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Explore HG002 comparison results

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Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1459 1460 1461 1462 1463 1464 1465 1466 1467 ... 1720 1721 » 73101-73150 / 86044 show all
ckim-dragen	INDEL	I1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	98.6173	97.7724	99.4771	72.6068	15230	347	15218	80	60	75.0000
ckim-dragen	INDEL	I1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	99.4656	99.3773	99.5540	78.3693	6064	38	6027	27	7	25.9259
ckim-dragen	INDEL	I1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	97.3380	94.8299	99.9823	61.6765	5631	307	5659	1	1	100.0000
ckim-dragen	INDEL	I1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	99.2414	99.9435	98.5491	72.6182	3535	2	3532	52	52	100.0000
ckim-gatk	INDEL	I1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	98.2509	96.9956	99.5391	72.8687	15109	468	15117	70	47	67.1429
ckim-gatk	INDEL	I1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	99.4251	99.4428	99.4073	78.7466	6068	34	6038	36	13	36.1111
ckim-gatk	INDEL	I1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	96.2182	92.7585	99.9459	61.2554	5508	430	5546	3	3	100.0000
ckim-gatk	INDEL	I1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	99.5071	99.8869	99.1302	72.7419	3533	4	3533	31	31	100.0000
ckim-gatk	INDEL	D1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	99.3055	99.0812	99.5308	74.4619	63839	592	63852	301	259	86.0465
ckim-gatk	INDEL	D1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	99.6452	99.7262	99.5644	75.3068	33145	91	33139	145	104	71.7241
ckim-gatk	INDEL	D1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	97.1124	94.7719	99.5714	64.0050	8810	486	8829	38	38	100.0000
ckim-gatk	INDEL	D1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	99.6970	99.9315	99.4637	76.0277	21884	15	21884	118	117	99.1525
ckim-gatk	INDEL	D6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	98.3167	98.0869	98.5475	60.4971	15740	307	15741	232	216	93.1034
ckim-gatk	INDEL	D6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	98.6238	99.4640	97.7977	72.6194	5567	30	5551	125	111	88.8000
ckim-gatk	INDEL	D6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	97.7140	95.9777	99.5142	33.0521	6538	274	6555	32	32	100.0000
ckim-gatk	INDEL	D6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	98.9385	99.9175	97.9784	62.3961	3635	3	3635	75	73	97.3333
ckim-gatk	INDEL	I16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	96.5329	95.0920	98.0180	79.6517	1085	56	1088	22	17	77.2727
ckim-gatk	INDEL	I16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	96.9562	96.3303	97.5904	85.6699	420	16	405	10	5	50.0000
ckim-gatk	INDEL	I16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	96.3739	93.3105	99.6454	63.1854	544	39	562	2	2	100.0000
ckim-gatk	INDEL	I16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	95.6522	99.1803	92.3664	87.2444	121	1	121	10	10	100.0000
ckim-gatk	SNP	*	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	99.5960	99.7232	99.4692	61.2535	55477	154	55466	296	29	9.7973
ckim-gatk	SNP	*	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	99.4847	99.7826	99.1887	63.5467	35342	77	35331	289	22	7.6125
ckim-gatk	SNP	*	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	96.0000	92.3077	100.0000	83.3333	12	1	12	0	0
ckim-gatk	SNP	*	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	99.7942	99.6237	99.9652	56.3615	20123	76	20123	7	7	100.0000
ckim-gatk	SNP	ti	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	99.6801	99.7532	99.6071	56.0538	27890	69	27889	110	11	10.0000
ckim-gatk	SNP	ti	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	99.5862	99.7647	99.4083	59.0715	17809	42	17808	106	7	6.6038
ckim-gatk	SNP	ti	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	90.9091	83.3333	100.0000	88.3721	5	1	5	0	0
ckim-gatk	SNP	ti	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	99.8514	99.7426	99.9603	49.3467	10076	26	10076	4	4	100.0000
ckim-gatk	INDEL	I6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	97.5789	95.9353	99.2797	63.8316	5098	216	5100	37	30	81.0811
ckim-gatk	INDEL	I6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	99.0504	98.6372	99.4670	77.6637	1520	21	1493	8	2	25.0000
ckim-gatk	INDEL	I6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	96.7267	93.7500	99.8985	40.2385	2925	195	2954	3	3	100.0000
ckim-gatk	INDEL	I6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	98.0480	100.0000	96.1708	73.2150	653	0	653	26	25	96.1538
ckim-gatk	INDEL	D16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	98.2889	98.3993	98.1788	72.3290	3504	57	3504	65	45	69.2308
ckim-gatk	INDEL	D16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	97.9160	99.5572	96.3281	83.1889	1349	6	1233	47	30	63.8298
ckim-gatk	INDEL	D16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	97.8234	96.2133	99.4883	36.4312	1245	49	1361	7	7	100.0000
ckim-gatk	INDEL	D16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	99.2908	99.7807	98.8056	70.5939	910	2	910	11	8	72.7273
ckim-isaac	INDEL	C6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	0.0000	100.0000	0.0000	0.0000	1	0	0	0	0
ckim-isaac	INDEL	C6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	0.0000	100.0000	0.0000	0.0000	1	0	0	0	0
ckim-isaac	INDEL	C6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	*	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	94.4269	92.1672	96.8002	61.2699	87051	7398	86368	2855	2059	72.1191
ckim-isaac	INDEL	*	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	94.7847	94.6676	94.9020	63.1937	45697	2574	44659	2399	1704	71.0296
ckim-isaac	INDEL	*	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	91.1346	84.9322	98.3142	43.5277	13094	2323	13472	231	203	87.8788
ckim-isaac	INDEL	*	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	95.3986	91.8696	99.2095	63.6282	28260	2501	28237	225	152	67.5556
ckim-isaac	INDEL	C16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*		0.0000	0.0000	0.0000	0	3	0	0	0
ckim-isaac	INDEL	C1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het		0.0000	0.0000	0.0000	0	3	0	0	0

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