PrecisionFDA
Truth Challenge
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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry | Type | Subtype | Subset | Genotype | F-score | Recall | Precision | Frac_NA | Truth TP | Truth FN | Query TP | Query FP | FP gt | % FP ma | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
78701-78750 / 86044 show all | |||||||||||||||
anovak-vg | INDEL | C16_PLUS | HG002compoundhet | * | 0.0000 | 0.0000 | 87.5000 | 0 | 0 | 0 | 1 | 0 | 0.0000 | ||
anovak-vg | INDEL | C16_PLUS | HG002compoundhet | het | 0.0000 | 0.0000 | 87.5000 | 0 | 0 | 0 | 1 | 0 | 0.0000 | ||
anovak-vg | INDEL | C16_PLUS | HG002compoundhet | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
anovak-vg | INDEL | C16_PLUS | HG002compoundhet | homalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
anovak-vg | INDEL | C6_15 | HG002compoundhet | * | 0.0000 | 0.0000 | 8.8235 | 73.0159 | 0 | 0 | 3 | 31 | 4 | 12.9032 | |
anovak-vg | INDEL | C6_15 | HG002compoundhet | het | 0.0000 | 0.0000 | 8.8235 | 71.9008 | 0 | 0 | 3 | 31 | 4 | 12.9032 | |
anovak-vg | INDEL | C6_15 | HG002compoundhet | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
anovak-vg | INDEL | C6_15 | HG002compoundhet | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
anovak-vg | INDEL | D16_PLUS | HG002compoundhet | * | 28.7549 | 21.7001 | 42.6065 | 32.2197 | 508 | 1833 | 510 | 687 | 477 | 69.4323 | |
anovak-vg | INDEL | D16_PLUS | HG002compoundhet | het | 47.7497 | 45.4321 | 50.3165 | 27.0208 | 184 | 221 | 477 | 471 | 319 | 67.7282 | |
anovak-vg | INDEL | D16_PLUS | HG002compoundhet | hetalt | 0.0000 | 16.4938 | 0.0000 | 0.0000 | 318 | 1610 | 0 | 0 | 0 | ||
anovak-vg | INDEL | D16_PLUS | HG002compoundhet | homalt | 22.5256 | 75.0000 | 13.2530 | 46.6809 | 6 | 2 | 33 | 216 | 158 | 73.1481 | |
anovak-vg | INDEL | C1_5 | HG002compoundhet | * | 24.7863 | 100.0000 | 14.1463 | 75.0305 | 1 | 0 | 29 | 176 | 15 | 8.5227 | |
anovak-vg | INDEL | C1_5 | HG002compoundhet | het | 0.0000 | 0.0000 | 13.6364 | 74.7449 | 0 | 0 | 27 | 171 | 11 | 6.4328 | |
anovak-vg | INDEL | C1_5 | HG002compoundhet | hetalt | 0.0000 | 100.0000 | 0.0000 | 0.0000 | 1 | 0 | 0 | 0 | 0 | ||
anovak-vg | INDEL | C1_5 | HG002compoundhet | homalt | 0.0000 | 0.0000 | 28.5714 | 81.0811 | 0 | 0 | 2 | 5 | 4 | 80.0000 | |
bgallagher-sentieon | INDEL | D6_15 | HG002compoundhet | * | 94.8572 | 94.2753 | 95.4464 | 36.1821 | 8514 | 517 | 8510 | 406 | 403 | 99.2611 | |
bgallagher-sentieon | INDEL | D6_15 | HG002compoundhet | het | 89.1342 | 98.1308 | 81.6487 | 68.8379 | 840 | 16 | 832 | 187 | 185 | 98.9305 | |
bgallagher-sentieon | INDEL | D6_15 | HG002compoundhet | hetalt | 96.6337 | 93.8535 | 99.5837 | 23.7576 | 7650 | 501 | 7654 | 32 | 32 | 100.0000 | |
bgallagher-sentieon | INDEL | D6_15 | HG002compoundhet | homalt | 20.4255 | 100.0000 | 11.3744 | 65.9677 | 24 | 0 | 24 | 187 | 186 | 99.4652 | |
bgallagher-sentieon | INDEL | C16_PLUS | HG002compoundhet | * | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
bgallagher-sentieon | INDEL | C16_PLUS | HG002compoundhet | het | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
bgallagher-sentieon | INDEL | C16_PLUS | HG002compoundhet | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
bgallagher-sentieon | INDEL | C16_PLUS | HG002compoundhet | homalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
bgallagher-sentieon | INDEL | I1_5 | HG002compoundhet | * | 95.0768 | 93.6792 | 96.5167 | 65.8897 | 11575 | 781 | 11582 | 418 | 416 | 99.5215 | |
bgallagher-sentieon | INDEL | I1_5 | HG002compoundhet | het | 94.0512 | 98.4706 | 90.0115 | 86.3970 | 837 | 13 | 784 | 87 | 85 | 97.7011 | |
bgallagher-sentieon | INDEL | I1_5 | HG002compoundhet | hetalt | 96.4336 | 93.1377 | 99.9714 | 55.3771 | 10410 | 767 | 10470 | 3 | 3 | 100.0000 | |
bgallagher-sentieon | INDEL | I1_5 | HG002compoundhet | homalt | 66.5990 | 99.6960 | 50.0000 | 87.6390 | 328 | 1 | 328 | 328 | 328 | 100.0000 | |
bgallagher-sentieon | INDEL | D16_PLUS | HG002compoundhet | * | 95.0525 | 94.7886 | 95.3179 | 35.3692 | 2219 | 122 | 2219 | 109 | 106 | 97.2477 | |
bgallagher-sentieon | INDEL | D16_PLUS | HG002compoundhet | het | 87.9457 | 99.2593 | 78.9474 | 58.5057 | 402 | 3 | 285 | 76 | 73 | 96.0526 | |
bgallagher-sentieon | INDEL | D16_PLUS | HG002compoundhet | hetalt | 96.6214 | 93.8278 | 99.5863 | 26.4359 | 1809 | 119 | 1926 | 8 | 8 | 100.0000 | |
bgallagher-sentieon | INDEL | D16_PLUS | HG002compoundhet | homalt | 39.0244 | 100.0000 | 24.2424 | 67.9612 | 8 | 0 | 8 | 25 | 25 | 100.0000 | |
bgallagher-sentieon | INDEL | D1_5 | HG002compoundhet | * | 95.8155 | 94.7855 | 96.8682 | 66.0428 | 11597 | 638 | 11599 | 375 | 373 | 99.4667 | |
bgallagher-sentieon | INDEL | D1_5 | HG002compoundhet | het | 95.8083 | 98.4954 | 93.2640 | 79.3041 | 1702 | 26 | 1703 | 123 | 122 | 99.1870 | |
bgallagher-sentieon | INDEL | D1_5 | HG002compoundhet | hetalt | 96.7320 | 94.0192 | 99.6060 | 57.1663 | 9605 | 611 | 9606 | 38 | 38 | 100.0000 | |
bgallagher-sentieon | INDEL | D1_5 | HG002compoundhet | homalt | 72.9560 | 99.6564 | 57.5397 | 87.1560 | 290 | 1 | 290 | 214 | 213 | 99.5327 | |
bgallagher-sentieon | INDEL | C1_5 | HG002compoundhet | * | 0.0000 | 100.0000 | 0.0000 | 0.0000 | 1 | 0 | 0 | 0 | 0 | ||
bgallagher-sentieon | INDEL | C1_5 | HG002compoundhet | het | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
bgallagher-sentieon | INDEL | C1_5 | HG002compoundhet | hetalt | 0.0000 | 100.0000 | 0.0000 | 0.0000 | 1 | 0 | 0 | 0 | 0 | ||
bgallagher-sentieon | INDEL | C1_5 | HG002compoundhet | homalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
bgallagher-sentieon | INDEL | C6_15 | HG002compoundhet | * | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
bgallagher-sentieon | INDEL | C6_15 | HG002compoundhet | het | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
bgallagher-sentieon | INDEL | C6_15 | HG002compoundhet | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
bgallagher-sentieon | INDEL | C6_15 | HG002compoundhet | homalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
bgallagher-sentieon | INDEL | I16_PLUS | HG002compoundhet | * | 93.0399 | 90.7606 | 95.4367 | 53.0631 | 1945 | 198 | 1945 | 93 | 93 | 100.0000 | |
bgallagher-sentieon | INDEL | I16_PLUS | HG002compoundhet | het | 83.6026 | 95.7447 | 74.1935 | 93.6735 | 45 | 2 | 23 | 8 | 8 | 100.0000 | |
bgallagher-sentieon | INDEL | I16_PLUS | HG002compoundhet | hetalt | 95.0877 | 90.6355 | 100.0000 | 45.8521 | 1897 | 196 | 1919 | 0 | 0 | ||
bgallagher-sentieon | INDEL | I16_PLUS | HG002compoundhet | homalt | 6.5934 | 100.0000 | 3.4091 | 71.4286 | 3 | 0 | 3 | 85 | 85 | 100.0000 | |
raldana-dualsentieon | INDEL | I16_PLUS | HG002compoundhet | * | 92.4081 | 89.1741 | 95.8856 | 50.9476 | 1911 | 232 | 1911 | 82 | 81 | 98.7805 | |
raldana-dualsentieon | INDEL | I16_PLUS | HG002compoundhet | het | 83.6199 | 89.3617 | 78.5714 | 93.1540 | 42 | 5 | 22 | 6 | 6 | 100.0000 |