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Explore HG002 comparison results
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EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
73151-73200 / 86044 show all
ckim-isaacINDELC1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELD1_5lowcmp_AllRepeats_lt51bp_gt95identity_merged*
96.4197
94.8503
98.0420
61.5230
611133318609871218972
79.8030
ckim-isaacINDELD1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
96.8145
96.7836
96.8455
61.4159
321671069317751035815
78.7440
ckim-isaacINDELD1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
93.3528
88.7263
98.4883
45.1727
824810488535131123
93.8931
ckim-isaacINDELD1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
97.0619
94.5157
99.7491
65.9214
206981201206775234
65.3846
ckim-isaacINDELD6_15lowcmp_AllRepeats_lt51bp_gt95identity_merged*
91.8499
88.8266
95.0863
43.5099
14254179314165732583
79.6448
ckim-isaacINDELD6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
90.3594
91.9064
88.8636
53.3705
51444534684587468
79.7274
ckim-isaacINDELD6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
92.6375
87.4780
98.4438
32.3935
5959853632610089
89.0000
ckim-isaacINDELD6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
92.2162
86.6135
98.5938
42.4667
315148731554526
57.7778
ckim-isaacINDELD16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_merged*
86.8178
81.4097
92.9955
56.2615
28996622881217142
65.4378
ckim-isaacINDELD16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
83.1246
82.0664
84.2105
65.4096
1112243896168107
63.6905
ckim-isaacINDELD16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
87.8990
80.2937
97.0958
47.6367
103925512373731
83.7838
ckim-isaacINDELD16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
89.4737
82.0175
98.4211
51.7154
748164748124
33.3333
ckim-gatkSNPtvlowcmp_AllRepeats_lt51bp_gt95identity_merged*
99.5094
99.6893
99.3302
65.3964
27592862758218618
9.6774
ckim-gatkSNPtvlowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
99.3819
99.8008
98.9665
67.1777
17533351752318315
8.1967
ckim-gatkSNPtvlowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
96.0000
92.3077
100.0000
83.3333
1211200
ckim-gatkSNPtvlowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
99.7369
99.5048
99.9701
61.6836
10047501004733
100.0000
ciseli-customINDELC1_5lowcmp_AllRepeats_lt51bp_gt95identity_merged*
29.0131
33.3333
25.6842
96.3865
1212235387
24.6459
ciseli-customINDELC1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
42.0382
33.3333
56.8966
98.7039
1233253
12.0000
ciseli-customINDELC1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ciseli-customINDELC1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
0.0000
0.0000
21.3429
95.1903
008932884
25.6098
ciseli-customINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_merged*
0.0000
0.0000
29.6296
96.2238
008198
42.1053
ciseli-customINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
0.0000
0.0000
33.3333
97.6378
00120
0.0000
ciseli-customINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ciseli-customINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
0.0000
0.0000
29.1667
95.9184
007178
47.0588
cchapple-customSNPtvlowcmp_AllRepeats_lt51bp_gt95identity_merged*
99.3227
99.7146
98.9339
60.9851
27599792765529824
8.0537
cchapple-customSNPtvlowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
99.0130
99.6869
98.3480
64.2091
17513551762229623
7.7703
cchapple-customSNPtvlowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
92.3077
0.0000
0.0000
121000
cchapple-customSNPtvlowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
99.8760
99.7722
99.9801
53.5072
10074231003321
50.0000
ciseli-customINDELD16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_merged*
51.3330
45.2682
59.2743
64.1063
16121949160111001012
92.0000
ciseli-customINDELD16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
64.5683
53.9483
80.3942
65.4232
731624775189165
87.3016
ciseli-customINDELD16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
3.8640
0.0000
0.0000
501244000
ciseli-customINDELD16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
62.4926
91.1184
47.5533
63.3312
83181826911847
92.9748
ciseli-customINDELD1_5lowcmp_AllRepeats_lt51bp_gt95identity_merged*
79.4183
79.5592
79.2778
75.7467
512601317051089133548419
63.0448
ciseli-customINDELD1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
86.5017
92.8720
80.9492
77.3758
3086623693128273623006
40.8313
ciseli-customINDELD1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
5.0237
0.0000
0.0000
4678829000
ciseli-customINDELD1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
83.2820
90.9950
76.7743
72.8145
1992719721980759925413
90.3371
ciseli-customINDELD6_15lowcmp_AllRepeats_lt51bp_gt95identity_merged*
50.1585
49.1836
51.1729
59.7079
78928154791975565150
68.1578
ciseli-customINDELD6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
67.2347
77.6447
59.2860
62.9451
43451251468332161125
34.9813
ciseli-customINDELD6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
4.3012
0.0000
0.0000
2936519000
ciseli-customINDELD6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
57.8173
89.4447
42.7138
55.6700
3254384323643404025
92.7419
ciseli-customINDELC6_15lowcmp_AllRepeats_lt51bp_gt95identity_merged*
35.5556
100.0000
21.6216
96.1973
10248722
25.2874
ciseli-customINDELC6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
72.0000
100.0000
56.2500
97.9408
10970
0.0000
ciseli-customINDELC6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ciseli-customINDELC6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
0.0000
0.0000
15.7895
95.5649
00158022
27.5000
ciseli-customINDEL*lowcmp_AllRepeats_lt51bp_gt95identity_merged*
73.7262
74.1156
73.3408
74.2090
7000024447701712550716983
66.5817
ciseli-customINDEL*lowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
82.0846
86.7638
77.8844
75.9358
41880638942785121495113
42.0858
ciseli-customINDEL*lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
4.2940
0.0000
0.0000
66214755000
ciseli-customINDEL*lowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
76.6853
89.2624
67.2148
71.4466
274583303273861335811870
88.8606