PrecisionFDA
Truth Challenge
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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry | Type | Subtype | Subset | Genotype | F-score | Recall | Precision | Frac_NA | Truth TP | Truth FN | Query TP | Query FP | FP gt | % FP ma | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
73701-73750 / 86044 show all | |||||||||||||||
gduggal-snapvard | INDEL | I6_15 | lowcmp_AllRepeats_gt200bp_gt95identity_merged | * | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
gduggal-snapvard | INDEL | I6_15 | lowcmp_AllRepeats_gt200bp_gt95identity_merged | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
gduggal-snapvard | INDEL | I6_15 | lowcmp_AllRepeats_gt200bp_gt95identity_merged | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
gduggal-snapvard | INDEL | I6_15 | lowcmp_AllRepeats_gt200bp_gt95identity_merged | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
gduggal-snapvard | INDEL | D1_5 | lowcmp_AllRepeats_gt200bp_gt95identity_merged | * | 59.2593 | 72.7273 | 50.0000 | 99.8444 | 8 | 3 | 2 | 2 | 2 | 100.0000 | |
gduggal-snapvard | INDEL | D1_5 | lowcmp_AllRepeats_gt200bp_gt95identity_merged | het | 63.6364 | 87.5000 | 50.0000 | 99.8246 | 7 | 1 | 2 | 2 | 2 | 100.0000 | |
gduggal-snapvard | INDEL | D1_5 | lowcmp_AllRepeats_gt200bp_gt95identity_merged | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 1 | 0 | 0 | 0 | |||
gduggal-snapvard | INDEL | D1_5 | lowcmp_AllRepeats_gt200bp_gt95identity_merged | homalt | 50.0000 | 100.0000 | 1 | 1 | 0 | 0 | 0 | ||||
gduggal-snapvard | INDEL | D6_15 | lowcmp_AllRepeats_gt200bp_gt95identity_merged | * | 57.1429 | 50.0000 | 66.6667 | 98.6364 | 3 | 3 | 2 | 1 | 0 | 0.0000 | |
gduggal-snapvard | INDEL | D6_15 | lowcmp_AllRepeats_gt200bp_gt95identity_merged | het | 66.6667 | 66.6667 | 66.6667 | 98.5646 | 2 | 1 | 2 | 1 | 0 | 0.0000 | |
gduggal-snapvard | INDEL | D6_15 | lowcmp_AllRepeats_gt200bp_gt95identity_merged | hetalt | 0.0000 | 50.0000 | 0.0000 | 0.0000 | 1 | 1 | 0 | 0 | 0 | ||
gduggal-snapvard | INDEL | D6_15 | lowcmp_AllRepeats_gt200bp_gt95identity_merged | homalt | 0.0000 | 100.0000 | 0 | 1 | 0 | 0 | 0 | ||||
gduggal-snapvard | INDEL | C1_5 | lowcmp_AllRepeats_gt200bp_gt95identity_merged | * | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
gduggal-snapvard | INDEL | C1_5 | lowcmp_AllRepeats_gt200bp_gt95identity_merged | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
gduggal-snapvard | INDEL | C1_5 | lowcmp_AllRepeats_gt200bp_gt95identity_merged | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
gduggal-snapvard | INDEL | C1_5 | lowcmp_AllRepeats_gt200bp_gt95identity_merged | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
gduggal-snapvard | INDEL | D16_PLUS | lowcmp_AllRepeats_gt200bp_gt95identity_merged | * | 0.0000 | 100.0000 | 0 | 4 | 0 | 0 | 0 | ||||
gduggal-snapvard | INDEL | D16_PLUS | lowcmp_AllRepeats_gt200bp_gt95identity_merged | het | 0.0000 | 100.0000 | 0 | 1 | 0 | 0 | 0 | ||||
gduggal-snapvard | INDEL | D16_PLUS | lowcmp_AllRepeats_gt200bp_gt95identity_merged | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 1 | 0 | 0 | 0 | |||
gduggal-snapvard | INDEL | D16_PLUS | lowcmp_AllRepeats_gt200bp_gt95identity_merged | homalt | 0.0000 | 100.0000 | 0 | 2 | 0 | 0 | 0 | ||||
gduggal-snapvard | INDEL | I1_5 | lowcmp_AllRepeats_gt200bp_gt95identity_merged | * | 0.0000 | 100.0000 | 0 | 1 | 0 | 0 | 0 | ||||
gduggal-snapvard | INDEL | I1_5 | lowcmp_AllRepeats_gt200bp_gt95identity_merged | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
gduggal-snapvard | INDEL | I1_5 | lowcmp_AllRepeats_gt200bp_gt95identity_merged | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 1 | 0 | 0 | 0 | |||
gduggal-snapvard | INDEL | I1_5 | lowcmp_AllRepeats_gt200bp_gt95identity_merged | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
gduggal-snapvard | INDEL | C6_15 | lowcmp_AllRepeats_gt200bp_gt95identity_merged | * | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
gduggal-snapvard | INDEL | C6_15 | lowcmp_AllRepeats_gt200bp_gt95identity_merged | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
gduggal-snapvard | INDEL | C6_15 | lowcmp_AllRepeats_gt200bp_gt95identity_merged | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
gduggal-snapvard | INDEL | C6_15 | lowcmp_AllRepeats_gt200bp_gt95identity_merged | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
gduggal-snapvard | INDEL | I16_PLUS | lowcmp_AllRepeats_gt200bp_gt95identity_merged | * | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
gduggal-snapvard | INDEL | I16_PLUS | lowcmp_AllRepeats_gt200bp_gt95identity_merged | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
gduggal-snapvard | INDEL | I16_PLUS | lowcmp_AllRepeats_gt200bp_gt95identity_merged | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
gduggal-snapvard | INDEL | I16_PLUS | lowcmp_AllRepeats_gt200bp_gt95identity_merged | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
hfeng-pmm1 | INDEL | D6_15 | lowcmp_AllRepeats_gt200bp_gt95identity_merged | * | 100.0000 | 100.0000 | 100.0000 | 96.4912 | 6 | 0 | 6 | 0 | 0 | ||
hfeng-pmm1 | INDEL | D6_15 | lowcmp_AllRepeats_gt200bp_gt95identity_merged | het | 100.0000 | 100.0000 | 100.0000 | 97.2477 | 3 | 0 | 3 | 0 | 0 | ||
hfeng-pmm1 | INDEL | D6_15 | lowcmp_AllRepeats_gt200bp_gt95identity_merged | hetalt | 100.0000 | 100.0000 | 100.0000 | 90.0000 | 2 | 0 | 2 | 0 | 0 | ||
hfeng-pmm1 | INDEL | D6_15 | lowcmp_AllRepeats_gt200bp_gt95identity_merged | homalt | 100.0000 | 100.0000 | 100.0000 | 97.6190 | 1 | 0 | 1 | 0 | 0 | ||
hfeng-pmm1 | INDEL | C6_15 | lowcmp_AllRepeats_gt200bp_gt95identity_merged | * | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
hfeng-pmm1 | INDEL | C6_15 | lowcmp_AllRepeats_gt200bp_gt95identity_merged | het | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
hfeng-pmm1 | INDEL | C6_15 | lowcmp_AllRepeats_gt200bp_gt95identity_merged | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
hfeng-pmm1 | INDEL | C6_15 | lowcmp_AllRepeats_gt200bp_gt95identity_merged | homalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
ghariani-varprowl | SNP | tv | lowcmp_AllRepeats_gt200bp_gt95identity_merged | * | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
ghariani-varprowl | SNP | tv | lowcmp_AllRepeats_gt200bp_gt95identity_merged | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
ghariani-varprowl | SNP | tv | lowcmp_AllRepeats_gt200bp_gt95identity_merged | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
ghariani-varprowl | SNP | tv | lowcmp_AllRepeats_gt200bp_gt95identity_merged | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
hfeng-pmm1 | INDEL | C16_PLUS | lowcmp_AllRepeats_gt200bp_gt95identity_merged | * | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
hfeng-pmm1 | INDEL | C16_PLUS | lowcmp_AllRepeats_gt200bp_gt95identity_merged | het | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
hfeng-pmm1 | INDEL | C16_PLUS | lowcmp_AllRepeats_gt200bp_gt95identity_merged | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
hfeng-pmm1 | INDEL | C16_PLUS | lowcmp_AllRepeats_gt200bp_gt95identity_merged | homalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
hfeng-pmm1 | INDEL | C1_5 | lowcmp_AllRepeats_gt200bp_gt95identity_merged | * | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
hfeng-pmm1 | INDEL | C1_5 | lowcmp_AllRepeats_gt200bp_gt95identity_merged | het | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 |