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Explore HG002 comparison results
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EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
73501-73550 / 86044 show all
gduggal-snapvardSNPtvlowcmp_AllRepeats_lt51bp_gt95identity_merged*
94.7665
97.0048
92.6291
69.2144
26849829265792115167
7.8960
gduggal-snapvardSNPtvlowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
93.0446
97.3019
89.1441
72.7080
17094474169572065141
6.8281
gduggal-snapvardSNPtvlowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
7.6923
0.0000
0.0000
112000
gduggal-snapvardSNPtvlowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
98.0218
96.6030
99.4830
58.8566
975434396225026
52.0000
ghariani-varprowlINDELC1_5lowcmp_AllRepeats_lt51bp_gt95identity_merged*
0.0000
66.6667
0.0000
0.0000
21000
ghariani-varprowlINDELC1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
0.0000
66.6667
0.0000
0.0000
21000
ghariani-varprowlINDELC1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardSNPtilowcmp_AllRepeats_lt51bp_gt95identity_merged*
91.8181
97.0493
87.1220
66.7143
27134825269663986179
4.4907
gduggal-snapvardSNPtilowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
88.6909
97.1990
81.5523
71.2536
17351500172633905147
3.7644
gduggal-snapvardSNPtilowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
16.6667
0.0000
0.0000
15000
gduggal-snapvardSNPtilowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
97.9882
96.8323
99.1721
49.4419
978232097038132
39.5062
ghariani-varprowlINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELC1_5lowcmp_AllRepeats_lt51bp_gt95identity_merged*
54.3265
100.0000
37.2933
91.2179
308571441188
13.0465
gduggal-snapvardINDELC1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
49.3757
100.0000
32.7807
90.9114
306921419174
12.2622
gduggal-snapvardINDELC1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELC1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
0.0000
0.0000
88.2353
93.6395
001652214
63.6364
gduggal-snapvardINDELD16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_merged*
5.1744
2.8363
29.4574
72.6502
1013460114273176
64.4689
gduggal-snapvardINDELD16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
9.1482
5.4613
28.1579
72.1408
741281107273176
64.4689
gduggal-snapvardINDELD16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
1.6229
0.0000
0.0000
211273000
gduggal-snapvardINDELD16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
1.3072
0.6579
100.0000
86.2745
6906700
gduggal-snapvardINDELD1_5lowcmp_AllRepeats_lt51bp_gt95identity_merged*
80.4680
83.0514
78.0406
69.2847
5351010920631201776115073
84.8657
gduggal-snapvardINDELD1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
83.2099
96.3623
73.2167
70.3492
320261209478611750814830
84.7041
gduggal-snapvardINDELD1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
66.9535
0.0000
0.0000
62243072000
gduggal-snapvardINDELD1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
81.5781
69.6835
98.3690
63.8094
15260663915259253243
96.0474
gduggal-snapvardINDELD6_15lowcmp_AllRepeats_lt51bp_gt95identity_merged*
59.1721
54.4401
64.8052
53.7673
87367311894748594228
87.0138
gduggal-snapvardINDELD6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
70.7753
78.9709
64.1209
53.4898
44201177861448204189
86.9087
gduggal-snapvardINDELD6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
56.7821
0.0000
0.0000
38682944000
gduggal-snapvardINDELD6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
21.6505
12.3145
89.5161
61.9632
44831903333939
100.0000
gduggal-snapvardINDELC6_15lowcmp_AllRepeats_lt51bp_gt95identity_merged*
56.8750
100.0000
39.7380
88.6830
1018227665
23.5507
gduggal-snapvardINDELC6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
55.2980
100.0000
38.2151
88.1796
1016727061
22.5926
gduggal-snapvardINDELC6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELC6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
0.0000
0.0000
71.4286
94.0000
001564
66.6667
gduggal-snapvardINDELI16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_merged*
0.6938
0.3506
33.1551
66.3366
4113712425096
38.4000
gduggal-snapvardINDELI16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
1.7852
0.9174
32.9730
66.4247
443212224894
37.9032
gduggal-snapvardINDELI16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
0583000
gduggal-snapvardINDELI16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
0.0000
0.0000
50.0000
55.5556
0122222
100.0000
gduggal-snapvardINDELI1_5lowcmp_AllRepeats_lt51bp_gt95identity_merged*
77.1368
72.0532
82.9923
72.5173
1122343534522592687975
86.0488
gduggal-snapvardINDELI1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
84.6909
92.5107
78.0901
74.9769
56454573275191897904
86.0159
gduggal-snapvardINDELI1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
58.8176
0.0000
0.0000
34922445000
gduggal-snapvardINDELI1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
74.0214
58.9765
99.3707
59.0788
20861451124747971
89.8734
gduggal-snapvardINDELI6_15lowcmp_AllRepeats_lt51bp_gt95identity_merged*
44.1015
42.1796
46.2069
48.7496
22413072355141343627
87.7358
gduggal-snapvardINDELI6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
55.8285
72.0960
45.5506
48.7100
1111430345041243618
87.7304
gduggal-snapvardINDELI6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
34.5303
0.0000
0.0000
10772042000
gduggal-snapvardINDELI6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
14.9034
8.1164
90.9910
51.3158
53600101109
90.0000
gduggal-snapplatINDEL*lowcmp_AllRepeats_lt51bp_gt95identity_merged*
67.1528
57.9879
79.7584
80.2389
547693968061674156524576
29.2359
gduggal-snapplatINDEL*lowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
65.4034
58.8863
73.5426
80.9801
284251984632333116321955
16.8071