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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1511 1512 1513 1514 1515 1516 1517 1518 1519 ... 1720 1721 » 75701-75750 / 86044 show all
dgrover-gatk	INDEL	*	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	94.9925	94.4604	95.5306	69.2327	9515	558	9362	438	390	89.0411
dgrover-gatk	INDEL	*	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	95.4266	96.8812	94.0151	79.6225	3914	126	3613	230	189	82.1739
dgrover-gatk	INDEL	*	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	94.0819	89.2259	99.4969	40.1872	3412	412	3560	18	17	94.4444
dgrover-gatk	INDEL	*	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	95.4228	99.0946	92.0135	66.0676	2189	20	2189	190	184	96.8421
dgrover-gatk	INDEL	C6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	C6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	C6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	C6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-vqsr	SNP	ti	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	99.1194	98.7685	99.4729	66.0097	3208	40	3208	17	8	47.0588
ckim-vqsr	SNP	ti	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	98.9599	98.7154	99.2056	68.9820	1998	26	1998	16	7	43.7500
ckim-vqsr	SNP	ti	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	SNP	ti	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	99.3840	98.8562	99.9174	59.5119	1210	14	1210	1	1	100.0000
ckim-vqsr	SNP	tv	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	99.1719	98.7467	99.6008	69.5995	1497	19	1497	6	2	33.3333
ckim-vqsr	SNP	tv	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	98.8343	98.2863	99.3884	71.8022	975	17	975	6	2	33.3333
ckim-vqsr	SNP	tv	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	SNP	tv	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	99.8088	99.6183	100.0000	64.2221	522	2	522	0	0
dgrover-gatk	INDEL	C1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	C1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	C1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	C1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
egarrison-hhga	INDEL	D6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	73.4644	67.6763	80.3352	54.3953	2659	1270	2684	657	598	91.0198
egarrison-hhga	INDEL	D6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	75.6717	93.2362	63.6760	61.7128	896	65	1022	583	558	95.7118
egarrison-hhga	INDEL	D6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	67.1562	50.9721	98.3986	41.3667	1206	1160	1106	18	15	83.3333
egarrison-hhga	INDEL	D6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	91.6796	92.5249	90.8497	49.7124	557	45	556	56	25	44.6429
egarrison-hhga	INDEL	I16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	79.6791	72.3301	88.6905	83.5616	149	57	149	19	11	57.8947
egarrison-hhga	INDEL	I16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	84.3305	80.0000	89.1566	86.2583	76	19	74	9	4	44.4444
egarrison-hhga	INDEL	I16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	72.8872	59.3023	94.5455	73.4300	51	35	52	3	2	66.6667
egarrison-hhga	INDEL	I16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	81.9433	88.0000	76.6667	85.7820	22	3	23	7	5	71.4286
egarrison-hhga	INDEL	D1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	79.7819	78.2631	81.3608	56.9182	3118	866	3121	715	658	92.0280
egarrison-hhga	INDEL	D1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	79.5694	95.6738	68.1055	61.1370	1349	61	1420	665	621	93.3835
egarrison-hhga	INDEL	D1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	73.4050	58.5620	98.3268	40.8270	1067	755	999	17	15	88.2353
egarrison-hhga	INDEL	D1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	94.4183	93.3511	95.5102	59.6597	702	50	702	33	22	66.6667
egarrison-hhga	INDEL	*	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	80.4994	78.7352	82.3445	83.8017	7931	2142	8036	1723	1538	89.2629
egarrison-hhga	INDEL	*	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	80.6539	91.2376	72.2705	67.9116	3686	354	3912	1501	1377	91.7388
egarrison-hhga	INDEL	*	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	72.8990	58.1328	97.7209	46.5971	2223	1601	2101	49	43	87.7551
egarrison-hhga	INDEL	*	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	91.8274	91.5346	92.1220	61.6285	2022	187	2023	173	118	68.2081
egarrison-hhga	INDEL	C1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
egarrison-hhga	INDEL	C1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het		0.0000	0.0000	0.0000	0	0	0	0	0
egarrison-hhga	INDEL	C1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt		0.0000		100.0000	0	0	0	0	0
egarrison-hhga	INDEL	C1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
egarrison-hhga	INDEL	C6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
egarrison-hhga	INDEL	C6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
egarrison-hhga	INDEL	C6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt		0.0000		100.0000	0	0	0	0	0
egarrison-hhga	INDEL	C6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
egarrison-hhga	INDEL	D16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	74.4984	65.6955	86.0254	69.2922	1398	730	1422	231	214	92.6407
egarrison-hhga	INDEL	D16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	77.9748	79.3985	76.6013	76.6697	528	137	586	179	170	94.9721
egarrison-hhga	INDEL	D16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	62.4864	45.7436	98.5612	50.3571	446	529	411	6	5	83.3333
egarrison-hhga	INDEL	D16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	88.5277	86.8852	90.2335	62.7373	424	64	425	46	39	84.7826
egarrison-hhga	INDEL	C16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
egarrison-hhga	INDEL	C16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het		0.0000	0.0000	0.0000	0	0	0	0	0

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