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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1552 1553 1554 1555 1556 1557 1558 1559 1560 ... 1720 1721 » 77751-77800 / 86044 show all
dgrover-gatk	INDEL	D16_PLUS	HG002compoundhet	hetalt	97.0887	94.7095	99.5904	26.5237	1826	102	1945	8	8	100.0000
dgrover-gatk	INDEL	D16_PLUS	HG002compoundhet	homalt	44.4444	100.0000	28.5714	72.0000	8	0	8	20	20	100.0000
dgrover-gatk	INDEL	C16_PLUS	HG002compoundhet	*		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	C16_PLUS	HG002compoundhet	het		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	C16_PLUS	HG002compoundhet	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	C16_PLUS	HG002compoundhet	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-vqsr	SNP	tv	HG002compoundhet	*	98.8066	97.8931	99.7373	49.7301	8735	188	8732	23	15	65.2174
ckim-vqsr	SNP	tv	HG002compoundhet	het	99.1184	98.6518	99.5894	55.9836	4610	63	4608	19	12	63.1579
ckim-vqsr	SNP	tv	HG002compoundhet	hetalt	97.5030	95.1276	100.0000	23.3645	820	42	820	0	0
ckim-vqsr	SNP	tv	HG002compoundhet	homalt	98.7009	97.5502	99.8791	43.2979	3305	83	3304	4	3	75.0000
dgrover-gatk	INDEL	*	HG002compoundhet	*	95.1627	94.9733	95.3528	63.3096	28454	1506	28336	1381	1370	99.2035
dgrover-gatk	INDEL	*	HG002compoundhet	het	93.5069	98.4612	89.0273	79.7555	4031	63	3789	467	459	98.2869
dgrover-gatk	INDEL	*	HG002compoundhet	hetalt	96.9439	94.2772	99.7659	51.7927	23739	1441	23863	56	55	98.2143
dgrover-gatk	INDEL	*	HG002compoundhet	homalt	61.4004	99.7085	44.3580	85.1072	684	2	684	858	856	99.7669
dgrover-gatk	INDEL	C6_15	HG002compoundhet	*		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	C6_15	HG002compoundhet	het		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	C6_15	HG002compoundhet	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	C6_15	HG002compoundhet	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-vqsr	INDEL	I16_PLUS	HG002compoundhet	*	94.1794	92.1139	96.3397	52.0365	1974	169	1974	75	75	100.0000
ckim-vqsr	INDEL	I16_PLUS	HG002compoundhet	het	85.1501	95.7447	76.6667	93.8017	45	2	23	7	7	100.0000
ckim-vqsr	INDEL	I16_PLUS	HG002compoundhet	hetalt	95.7976	92.0210	99.8974	44.8061	1926	167	1948	2	2	100.0000
ckim-vqsr	INDEL	I16_PLUS	HG002compoundhet	homalt	8.3333	100.0000	4.3478	72.9412	3	0	3	66	66	100.0000
ckim-vqsr	INDEL	C1_5	HG002compoundhet	*	0.0000	100.0000	0.0000	0.0000	1	0	0	0	0
ckim-vqsr	INDEL	C1_5	HG002compoundhet	het		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-vqsr	INDEL	C1_5	HG002compoundhet	hetalt	0.0000	100.0000	0.0000	0.0000	1	0	0	0	0
ckim-vqsr	INDEL	C1_5	HG002compoundhet	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-vqsr	INDEL	C6_15	HG002compoundhet	*		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-vqsr	INDEL	C6_15	HG002compoundhet	het		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-vqsr	INDEL	C6_15	HG002compoundhet	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-vqsr	INDEL	C6_15	HG002compoundhet	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-vqsr	INDEL	I6_15	HG002compoundhet	*	94.2580	92.3997	96.1926	36.2881	8109	667	8110	321	319	99.3769
ckim-vqsr	INDEL	I6_15	HG002compoundhet	het	86.6987	97.5962	77.9904	84.7889	203	5	163	46	45	97.8261
ckim-vqsr	INDEL	I6_15	HG002compoundhet	hetalt	95.9547	92.2455	99.9747	28.2465	7875	662	7916	2	2	100.0000
ckim-vqsr	INDEL	I6_15	HG002compoundhet	homalt	18.5075	100.0000	10.1974	63.1068	31	0	31	273	272	99.6337
ckim-vqsr	INDEL	D6_15	HG002compoundhet	*	95.5291	94.7736	96.2967	36.1965	8559	472	8555	329	326	99.0881
ckim-vqsr	INDEL	D6_15	HG002compoundhet	het	89.9917	98.0140	83.1832	68.8202	839	17	831	168	166	98.8095
ckim-vqsr	INDEL	D6_15	HG002compoundhet	hetalt	96.9271	94.4179	99.5733	24.1268	7696	455	7700	33	33	100.0000
ckim-vqsr	INDEL	D6_15	HG002compoundhet	homalt	27.2727	100.0000	15.7895	71.2121	24	0	24	128	127	99.2188
ckim-vqsr	INDEL	D16_PLUS	HG002compoundhet	*	95.5217	95.2157	95.8298	35.3889	2229	112	2229	97	95	97.9381
ckim-vqsr	INDEL	D16_PLUS	HG002compoundhet	het	88.8043	99.2593	80.3419	59.7015	402	3	282	69	67	97.1014
ckim-vqsr	INDEL	D16_PLUS	HG002compoundhet	hetalt	96.8969	94.3465	99.5891	25.8850	1819	109	1939	8	8	100.0000
ckim-vqsr	INDEL	D16_PLUS	HG002compoundhet	homalt	44.4444	100.0000	28.5714	72.5490	8	0	8	20	20	100.0000
ckim-vqsr	INDEL	D1_5	HG002compoundhet	*	95.9661	94.4994	97.4791	66.2791	11562	673	11562	299	296	98.9967
ckim-vqsr	INDEL	D1_5	HG002compoundhet	het	96.1223	98.2639	94.0720	78.9357	1698	30	1698	107	105	98.1308
ckim-vqsr	INDEL	D1_5	HG002compoundhet	hetalt	96.5656	93.7157	99.5943	58.2787	9574	642	9574	39	39	100.0000
ckim-vqsr	INDEL	D1_5	HG002compoundhet	homalt	79.0191	99.6564	65.4628	87.5701	290	1	290	153	152	99.3464
ckim-vqsr	INDEL	I1_5	HG002compoundhet	*	94.7676	92.2629	97.4120	66.1892	11400	956	11405	303	301	99.3399
ckim-vqsr	INDEL	I1_5	HG002compoundhet	het	94.8823	98.1176	91.8536	86.7262	834	16	778	69	67	97.1014
ckim-vqsr	INDEL	I1_5	HG002compoundhet	hetalt	95.5975	91.5988	99.9612	55.8418	10238	939	10299	4	4	100.0000
ckim-vqsr	INDEL	I1_5	HG002compoundhet	homalt	73.9572	99.6960	58.7814	88.6470	328	1	328	230	230	100.0000

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