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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1555 1556 1557 1558 1559 1560 1561 1562 1563 ... 1720 1721 » 77901-77950 / 86044 show all
ckim-dragen	SNP	*	HG002compoundhet	*	99.7929	99.7831	99.8027	41.5217	25766	56	25804	51	26	50.9804
ckim-dragen	SNP	*	HG002compoundhet	het	99.7322	99.6967	99.7677	46.4046	14135	43	14173	33	8	24.2424
ckim-dragen	SNP	*	HG002compoundhet	hetalt	99.8839	99.7680	100.0000	22.0308	860	2	860	0	0
ckim-dragen	SNP	*	HG002compoundhet	homalt	99.8656	99.8980	99.8332	35.0217	10771	11	10771	18	18	100.0000
ckim-gatk	INDEL	C6_15	HG002compoundhet	*		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-gatk	INDEL	C6_15	HG002compoundhet	het		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-gatk	INDEL	C6_15	HG002compoundhet	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-gatk	INDEL	C6_15	HG002compoundhet	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-dragen	SNP	tv	HG002compoundhet	*	99.7984	99.7422	99.8546	49.3913	8900	23	8925	13	8	61.5385
ckim-dragen	SNP	tv	HG002compoundhet	het	99.7327	99.6362	99.8294	55.7255	4656	17	4682	8	3	37.5000
ckim-dragen	SNP	tv	HG002compoundhet	hetalt	99.8839	99.7680	100.0000	22.0308	860	2	860	0	0
ckim-dragen	SNP	tv	HG002compoundhet	homalt	99.8672	99.8819	99.8524	43.2020	3384	4	3383	5	5	100.0000
ckim-dragen	SNP	ti	HG002compoundhet	*	99.7941	99.8055	99.7828	35.8899	17444	34	17457	38	18	47.3684
ckim-dragen	SNP	ti	HG002compoundhet	het	99.7319	99.7265	99.7373	40.1998	9479	26	9491	25	5	20.0000
ckim-dragen	SNP	ti	HG002compoundhet	hetalt	99.9136	99.8273	100.0000	21.5739	578	1	578	0	0
ckim-dragen	SNP	ti	HG002compoundhet	homalt	99.8648	99.9053	99.8243	30.4352	7387	7	7388	13	13	100.0000
ckim-gatk	INDEL	*	HG002compoundhet	*	93.9895	92.8338	95.1743	62.6651	27813	2147	27690	1404	1391	99.0741
ckim-gatk	INDEL	*	HG002compoundhet	het	93.4586	98.5589	88.8602	79.6039	4035	59	3789	475	465	97.8947
ckim-gatk	INDEL	*	HG002compoundhet	hetalt	95.5666	91.7156	99.7551	50.3022	23094	2086	23217	57	57	100.0000
ckim-gatk	INDEL	*	HG002compoundhet	homalt	61.0169	99.7085	43.9589	84.7301	684	2	684	872	869	99.6560
ckim-gatk	INDEL	C1_5	HG002compoundhet	*	0.0000	100.0000	0.0000	0.0000	1	0	0	0	0
ckim-gatk	INDEL	C1_5	HG002compoundhet	het		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-gatk	INDEL	C1_5	HG002compoundhet	hetalt	0.0000	100.0000	0.0000	0.0000	1	0	0	0	0
ckim-gatk	INDEL	C1_5	HG002compoundhet	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	D16_PLUS	HG002compoundhet	*	81.7142	76.1213	88.1941	27.9899	1782	559	1763	236	205	86.8644
ckim-isaac	INDEL	D16_PLUS	HG002compoundhet	het	48.4816	76.0494	35.5828	39.9632	308	97	116	210	182	86.6667
ckim-isaac	INDEL	D16_PLUS	HG002compoundhet	hetalt	86.1574	76.3485	98.8582	24.5694	1472	456	1645	19	17	89.4737
ckim-isaac	INDEL	D16_PLUS	HG002compoundhet	homalt	23.5294	25.0000	22.2222	66.6667	2	6	2	7	6	85.7143
ckim-gatk	SNP	tv	HG002compoundhet	*	99.2966	98.8905	99.7061	49.4688	8824	99	8821	26	17	65.3846
ckim-gatk	SNP	tv	HG002compoundhet	het	99.2595	98.9728	99.5478	55.8932	4625	48	4623	21	13	61.9048
ckim-gatk	SNP	tv	HG002compoundhet	hetalt	98.8856	97.7958	100.0000	22.8728	843	19	843	0	0
ckim-gatk	SNP	tv	HG002compoundhet	homalt	99.4517	99.0555	99.8512	42.9154	3356	32	3355	5	4	80.0000
ckim-isaac	INDEL	*	HG002compoundhet	*	82.5676	79.0154	86.4543	46.0363	23673	6287	22964	3598	3236	89.9389
ckim-isaac	INDEL	*	HG002compoundhet	het	56.9247	80.6302	43.9912	64.9439	3301	793	2405	3062	2738	89.4187
ckim-isaac	INDEL	*	HG002compoundhet	hetalt	88.0188	79.0747	99.2444	32.7152	19911	5269	20095	153	126	82.3529
ckim-isaac	INDEL	*	HG002compoundhet	homalt	60.3591	67.2012	54.7816	76.0328	461	225	464	383	372	97.1279
ckim-isaac	INDEL	D6_15	HG002compoundhet	*	87.3304	83.8888	91.0664	22.5432	7576	1455	7472	733	687	93.7244
ckim-isaac	INDEL	D6_15	HG002compoundhet	het	43.7639	83.8785	29.6053	44.9275	718	138	270	642	608	94.7040
ckim-isaac	INDEL	D6_15	HG002compoundhet	hetalt	90.9387	83.9774	99.1585	17.7185	6845	1306	7188	61	50	81.9672
ckim-isaac	INDEL	D6_15	HG002compoundhet	homalt	40.0881	54.1667	31.8182	65.3543	13	11	14	30	29	96.6667
ckim-isaac	INDEL	C6_15	HG002compoundhet	*		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C6_15	HG002compoundhet	het		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C6_15	HG002compoundhet	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C6_15	HG002compoundhet	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C16_PLUS	HG002compoundhet	*		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C16_PLUS	HG002compoundhet	het		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C16_PLUS	HG002compoundhet	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C16_PLUS	HG002compoundhet	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C1_5	HG002compoundhet	*	0.0000	100.0000	0.0000	0.0000	1	0	0	0	0
ckim-isaac	INDEL	C1_5	HG002compoundhet	het		0.0000	0.0000	0.0000	0	0	0	0	0

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