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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1551 1552 1553 1554 1555 1556 1557 1558 1559 ... 1720 1721 » 77701-77750 / 86044 show all
egarrison-hhga	INDEL	C6_15	HG002compoundhet	*		0.0000	0.0000	91.3043	0	0	0	2	0	0.0000
egarrison-hhga	INDEL	C6_15	HG002compoundhet	het		0.0000	0.0000	71.4286	0	0	0	2	0	0.0000
egarrison-hhga	INDEL	C6_15	HG002compoundhet	hetalt		0.0000		100.0000	0	0	0	0	0
egarrison-hhga	INDEL	C6_15	HG002compoundhet	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	SNP	ti	HG002compoundhet	*	99.8369	99.8284	99.8455	35.6925	17448	30	17446	27	21	77.7778
dgrover-gatk	SNP	ti	HG002compoundhet	het	99.7790	99.7685	99.7895	39.8442	9483	22	9481	20	14	70.0000
dgrover-gatk	SNP	ti	HG002compoundhet	hetalt	99.8270	99.6546	100.0000	22.2372	577	2	577	0	0
dgrover-gatk	SNP	ti	HG002compoundhet	homalt	99.9121	99.9189	99.9053	30.4654	7388	6	7388	7	7	100.0000
dgrover-gatk	SNP	tv	HG002compoundhet	*	99.7478	99.7647	99.7310	49.0520	8902	21	8897	24	15	62.5000
dgrover-gatk	SNP	tv	HG002compoundhet	het	99.6470	99.6790	99.6151	55.4242	4658	15	4658	18	10	55.5556
dgrover-gatk	SNP	tv	HG002compoundhet	hetalt	99.8257	99.6520	100.0000	22.7518	859	3	859	0	0
dgrover-gatk	SNP	tv	HG002compoundhet	homalt	99.8671	99.9115	99.8228	42.6879	3385	3	3380	6	5	83.3333
dgrover-gatk	SNP	*	HG002compoundhet	*	99.8063	99.8102	99.8025	41.2435	25773	49	25766	51	36	70.5882
dgrover-gatk	SNP	*	HG002compoundhet	het	99.7355	99.7390	99.7320	46.0622	14141	37	14139	38	24	63.1579
dgrover-gatk	SNP	*	HG002compoundhet	hetalt	99.8257	99.6520	100.0000	22.7518	859	3	859	0	0
dgrover-gatk	SNP	*	HG002compoundhet	homalt	99.8980	99.9165	99.8794	34.8304	10773	9	10768	13	12	92.3077
dgrover-gatk	INDEL	I6_15	HG002compoundhet	*	94.9104	93.5962	96.2620	37.4707	8214	562	8215	319	317	99.3730
dgrover-gatk	INDEL	I6_15	HG002compoundhet	het	86.2668	98.0769	76.9953	84.5091	204	4	164	49	48	97.9592
dgrover-gatk	INDEL	I6_15	HG002compoundhet	hetalt	96.6156	93.4637	99.9875	29.8618	7979	558	8020	1	1	100.0000
dgrover-gatk	INDEL	I6_15	HG002compoundhet	homalt	18.7311	100.0000	10.3333	64.1577	31	0	31	269	268	99.6283
dgrover-gatk	INDEL	I16_PLUS	HG002compoundhet	*	94.7743	93.0938	96.5167	53.0120	1995	148	1995	72	72	100.0000
dgrover-gatk	INDEL	I16_PLUS	HG002compoundhet	het	85.1501	95.7447	76.6667	93.8650	45	2	23	7	7	100.0000
dgrover-gatk	INDEL	I16_PLUS	HG002compoundhet	hetalt	96.3626	93.0244	99.9492	46.0126	1947	146	1969	1	1	100.0000
dgrover-gatk	INDEL	I16_PLUS	HG002compoundhet	homalt	8.5714	100.0000	4.4776	74.3295	3	0	3	64	64	100.0000
dgrover-gatk	INDEL	I1_5	HG002compoundhet	*	96.3058	95.1360	97.5048	66.8717	11755	601	11762	301	300	99.6678
dgrover-gatk	INDEL	I1_5	HG002compoundhet	het	95.2481	98.5882	92.1269	86.8653	838	12	784	67	66	98.5075
dgrover-gatk	INDEL	I1_5	HG002compoundhet	hetalt	97.2852	94.7392	99.9718	57.2014	10589	588	10650	3	3	100.0000
dgrover-gatk	INDEL	I1_5	HG002compoundhet	homalt	73.8739	99.6960	58.6762	88.9153	328	1	328	231	231	100.0000
dgrover-gatk	INDEL	D1_5	HG002compoundhet	*	96.6517	95.7826	97.5368	66.6083	11719	516	11721	296	293	98.9865
dgrover-gatk	INDEL	D1_5	HG002compoundhet	het	96.0763	98.4375	93.8258	79.0071	1701	27	1702	112	111	99.1071
dgrover-gatk	INDEL	D1_5	HG002compoundhet	hetalt	97.3579	95.2232	99.5905	58.8743	9728	488	9729	40	39	97.5000
dgrover-gatk	INDEL	D1_5	HG002compoundhet	homalt	80.0000	99.6564	66.8203	87.9210	290	1	290	144	143	99.3056
dgrover-gatk	INDEL	D6_15	HG002compoundhet	*	95.8086	95.3161	96.3062	36.3267	8608	423	8604	330	327	99.0909
dgrover-gatk	INDEL	D6_15	HG002compoundhet	het	90.2073	98.2477	83.3834	68.6441	841	15	833	166	164	98.7952
dgrover-gatk	INDEL	D6_15	HG002compoundhet	hetalt	97.2251	94.9945	99.5630	24.6392	7743	408	7747	34	33	97.0588
dgrover-gatk	INDEL	D6_15	HG002compoundhet	homalt	26.9663	100.0000	15.5844	70.3846	24	0	24	130	130	100.0000
dgrover-gatk	INDEL	C1_5	HG002compoundhet	*	0.0000	100.0000	0.0000	0.0000	1	0	0	0	0
dgrover-gatk	INDEL	C1_5	HG002compoundhet	het		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	C1_5	HG002compoundhet	hetalt	0.0000	100.0000	0.0000	0.0000	1	0	0	0	0
dgrover-gatk	INDEL	C1_5	HG002compoundhet	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-vqsr	SNP	*	HG002compoundhet	*	98.9056	97.9940	99.8343	41.9777	25304	518	25301	42	32	76.1905
ckim-vqsr	SNP	*	HG002compoundhet	het	99.1735	98.5964	99.7573	46.7768	13979	199	13977	34	25	73.5294
ckim-vqsr	SNP	*	HG002compoundhet	hetalt	97.5030	95.1276	100.0000	23.3645	820	42	820	0	0
ckim-vqsr	SNP	*	HG002compoundhet	homalt	98.6617	97.4309	99.9239	35.4419	10505	277	10504	8	7	87.5000
ckim-vqsr	SNP	ti	HG002compoundhet	*	98.9109	97.9517	99.8891	36.4634	17120	358	17120	19	17	89.4737
ckim-vqsr	SNP	ti	HG002compoundhet	het	99.2006	98.5692	99.8402	40.6564	9369	136	9369	15	13	86.6667
ckim-vqsr	SNP	ti	HG002compoundhet	hetalt	97.5221	95.1641	100.0000	22.7209	551	28	551	0	0
ckim-vqsr	SNP	ti	HG002compoundhet	homalt	98.6436	97.3763	99.9445	31.0556	7200	194	7200	4	4	100.0000
dgrover-gatk	INDEL	D16_PLUS	HG002compoundhet	*	95.7397	95.5147	95.9657	35.4749	2236	105	2236	94	91	96.8085
dgrover-gatk	INDEL	D16_PLUS	HG002compoundhet	het	89.2587	99.2593	81.0888	59.0856	402	3	283	66	63	95.4545

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