002complexvar	hetalt	51.3277	35.9329	89.8020	58.8427	364	649	907	103	102	99.0291
eyeh-varpipe	INDEL	D6_15	HG002complexvar	homalt	74.1328	83.6612	66.5529	48.6865	978	191	975	490	482	98.3673
dgrover-gatk	INDEL	C6_15	HG002complexvar	*	0.0000	100.0000	0.0000	0.0000	4	0	0	0	0
dgrover-gatk	INDEL	C6_15	HG002complexvar	het	0.0000	100.0000	0.0000	0.0000	4	0	0	0	0
dgrover-gatk	INDEL	C6_15	HG002complexvar	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	C6_15	HG002complexvar	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	D16_PLUS	HG002complexvar	*	97.6446	97.6263	97.6630	66.8096	1604	39	1588	38	27	71.0526
dgrover-gatk	INDEL	D16_PLUS	HG002complexvar	het	98.2761	98.7353	97.8211	68.7119	1093	14	853	19	9	47.3684
dgrover-gatk	INDEL	D16_PLUS	HG002complexvar	hetalt	93.7238	90.6883	96.9697	48.0899	224	23	448	14	14	100.0000
dgrover-gatk	INDEL	D16_PLUS	HG002complexvar	homalt	98.7952	99.3080	98.2877	76.1047	287	2	287	5	4	80.0000
dgrover-gatk	INDEL	C1_5	HG002complexvar	*	0.0000	85.7143	0.0000	0.0000	6	1	0	0	0
dgrover-gatk	INDEL	C1_5	HG002complexvar	het	0.0000	85.7143	0.0000	0.0000	6	1	0	0	0
dgrover-gatk	INDEL	C1_5	HG002complexvar	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	C1_5	HG002complexvar	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-vqsr	SNP	*	HG002complexvar	*	98.7826	97.6098	99.9840	19.7255	736350	18031	736201	118	58	49.1525
ckim-vqsr	SNP	*	HG002complexvar	het	99.0965	98.2281	99.9803	19.3098	457249	8248	457124	90	32	35.5556
ckim-vqsr	SNP	*	HG002complexvar	hetalt	96.6667	93.5484	100.0000	40.6953	290	20	290	0	0
ckim-vqsr	SNP	*	HG002complexvar	homalt	98.2744	96.6168	99.9900	20.3688	278811	9763	278787	28	26	92.8571
ckim-vqsr	SNP	ti	HG002complexvar	*	98.8535	97.7474	99.9849	18.1351	496983	11453	496925	75	38	50.6667
ckim-vqsr	SNP	ti	HG002complexvar	het	99.1493	98.3302	99.9822	17.7224	309510	5256	309462	55	18	32.7273
ckim-vqsr	SNP	ti	HG002complexvar	hetalt	96.2406	92.7536	100.0000	40.3727	192	15	192	0	0
ckim-vqsr	SNP	ti	HG002complexvar	homalt	98.3712	96.8046	99.9893	18.7775	187281	6182	187271	20	20	100.0000
dgrover-gatk	INDEL	*	HG002complexvar	*	99.5612	99.4476	99.6751	58.4475	76513	425	76380	249	210	84.3373
dgrover-gatk	INDEL	*	HG002complexvar	het	99.6862	99.5586	99.8141	57.9282	46008	204	45634	85	51	60.0000
dgrover-gatk	INDEL	*	HG002complexvar	hetalt	96.4173	94.5931	98.3131	68.7891	3499	200	3730	64	63	98.4375
dgrover-gatk	INDEL	*	HG002complexvar	homalt	99.7765	99.9223	99.6312	57.3581	27006	21	27016	100	96	96.0000
dgrover-gatk	INDEL	C16_PLUS	HG002complexvar	*		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	C16_PLUS	HG002complexvar	het		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	C16_PLUS	HG002complexvar	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	C16_PLUS	HG002complexvar	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-vqsr	SNP	tv	HG002complexvar	*	98.6339	97.3216	99.9820	22.8566	239559	6593	239468	43	20	46.5116
ckim-vqsr	SNP	tv	HG002complexvar	het	98.9859	98.0150	99.9763	22.4456	147739	2992	147662	35	14	40.0000
ckim-vqsr	SNP	tv	HG002complexvar	hetalt	96.6667	93.5484	100.0000	40.6953	290	20	290	0	0
ckim-vqsr	SNP	tv	HG002complexvar	homalt	98.0771	96.2349	99.9913	23.4384	91530	3581	91516	8	6	75.0000
ckim-vqsr	INDEL	I1_5	HG002complexvar	*	99.3737	98.9030	99.8489	56.8918	32997	366	33042	50	41	82.0000
ckim-vqsr	INDEL	I1_5	HG002complexvar	het	99.6583	99.4392	99.8784	58.1585	18087	102	18064	22	13	59.0909
ckim-vqsr	INDEL	I1_5	HG002complexvar	hetalt	92.1493	85.6315	99.7409	68.7323	1478	248	1540	4	4	100.0000
ckim-vqsr	INDEL	I1_5	HG002complexvar	homalt	99.8514	99.8810	99.8217	52.9334	13432	16	13438	24	24	100.0000
ckim-vqsr	INDEL	I6_15	HG002complexvar	*	98.1251	97.1828	99.0859	57.0293	4657	135	4661	43	42	97.6744
ckim-vqsr	INDEL	I6_15	HG002complexvar	het	99.2942	98.8110	99.7821	59.6661	2327	28	2290	5	4	80.0000
ckim-vqsr	INDEL	I6_15	HG002complexvar	hetalt	95.4701	91.3328	100.0000	52.5604	1117	106	1158	0	0
ckim-vqsr	INDEL	I6_15	HG002complexvar	homalt	98.4178	99.9176	96.9624	55.5753	1213	1	1213	38	38	100.0000
ckim-vqsr	INDEL	I16_PLUS	HG002complexvar	*	98.2632	97.2498	99.2980	66.9502	1273	36	1273	9	9	100.0000
ckim-vqsr	INDEL	I16_PLUS	HG002complexvar	het	98.7823	97.5940	100.0000	64.8679	649	16	625	0	0

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