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Explore HG002 comparison results

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Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1521 1522 1523 1524 1525 1526 1527 1528 1529 ... 1720 1721 » 76201-76250 / 86044 show all
gduggal-snapvard	INDEL	D6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	34.3818	27.5134	45.8204	41.0718	1081	2848	1184	1400	1153	82.3571
gduggal-snapvard	INDEL	D6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	48.9137	52.6535	45.6699	40.6819	506	455	1176	1399	1152	82.3445
gduggal-snapvard	INDEL	D6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	0.0000	23.3728	0.0000	0.0000	553	1813	0	0	0
gduggal-snapvard	INDEL	D6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	7.0203	3.6545	88.8889	79.5455	22	580	8	1	1	100.0000
gduggal-snapvard	INDEL	C6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	0.0000	0.0000	17.3913	86.6667	0	0	16	76	11	14.4737
gduggal-snapvard	INDEL	C6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	0.0000	0.0000	16.6667	86.1751	0	0	15	75	11	14.6667
gduggal-snapvard	INDEL	C6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	0.0000	0.0000	50.0000	94.8718	0	0	1	1	0	0.0000
gduggal-snapvard	INDEL	D16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	3.5385	1.9267	21.6495	84.1374	41	2087	42	152	95	62.5000
gduggal-snapvard	INDEL	D16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	7.2121	4.3609	20.8333	84.0266	29	636	40	152	95	62.5000
gduggal-snapvard	INDEL	D16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	0.0000	1.0256	0.0000	0.0000	10	965	0	0	0
gduggal-snapvard	INDEL	D16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	0.8163	0.4098	100.0000	90.4762	2	486	2	0	0
gduggal-snapvard	INDEL	D1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	45.6100	45.3313	45.8922	57.7778	1806	2178	2860	3372	2355	69.8399
gduggal-snapvard	INDEL	D1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	55.6896	75.0355	44.2746	57.4199	1058	352	2664	3353	2340	69.7882
gduggal-snapvard	INDEL	D1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	0.0000	31.2294	0.0000	0.0000	569	1253	0	0	0
gduggal-snapvard	INDEL	D1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	37.7497	23.8032	91.1628	65.8188	179	573	196	19	15	78.9474
gduggal-snapvard	INDEL	I1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	49.8749	48.6428	51.1711	72.7940	896	946	1005	959	462	48.1752
gduggal-snapvard	INDEL	I1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	60.5053	81.8731	47.9826	72.9778	542	120	880	954	458	48.0084
gduggal-snapvard	INDEL	I1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	0.0000	25.4181	0.0000	0.0000	228	669	0	0	0
gduggal-snapvard	INDEL	I1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	60.8637	44.5230	96.1538	69.9074	126	157	125	5	4	80.0000
gduggal-snapplat	INDEL	D16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*		0.0000	0.0000	0.0000	0	2128	0	0	0
gduggal-snapplat	INDEL	D16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het		0.0000	0.0000	0.0000	0	665	0	0	0
gduggal-snapplat	INDEL	D16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	975	0	0	0
gduggal-snapplat	INDEL	D16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	488	0	0	0
gduggal-snapplat	INDEL	*	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	29.4305	22.6149	42.1263	81.2487	2278	7795	2734	3756	1082	28.8072
gduggal-snapplat	INDEL	*	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	27.4935	24.7277	30.9558	84.2395	999	3041	1276	2846	368	12.9304
gduggal-snapplat	INDEL	*	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	25.0124	14.6182	86.5625	67.4300	559	3265	554	86	66	76.7442
gduggal-snapplat	INDEL	*	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	40.1642	32.5939	52.3148	73.3785	720	1489	904	824	648	78.6408
gduggal-snapplat	INDEL	D6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	28.5833	18.1471	67.2691	61.6333	713	3216	670	326	173	53.0675
gduggal-snapplat	INDEL	D6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	23.8291	16.6493	41.8960	68.3446	160	801	137	190	58	30.5263
gduggal-snapplat	INDEL	D6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	26.5124	15.4269	94.2105	53.3742	365	2001	358	22	17	77.2727
gduggal-snapplat	INDEL	D6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	41.2069	31.2292	60.5536	61.3636	188	414	175	114	98	85.9649
gduggal-snapplat	INDEL	C6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapplat	INDEL	C6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapplat	INDEL	C6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapplat	INDEL	C6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapplat	INDEL	C16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapplat	INDEL	C16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapplat	INDEL	C16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapplat	INDEL	C16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapplat	INDEL	C1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
gduggal-snapplat	INDEL	C1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
gduggal-snapplat	INDEL	C1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt		0.0000		100.0000	0	0	0	0	0
gduggal-snapplat	INDEL	C1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapplat	INDEL	D1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	37.3916	32.4297	44.1462	77.4584	1292	2692	1776	2247	890	39.6084
gduggal-snapplat	INDEL	D1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	38.4337	40.5674	36.5133	81.1880	572	838	865	1504	300	19.9468
gduggal-snapplat	INDEL	D1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	28.9593	17.5631	82.4742	66.3778	320	1502	320	68	51	75.0000
gduggal-snapplat	INDEL	D1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	49.7249	53.1915	46.6825	69.1220	400	352	591	675	539	79.8519
ghariani-varprowl	INDEL	C1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*		0.0000	0.0000	0.0000	0	0	0	0	0
ghariani-varprowl	INDEL	C1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het		0.0000	0.0000	0.0000	0	0	0	0	0

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