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Explore HG002 comparison results
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EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
78051-78100 / 86044 show all
ckim-gatkINDELI6_15HG002compoundhethetalt
95.9864
92.3041
99.9748
28.2337
7880657792122
100.0000
ckim-gatkINDELI6_15HG002compoundhethomalt
18.5075
100.0000
10.1974
63.1068
31031273272
99.6337
ckim-gatkINDELD16_PLUSHG002compoundhet*
95.5256
95.3012
95.7511
35.3496
223111022319996
96.9697
ckim-gatkINDELD16_PLUSHG002compoundhethet
88.7912
99.7531
80.0000
59.4286
40412847168
95.7746
ckim-gatkINDELD16_PLUSHG002compoundhethetalt
96.8969
94.3465
99.5891
25.8850
1819109193988
100.0000
ckim-gatkINDELD16_PLUSHG002compoundhethomalt
44.4444
100.0000
28.5714
72.5490
8082020
100.0000
ckim-gatkINDELD1_5HG002compoundhet*
95.9834
94.5321
97.4800
66.2715
1156666911566299296
98.9967
ckim-gatkINDELD1_5HG002compoundhethet
96.2104
98.4375
94.0819
78.9081
1701271701107105
98.1308
ckim-gatkINDELD1_5HG002compoundhethetalt
96.5709
93.7255
99.5943
58.2762
957564195753939
100.0000
ckim-gatkINDELD1_5HG002compoundhethomalt
79.0191
99.6564
65.4628
87.5701
2901290153152
99.3464
ckim-gatkSNPtiHG002compoundhet*
99.4312
99.0159
99.8500
36.2044
17306172173062621
80.7692
ckim-gatkSNPtiHG002compoundhethet
99.4351
99.0847
99.7881
40.5181
94188794182015
75.0000
ckim-gatkSNPtiHG002compoundhethetalt
98.8646
97.7547
100.0000
22.2527
5661356600
ckim-gatkSNPtiHG002compoundhethomalt
99.4702
99.0262
99.9181
30.6914
732272732266
100.0000
ckim-gatkINDELI1_5HG002compoundhet*
94.8213
92.3843
97.3904
66.1548
1141594111420306304
99.3464
ckim-gatkINDELI1_5HG002compoundhethet
95.1264
98.8235
91.6959
86.6176
840107847169
97.1831
ckim-gatkINDELI1_5HG002compoundhethetalt
95.6413
91.6793
99.9612
55.8202
102479301030844
100.0000
ckim-gatkINDELI1_5HG002compoundhethomalt
73.8739
99.6960
58.6762
88.6290
3281328231231
100.0000
ckim-gatkINDELD6_15HG002compoundhet*
95.5310
94.8178
96.2551
36.1757
85634688559333330
99.0991
ckim-gatkINDELD6_15HG002compoundhethet
90.0227
98.3645
82.9851
68.6916
84214834171169
98.8304
ckim-gatkINDELD6_15HG002compoundhethetalt
96.9335
94.4301
99.5733
24.1244
769745477013333
100.0000
ckim-gatkINDELD6_15HG002compoundhethomalt
27.1186
100.0000
15.6863
71.0775
24024129128
99.2248
ckim-gatkINDELI16_PLUSHG002compoundhet*
94.2299
92.2072
96.3432
52.0122
197616719767575
100.0000
ckim-gatkINDELI16_PLUSHG002compoundhethet
85.1501
95.7447
76.6667
93.8017
4522377
100.0000
ckim-gatkINDELI16_PLUSHG002compoundhethetalt
95.8494
92.1166
99.8975
44.7808
1928165195022
100.0000
ckim-gatkINDELI16_PLUSHG002compoundhethomalt
8.3333
100.0000
4.3478
72.9412
3036666
100.0000
ckim-gatkSNP*HG002compoundhet*
99.3973
99.0009
99.7970
41.7198
25564258255615238
73.0769
ckim-gatkSNP*HG002compoundhethet
99.3772
99.0478
99.7088
46.6510
14043135140414128
68.2927
ckim-gatkSNP*HG002compoundhethetalt
98.8856
97.7958
100.0000
22.8728
8431984300
ckim-gatkSNP*HG002compoundhethomalt
99.4644
99.0354
99.8971
35.0629
10678104106771110
90.9091
hfeng-pmm3INDELI6_15HG002compoundhet*
95.0754
92.8327
97.4292
36.3885
81476298148215212
98.6047
hfeng-pmm3INDELI6_15HG002compoundhethet
81.1158
79.8077
82.4675
86.8038
166421272725
92.5926
hfeng-pmm3INDELI6_15HG002compoundhethetalt
96.4396
93.1240
100.0000
29.8754
7950587799000
hfeng-pmm3INDELI6_15HG002compoundhethomalt
24.8000
100.0000
14.1553
62.6280
31031188187
99.4681
hfeng-pmm3INDELD1_5HG002compoundhet*
95.5863
92.3089
99.1049
60.5859
112949411129310295
93.1373
hfeng-pmm3INDELD1_5HG002compoundhethet
87.8989
80.4977
96.7989
73.8775
139133713914642
91.3043
hfeng-pmm3INDELD1_5HG002compoundhethetalt
96.9544
94.1073
99.9792
56.3965
9614602961320
0.0000
hfeng-pmm3INDELD1_5HG002compoundhethomalt
91.1672
99.3127
84.2566
74.7609
28922895453
98.1481
hfeng-pmm3SNP*HG002compoundhet*
97.8284
95.8679
99.8709
39.6499
247551067247553215
46.8750
hfeng-pmm3SNP*HG002compoundhethet
96.0659
92.5730
99.8327
43.9121
13125105313125225
22.7273
hfeng-pmm3SNP*HG002compoundhethetalt
99.8839
99.7680
100.0000
22.8700
860286000
hfeng-pmm3SNP*HG002compoundhethomalt
99.8980
99.8887
99.9072
34.7339
1077012107701010
100.0000
hfeng-pmm3SNPtiHG002compoundhet*
98.2879
96.7330
99.8937
34.5867
1690757116909188
44.4444
hfeng-pmm3SNPtiHG002compoundhethet
96.8798
94.0768
99.8549
38.2659
89425638944133
23.0769
hfeng-pmm3SNPtiHG002compoundhethetalt
99.8270
99.6546
100.0000
22.4462
577257700
hfeng-pmm3SNPtiHG002compoundhethomalt
99.9256
99.9189
99.9324
30.4123
73886738855
100.0000
hfeng-pmm3INDELI16_PLUSHG002compoundhet*
95.0875
92.5805
97.7340
52.1790
198415919844645
97.8261
hfeng-pmm3INDELI16_PLUSHG002compoundhethet
91.1593
87.2340
95.4545
94.5679
4162111
100.0000
hfeng-pmm3INDELI16_PLUSHG002compoundhethetalt
96.1827
92.6899
99.9490
46.0226
1940153196011
100.0000
hfeng-pmm3INDELI16_PLUSHG002compoundhethomalt
12.0000
100.0000
6.3830
77.2947
3034443
97.7273