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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1559 1560 1561 1562 1563 1564 1565 1566 1567 ... 1720 1721 » 78101-78150 / 86044 show all
hfeng-pmm3	INDEL	I1_5	HG002compoundhet	*	96.3303	94.1081	98.6599	63.2057	11628	728	11632	158	151	95.5696
hfeng-pmm3	INDEL	I1_5	HG002compoundhet	het	91.3786	87.6471	95.4420	86.4242	745	105	691	33	27	81.8182
hfeng-pmm3	INDEL	I1_5	HG002compoundhet	hetalt	97.1381	94.4439	99.9906	55.8738	10556	621	10614	1	1	100.0000
hfeng-pmm3	INDEL	I1_5	HG002compoundhet	homalt	83.8462	99.3921	72.5055	83.0068	327	2	327	124	123	99.1935
hfeng-pmm3	INDEL	D6_15	HG002compoundhet	*	95.1894	92.4704	98.0731	32.6928	8351	680	8347	164	158	96.3415
hfeng-pmm3	INDEL	D6_15	HG002compoundhet	het	81.8478	78.8551	85.0765	66.7091	675	181	667	117	113	96.5812
hfeng-pmm3	INDEL	D6_15	HG002compoundhet	hetalt	96.8362	93.8781	99.9869	24.0528	7652	499	7656	1	0	0.0000
hfeng-pmm3	INDEL	D6_15	HG002compoundhet	homalt	51.0638	100.0000	34.2857	66.3462	24	0	24	46	45	97.8261
jmaeng-gatk	INDEL	C6_15	HG002compoundhet	*		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C6_15	HG002compoundhet	het		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C6_15	HG002compoundhet	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C6_15	HG002compoundhet	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	D16_PLUS	HG002compoundhet	*	94.6939	94.1478	95.2463	35.4713	2204	137	2204	110	109	99.0909
jmaeng-gatk	INDEL	D16_PLUS	HG002compoundhet	het	87.0277	99.2593	77.4799	58.6932	402	3	289	84	83	98.8095
jmaeng-gatk	INDEL	D16_PLUS	HG002compoundhet	hetalt	96.2053	93.0498	99.5822	25.8327	1794	134	1907	8	8	100.0000
jmaeng-gatk	INDEL	D16_PLUS	HG002compoundhet	homalt	47.0588	100.0000	30.7692	74.2574	8	0	8	18	18	100.0000
jmaeng-gatk	INDEL	C1_5	HG002compoundhet	*	0.0000	100.0000	0.0000	0.0000	1	0	0	0	0
jmaeng-gatk	INDEL	C1_5	HG002compoundhet	het		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C1_5	HG002compoundhet	hetalt	0.0000	100.0000	0.0000	0.0000	1	0	0	0	0
jmaeng-gatk	INDEL	C1_5	HG002compoundhet	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	*	HG002compoundhet	*	93.6190	92.3632	94.9094	62.9257	27672	2288	27556	1478	1464	99.0528
jmaeng-gatk	INDEL	*	HG002compoundhet	het	92.6044	97.8749	87.8724	79.5506	4007	87	3775	521	513	98.4645
jmaeng-gatk	INDEL	*	HG002compoundhet	hetalt	95.3319	91.2708	99.7711	50.5352	22982	2198	23098	53	53	100.0000
jmaeng-gatk	INDEL	*	HG002compoundhet	homalt	60.0968	99.5627	43.0372	84.8886	683	3	683	904	898	99.3363
jli-custom	SNP	ti	HG002compoundhet	*	99.7826	99.8112	99.7541	35.5495	17445	33	17445	43	22	51.1628
jli-custom	SNP	ti	HG002compoundhet	het	99.6793	99.7265	99.6321	39.4553	9479	26	9479	35	14	40.0000
jli-custom	SNP	ti	HG002compoundhet	hetalt	99.8270	99.6546	100.0000	22.4462	577	2	577	0	0
jli-custom	SNP	ti	HG002compoundhet	homalt	99.9121	99.9324	99.8918	30.7138	7389	5	7389	8	8	100.0000
jli-custom	SNP	tv	HG002compoundhet	*	99.6414	99.6526	99.6301	48.9851	8892	31	8889	33	14	42.4242
jli-custom	SNP	tv	HG002compoundhet	het	99.4759	99.5292	99.4226	55.0428	4651	22	4649	27	10	37.0370
jli-custom	SNP	tv	HG002compoundhet	hetalt	99.8839	99.7680	100.0000	23.0769	860	2	860	0	0
jli-custom	SNP	tv	HG002compoundhet	homalt	99.8081	99.7934	99.8228	43.2831	3381	7	3380	6	4	66.6667
jli-custom	SNP	*	HG002compoundhet	*	99.7328	99.7599	99.7058	41.1267	25760	62	25757	76	36	47.3684
jli-custom	SNP	*	HG002compoundhet	het	99.6122	99.6614	99.5631	45.6634	14130	48	14128	62	24	38.7097
jli-custom	SNP	*	HG002compoundhet	hetalt	99.8839	99.7680	100.0000	23.0769	860	2	860	0	0
jli-custom	SNP	*	HG002compoundhet	homalt	99.8794	99.8887	99.8702	35.2217	10770	12	10769	14	12	85.7143
jmaeng-gatk	INDEL	C16_PLUS	HG002compoundhet	*		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C16_PLUS	HG002compoundhet	het		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C16_PLUS	HG002compoundhet	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C16_PLUS	HG002compoundhet	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
jli-custom	INDEL	*	HG002compoundhet	*	95.6209	94.1822	97.1042	61.3856	28217	1743	28100	838	804	95.9427
jli-custom	INDEL	*	HG002compoundhet	het	95.0677	97.0689	93.1473	77.2493	3974	120	3738	275	245	89.0909
jli-custom	INDEL	*	HG002compoundhet	hetalt	96.5598	93.5624	99.7556	52.2097	23559	1621	23678	58	57	98.2759
jli-custom	INDEL	*	HG002compoundhet	homalt	72.9600	99.7085	57.5273	84.4270	684	2	684	505	502	99.4059
jlack-gatk	INDEL	I16_PLUS	HG002compoundhet	*	89.6882	87.2608	92.2546	52.5070	1870	273	1870	157	144	91.7197
jlack-gatk	INDEL	I16_PLUS	HG002compoundhet	het	61.9313	91.4894	46.8085	90.8382	43	4	22	25	17	68.0000
jlack-gatk	INDEL	I16_PLUS	HG002compoundhet	hetalt	93.0151	87.1476	99.7297	45.3148	1824	269	1845	5	4	80.0000
jlack-gatk	INDEL	I16_PLUS	HG002compoundhet	homalt	4.5113	100.0000	2.3077	65.0538	3	0	3	127	123	96.8504
jlack-gatk	INDEL	I1_5	HG002compoundhet	*	93.1060	91.1379	95.1609	67.4017	11261	1095	11268	573	557	97.2077
jlack-gatk	INDEL	I1_5	HG002compoundhet	het	90.5365	97.8824	84.2162	85.4468	832	18	779	146	134	91.7808

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