PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
77251-77300 / 86044 show all
gduggal-bwavardINDELI6_15HG002compoundhethetalt
0.0000
0.1406
0.0000
0.0000
128525000
gduggal-bwavardINDELI6_15HG002compoundhethomalt
46.3972
38.7097
57.8947
75.6410
12191188
100.0000
gduggal-bwavardINDELD6_15HG002compoundhet*
10.9462
9.3899
13.1210
37.7051
848818383255095456
99.0379
gduggal-bwavardINDELD6_15HG002compoundhethet
22.7477
94.6262
12.9278
37.5915
8104681654965446
99.0902
gduggal-bwavardINDELD6_15HG002compoundhethetalt
0.0000
0.2576
0.0000
0.0000
218130000
gduggal-bwavardINDELD6_15HG002compoundhethomalt
62.0296
70.8333
55.1724
55.3846
177161310
76.9231
gduggal-bwavardINDELC6_15HG002compoundhet*
0.0000
0.0000
27.1429
91.0026
00195123
45.0980
gduggal-bwavardINDELC6_15HG002compoundhethet
0.0000
0.0000
26.8657
91.2189
00184921
42.8571
gduggal-bwavardINDELC6_15HG002compoundhethetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDELC6_15HG002compoundhethomalt
0.0000
0.0000
33.3333
80.0000
00122
100.0000
gduggal-bwavardINDELD1_5HG002compoundhet*
18.6118
15.4230
23.4630
68.0839
188710348178658265576
95.7089
gduggal-bwavardINDELD1_5HG002compoundhethet
34.5608
92.4769
21.2515
68.3690
1598130156958145564
95.7000
gduggal-bwavardINDELD1_5HG002compoundhethetalt
0.0000
0.3622
0.0000
0.0000
3710179000
gduggal-bwavardINDELD1_5HG002compoundhethomalt
90.4952
86.5979
94.7598
55.0098
252392171212
100.0000
gduggal-bwafbINDELC1_5HG002compoundhet*
100.0000
100.0000
100.0000
93.7500
10100
gduggal-bwafbINDELC1_5HG002compoundhethet
0.0000
100.0000
00000
gduggal-bwafbINDELC1_5HG002compoundhethetalt
100.0000
100.0000
100.0000
90.0000
10100
gduggal-bwafbINDELC1_5HG002compoundhethomalt
0.0000
100.0000
00000
eyeh-varpipeSNP*HG002compoundhet*
97.2195
99.1054
95.4041
44.2893
2559123116939816176
21.5686
eyeh-varpipeSNP*HG002compoundhethet
94.4229
98.7586
90.4519
56.9085
14002176584561793
15.0729
eyeh-varpipeSNP*HG002compoundhethetalt
99.9219
99.8840
99.9599
21.9998
8611747832
66.6667
eyeh-varpipeSNP*HG002compoundhethomalt
97.1233
99.4992
94.8583
47.6589
1072854361619681
41.3265
gduggal-bwafbINDELD16_PLUSHG002compoundhet*
82.3584
75.6514
90.3704
28.6893
17715701952208208
100.0000
gduggal-bwafbINDELD16_PLUSHG002compoundhethet
83.1185
71.8519
98.5755
24.7427
29111417302525
100.0000
gduggal-bwafbINDELD16_PLUSHG002compoundhethetalt
86.2756
76.4004
99.0826
35.1190
147345521622
100.0000
gduggal-bwafbINDELD16_PLUSHG002compoundhethomalt
6.1901
87.5000
3.2086
48.1994
716181181
100.0000
gduggal-bwafbINDELC16_PLUSHG002compoundhet*
0.0000
0.0000
0.0000
00000
gduggal-bwafbINDELC16_PLUSHG002compoundhethet
0.0000
0.0000
0.0000
00000
gduggal-bwafbINDELC16_PLUSHG002compoundhethetalt
0.0000
0.0000
0.0000
00000
gduggal-bwafbINDELC16_PLUSHG002compoundhethomalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeSNPtiHG002compoundhet*
97.7572
99.1589
96.3946
39.7398
1733114712860481101
20.9979
eyeh-varpipeSNPtiHG002compoundhethet
95.2908
98.8427
91.9853
54.7039
9395110401735050
14.2857
eyeh-varpipeSNPtiHG002compoundhethetalt
99.8980
99.8273
99.9687
18.5958
5781639821
50.0000
eyeh-varpipeSNPtiHG002compoundhethomalt
97.1981
99.5131
94.9883
44.4780
735836244512950
38.7597
eyeh-varpipeSNPtvHG002compoundhet*
97.1567
99.0474
95.3368
45.3099
883885717635178
22.2222
eyeh-varpipeSNPtvHG002compoundhethet
92.5346
98.5876
87.1819
61.1401
460766188427744
15.8845
eyeh-varpipeSNPtvHG002compoundhethetalt
99.9052
99.8840
99.9265
25.0046
8611407932
66.6667
eyeh-varpipeSNPtvHG002compoundhethomalt
96.9051
99.4687
94.4704
53.4614
33701812137132
45.0704
gduggal-bwafbINDEL*HG002compoundhet*
86.4141
81.5955
91.8376
53.1940
2444655143787233663207
95.2763
gduggal-bwafbINDEL*HG002compoundhethet
91.2904
85.5154
97.9020
36.8528
350159330518654528
80.7339
gduggal-bwafbINDEL*HG002compoundhethetalt
88.3144
80.5679
97.7090
73.4740
2028748936696157155
98.7261
gduggal-bwafbINDEL*HG002compoundhethomalt
33.7522
95.9184
20.4793
75.1027
6582865825552524
98.7867
gduggal-bwafbINDELC6_15HG002compoundhet*
0.0000
0.0000
97.5000
00020
0.0000
gduggal-bwafbINDELC6_15HG002compoundhethet
0.0000
0.0000
96.1538
00010
0.0000
gduggal-bwafbINDELC6_15HG002compoundhethetalt
0.0000
0.0000
97.9592
00010
0.0000
gduggal-bwafbINDELC6_15HG002compoundhethomalt
0.0000
100.0000
00000
gduggal-snapfbINDELI6_15HG002compoundhet*
66.9443
57.2812
80.5291
25.2164
50273749584414131393
98.5846
gduggal-snapfbINDELI6_15HG002compoundhethet
56.6000
41.8269
87.5070
19.0965
871214686669652
97.4589
gduggal-snapfbINDELI6_15HG002compoundhethetalt
70.7588
57.7252
91.3944
38.7805
492836091147108105
97.2222
gduggal-snapfbINDELI6_15HG002compoundhethomalt
3.2572
38.7097
1.7002
37.4879
121911636636
100.0000